Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema3fb

Gene Name Gene ID Reads Annotation
sema3fb ENSDARG00000055373 834 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]










Genes with expression patterns similar to sema3fb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3fb ENSDARG00000055373 834 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
2. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 2.542 - 0.832 0.982 0.728 - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
3. ercc5 ENSDARG00000023678 468 1.845 - - 0.989 0.856 - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
4. cant1a ENSDARG00000012192 1324 1.814 - - 0.954 0.860 - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
5. yeats4 ENSDARG00000045874 1168 1.796 - - 0.982 0.814 - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
6. mxra8b ENSDARG00000062129 1004 1.703 0.709 - 0.994 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
7. hipk3b ENSDARG00000062082 1248 1.701 - - 0.991 0.710 - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
8. CCDC86 CCDC86 2023 1.677 0.703 - 0.974 - - - - - -
9. lmna ENSDARG00000013415 1562 1.628 - - 0.928 - - - 0.700 - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
10. rad17 ENSDARG00000018918 332 1.615 - 0.773 - 0.842 - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
11. CABZ01045618.2 CABZ01045618.2 1663 1.542 - 0.773 - 0.769 - - - - -
12. hs2st1a ENSDARG00000099478 864 1.523 - 0.753 - 0.770 - - - - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
13. arntl1a ENSDARG00000006791 550 1.52 - - - 0.747 - - 0.773 - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
14. tceb1a 969 1.479 - 0.746 - - - - 0.733 - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
15. zgc:174160 484 1.475 - 0.761 - 0.714 - - - - - zgc:174160, transcript variant X1
16. egln1 egln1 3746 1.461 - 0.759 - - - - 0.702 - -
17. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 1.458 - 0.708 - 0.750 - - - - - ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
18. HAP1 HAP1 481 1.456 0.754 0.702 - - - - - - -
19. sptlc3 ENSDARG00000030743 596 0.995 - - 0.995 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
20. CR855996.2 ENSDARG00000104450 310 0.994 - - 0.994 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
21. ndufa4l2 153 0.994 - - 0.994 - - - - - - NDUFA4, mitochondrial complex associated like 2
22. si:ch211-173m16.2 ENSDARG00000093284 186 0.994 - - 0.994 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
23. CABZ01008011.1 CABZ01008011.1 761 0.994 - - 0.994 - - - - - -
24. ZNHIT6 ENSDARG00000095817 355 0.994 - - 0.994 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
25. si:dkey-220k22.3 ENSDARG00000094693 166 0.994 - - 0.994 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
26. si:dkey-54g2.6 si:dkey-54g2.6 252 0.994 - - 0.994 - - - - - -
27. c1ql3a ENSDARG00000010350 179 0.994 - - 0.994 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
28. CR382281.1 ENSDARG00000100098 135 0.994 - - 0.994 - - - - - -
29. wnt10a ENSDARG00000017155 491 0.993 - - 0.993 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
30. mbtps2 ENSDARG00000057577 1285 0.993 - - 0.993 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
31. tbc1d10a tbc1d10a 462 0.993 - - 0.993 - - - - - -
32. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.992 - - 0.992 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
33. prdm1a ENSDARG00000002445 1340 0.992 - - 0.992 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
34. gnb1a ENSDARG00000090454 481 0.992 - - 0.992 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
35. npdc1 npdc1 221 0.992 - - 0.992 - - - - - -
36. tmco4 ENSDARG00000078924 330 0.992 - - 0.992 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
37. ralba ENSDARG00000040778 1574 0.992 - - 0.992 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
38. mark2a ENSDARG00000079905 1765 0.991 - - 0.991 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
39. smpd1 ENSDARG00000076121 584 0.991 - - 0.991 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
40. si:dkey-92i15.4 ENSDARG00000078387 428 0.991 - - 0.991 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
41. ppp1r14c ENSDARG00000077341 1587 0.99 - - 0.990 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
42. angptl2b ENSDARG00000068369 1705 0.99 - - 0.990 - - - - - - angiopoietin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050624-1]
43. GIT1 ENSDARG00000039489 1157 0.99 - - 0.990 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
44. PTDSS2 ENSDARG00000101018 881 0.99 - - 0.990 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
45. itsn1 ENSDARG00000000086 684 0.99 - - 0.990 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
46. MAP4_1 MAP4_1 1153 0.99 - - 0.990 - - - - - -
47. dnajc3 dnajc3 802 0.99 - - 0.990 - - - - - -
48. tmbim1 tmbim1 1005 0.99 - - 0.990 - - - - - -
49. hint3 ENSDARG00000074286 1015 0.989 - - 0.989 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
50. BX571715.2 BX571715.2 1316 0.989 - - 0.989 - - - - - -
51. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.988 - - 0.988 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
