Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sema3e

Gene Name Gene ID Reads Annotation
sema3e ENSDARG00000036571, ENSDARG00000116446 115 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]










Genes with expression patterns similar to sema3e

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3e ENSDARG00000036571, ENSDARG00000116446 115 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
2. cyp2r1 ENSDARG00000056587 84 2.43 - - - - 0.772 0.835 0.823 - - cytochrome P450, family 2, subfamily R, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-110114-1]
3. si:dkey-32e6.3 ENSDARG00000092934 133 1.862 - - - - 0.964 0.898 - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
4. ogfrl1 ENSDARG00000061223 64 1.847 - 0.852 - - 0.995 - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
5. BX510922.1 ENSDARG00000101184 147 1.845 - - - - 0.931 0.914 - - -
6. cox4i1l ENSDARG00000012388 584 1.818 - 0.957 - - 0.861 - - - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
7. zgc:113317 zgc:113317 14 1.762 - - - - - 0.915 0.847 - -
8. MMP15 MMP15 88 1.749 - 0.890 - - - - 0.859 - -
9. si:ch211-207c7.6 si:ch211-207c7.6 23 1.746 - 0.987 0.759 - - - - - -
10. CU638695.1 CU638695.1 90 1.717 - - - - 0.846 - 0.871 - -
11. rdh12l ENSDARG00000045277 139 1.696 - - - - - 0.901 0.795 - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
12. PKP3 PKP3 391 1.683 - 0.830 - - - 0.853 - - -
13. g6pca.1 ENSDARG00000031616 401 1.68 - - - - 0.950 0.730 - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
14. dnph1 ENSDARG00000075730 403 1.656 - 0.807 - - 0.849 - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
15. CU929089.1 CU929089.1 479 1.651 - 0.710 - - - 0.941 - - -
16. hnf4g ENSDARG00000071565 117 1.649 - 0.747 - - 0.902 - - - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
17. INHBE INHBE 95 1.641 0.799 - - - - 0.842 - - -
18. DRD5 DRD5 142 1.629 - - - - - 0.863 0.766 - -
19. BX569778.1 BX569778.1 36 1.628 - - - - - 0.891 0.737 - -
20. PEG3_11 PEG3_11 167 1.626 - 0.750 - - - - 0.876 - -
21. si:dkey-204f11.64 ENSDARG00000094695 586 1.603 - - - - 0.786 0.817 - - - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
22. tmem79b ENSDARG00000076861 154 1.589 - 0.870 - - - - 0.719 - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
23. b3gnt3.3 ENSDARG00000093521 430 1.588 - 0.751 - - - 0.837 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
24. arsg ENSDARG00000101715 57 1.586 - 0.831 - - - - 0.755 - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
25. ZNF414 ENSDARG00000079229 846 1.582 - 0.792 - - - - 0.790 - - zinc finger protein 414 [Source:ZFIN;Acc:ZDB-GENE-070912-571]
26. CR931813.1 ENSDARG00000103293 84 1.58 - 0.774 - - - 0.806 - - -
27. ptx3a ENSDARG00000068275 589 1.553 - - - - 0.829 0.724 - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
28. usp44 ENSDARG00000089861 1532 1.529 0.739 0.790 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
29. skap2 ENSDARG00000000906 146 1.526 - 0.805 - - - - 0.721 - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
30. cyp2aa9 ENSDARG00000098890 839 1.514 - - - - 0.740 0.774 - - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
31. si:ch211-120e1.6 si:ch211-120e1.6 292 1.509 0.755 - - - - 0.754 - - -
32. pcyt1ab ENSDARG00000004492 386 1.496 - - - - - 0.713 0.783 - - phosphate cytidylyltransferase 1, choline, alpha b [Source:ZFIN;Acc:ZDB-GENE-050522-114]
33. cables2b ENSDARG00000017154 131 1.462 - 0.716 - - - 0.746 - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
34. macrod2 ENSDARG00000032601 393 1.452 0.707 0.745 - - - - - - - MACRO domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1490]
35. FOCAD ENSDARG00000022020 550 1.451 - - - - - 0.730 0.721 - - focadhesin [Source:ZFIN;Acc:ZDB-GENE-080213-1]
36. smyd4 ENSDARG00000060983 106 1.427 - 0.727 - - - - 0.700 - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
37. zgc:109934 ENSDARG00000094210, ENSDARG00000113150 398 1.422 - 0.707 - - - 0.715 - - - zgc:109934 [Source:ZFIN;Acc:ZDB-GENE-050522-428]
38. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 1 - 1.000 - - - - - - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
39. KCNJ12 KCNJ12 17 0.999 - - - - 0.999 - - - -
40. pglyrp2 ENSDARG00000062998 11 0.999 - - - - 0.999 - - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
41. lrrtm4l1 ENSDARG00000080015 9 0.999 - - - - 0.999 - - - - leucine rich repeat transmembrane neuronal 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-080327-15]
42. CU184872.1 CU184872.1 15 0.999 - - - - 0.999 - - - -
43. GRAMD2_1 GRAMD2_1 12 0.999 - - - - 0.999 - - - -
44. CABZ01117977.1 CABZ01117977.1 9 0.999 - - - - 0.999 - - - -
45. U3_5 U3_5 67 0.995 - - - - 0.995 - - - -
46. si:ch211-218c6.9 si:ch211-218c6.9 40 0.995 - - - - 0.995 - - - -
47. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.995 - - - - 0.995 - - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
48. abhd13 ENSDARG00000059209 43 0.993 - - - - 0.993 - - - - abhydrolase domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-051120-54]
49. si:dkey-253a1.2 si:dkey-253a1.2 52 0.992 - - - - 0.992 - - - -
50. colm colm 36 0.991 - - - - 0.991 - - - -