52. stk38a ENSDARG00000019973 1343 0.988 - - 0.988 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
53. slc2a10 ENSDARG00000090820 637 0.988 - - 0.988 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
54. edc3 ENSDARG00000051931 780 0.988 - - 0.988 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
55. ehd1a ENSDARG00000098853 1092 0.988 - - 0.988 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
56. si:ch211-250c4.3 si:ch211-250c4.3 677 0.988 - - 0.988 - - - - - -
57. apip ENSDARG00000003132 1212 0.988 - - 0.988 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
58. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.988 - - 0.988 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
59. pvrl2l ENSDARG00000063390 1112 0.988 - - 0.988 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
60. tbc1d12a ENSDARG00000038237 698 0.987 - - 0.987 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
61. galnt1 ENSDARG00000061335 1648 0.987 - - 0.987 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
62. FBXW7 ENSDARG00000060994 1675 0.987 - - 0.987 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
63. twist3 ENSDARG00000019646 1221 0.986 - - 0.986 - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
64. TIFA TIFA 1519 0.985 - - 0.985 - - - - - -
65. tiprl ENSDARG00000032353 1045 0.985 - - 0.985 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
66. clic1 ENSDARG00000103340 2235 0.985 - - 0.985 - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
67. hdac4 ENSDARG00000098349 1370 0.985 - - 0.985 - - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
68. dctn3 ENSDARG00000041363 3351 0.984 - - 0.984 - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
69. lgals3l lgals3l 3833 0.984 - - 0.984 - - - - - -
70. mapk12a ENSDARG00000042021 1573 0.984 - - 0.984 - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
71. elovl7b ENSDARG00000100185 2032 0.984 - - 0.984 - - - - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
72. il17rd ENSDARG00000098359 1153 0.984 - - 0.984 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
73. AIFM2 ENSDARG00000077549 1419 0.984 - - 0.984 - - - - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
74. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.983 - - 0.983 - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
75. prpf4ba ENSDARG00000008784 936 0.982 - - 0.982 - - - - - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
76. esf1 ENSDARG00000008740 1206 0.982 - - 0.982 - - - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
77. ikbkg ENSDARG00000017037 1225 0.982 - - 0.982 - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
78. LIMD1 LIMD1 1306 0.981 - - 0.981 - - - - - -
79. zgc:56585 ENSDARG00000026236 704 0.981 - - 0.981 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
80. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 0.981 - - 0.981 - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
81. dnajc10 ENSDARG00000074727 1523 0.98 - - 0.980 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
82. FP236812.4 FP236812.4 1244 0.98 - - 0.980 - - - - - -
83. abcg2c ENSDARG00000058574 1261 0.98 - - 0.980 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
84. bcl2l10 ENSDARG00000026766 1426 0.979 - - 0.979 - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
85. srp14 ENSDARG00000115987 3575 0.979 - - 0.979 - - - - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
86. C2CD2 ENSDARG00000105000 2573 0.978 - - 0.978 - - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
87. lpar1 ENSDARG00000099840 2010 0.976 - - 0.976 - - - - - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
88. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 0.975 - - 0.975 - - - - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
89. anapc10 ENSDARG00000090152 1406 0.974 - - 0.974 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
90. sf3a2 ENSDARG00000021107 2929 0.974 - - 0.974 - - - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
91. kif2c ENSDARG00000076228 2281 0.973 - - 0.973 - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
92. TMEM87A TMEM87A 2407 0.973 - - 0.973 - - - - - -
93. brd7 ENSDARG00000008380 3654 0.973 - - 0.973 - - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
94. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 0.972 - - 0.972 - - - - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
95. yipf5 ENSDARG00000007279 2334 0.972 - - 0.972 - - - - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
96. BX855614.1 ENSDARG00000094551 1294 0.972 - - 0.972 - - - - - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
97. phgdh ENSDARG00000001873 8325 0.972 - - 0.972 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
98. arpc5a ENSDARG00000039142 5482 0.972 - - 0.972 - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
99. mrps33 ENSDARG00000020015 3551 0.972 - - 0.972 - - - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
100. TMEM54 TMEM54 1882 0.971 - - 0.971 - - - - - -

There are 685 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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