51. si:dkey-7e14.3 ENSDARG00000086055 50 0.99 - - - - 0.990 - - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
52. wu:fi34b01 38 0.989 - - - - 0.989 - - - - wu:fi34b01
53. mlpha ENSDARG00000070991, ENSDARG00000112518, ENSDARG00000114121 198 0.987 - - - - 0.987 - - - - melanophilin a [Source:ZFIN;Acc:ZDB-GENE-050208-724]
54. slc12a10.2 ENSDARG00000071173 92 0.987 - 0.987 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
55. si:ch211-102c2.4 ENSDARG00000079387 101 0.987 - - - - 0.987 - - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
56. ASAP1 ASAP1 47 0.985 - - - - 0.985 - - - -
57. zgc:111868 ENSDARG00000099060 68 0.985 - - - - - 0.985 - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
58. herc3 ENSDARG00000075887 41 0.98 - - - - 0.980 - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
59. CU694368.1 CU694368.1 56 0.979 - - - - 0.979 - - - -
60. gadd45aa ENSDARG00000043581 114 0.976 - - - - 0.976 - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
61. CABZ01054962.1 CABZ01054962.1 91 0.974 - - - - 0.974 - - - -
62. slc9a3.1 ENSDARG00000058498 46 0.972 - - - - 0.972 - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
63. si:ch211-135f11.1 166 0.972 - - - - 0.972 - - - - si:ch211-135f11.1, transcript variant X3
64. SLC16A3 ENSDARG00000045051 83 0.969 - - - - 0.969 - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
65. si:ch211-198d23.1 ENSDARG00000092574 104 0.968 - - - - - 0.968 - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
66. tmprss13b ENSDARG00000077573 47 0.965 - 0.965 - - - - - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
67. si:dkey-189o20.1 si:dkey-189o20.1 47 0.964 - - - - 0.964 - - - -
68. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 0.962 - - - - 0.962 - - - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
69. gphnb ENSDARG00000100851 118 0.959 - - - - 0.959 - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
70. fam5ca fam5ca 76 0.959 - - - - 0.959 - - - -
71. MPP3_1 MPP3_1 88 0.955 - - - - 0.955 - - - -
72. MFAP4_7 MFAP4_7 43 0.955 - - - - 0.955 - - - -
73. CU681846.1 CU681846.1 86 0.954 - - - - 0.954 - - - -
74. slx4 ENSDARG00000061414, ENSDARG00000093798 44 0.953 - - - - 0.953 - - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
75. SETD9 ENSDARG00000074456 66 0.95 - - - - 0.950 - - - - SET domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-120727-15]
76. PEG3_10 PEG3_10 45 0.947 - - - - 0.947 - - - -
77. dyx1c1 dyx1c1 36 0.946 - 0.946 - - - - - - -
78. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.946 - 0.946 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
79. SYTL1 ENSDARG00000070094 282 0.941 - - - - 0.941 - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
80. ZNF337_7 ZNF337_7 198 0.94 - - - - 0.940 - - - -
81. aarsd1 ENSDARG00000015747 145 0.94 - - - - 0.940 - - - - alanyl-tRNA synthetase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-91]
82. SLC16A13 ENSDARG00000055342 183 0.939 - - - - 0.939 - - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
83. ugt2b6 ugt2b6 111 0.938 - 0.938 - - - - - - -
84. CU467646.3 ENSDARG00000099076 36 0.937 - 0.937 - - - - - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
85. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 0.937 - - - - 0.937 - - - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
86. med18 ENSDARG00000041237 247 0.935 - - - - 0.935 - - - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
87. lrrc4.2 ENSDARG00000003020 235 0.935 - - - - 0.935 - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
88. si:ch211-126i22.5 ENSDARG00000060911 209 0.933 - - - - - 0.933 - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
89. TDRD7B ENSDARG00000077523 124 0.933 - - - - 0.933 - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
90. fbxo32 ENSDARG00000040277 93 0.932 - 0.932 - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
91. dlx2a ENSDARG00000079964 1253 0.931 - - - - - 0.931 - - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
92. lhx2b ENSDARG00000031222 517 0.931 - - - - - 0.931 - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
93. htra1b ENSDARG00000014907 146 0.931 - - - - - 0.931 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
94. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.931 - - - - 0.931 - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
95. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 0.93 - - - - - 0.930 - - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
96. ccr8.1 ENSDARG00000095789 14 0.929 - - - - - 0.929 - - - chemokine (C-C motif) receptor 8.1 [Source:ZFIN;Acc:ZDB-GENE-070302-1]
97. si:ch73-211l2.3 ENSDARG00000075932 4 0.929 - - - - - 0.929 - - - si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
98. mcm5_2 ENSDARG00000019507 66 0.928 - - - - - 0.928 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
99. GBF1 ENSDARG00000027016 30 0.928 - - - - - 0.928 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
100. il11b ENSDARG00000058557 17 0.928 - - - - - 0.928 - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]

There are 1050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA