Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema3d

Gene Name Gene ID Reads Annotation
sema3d ENSDARG00000017369 212 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]










Genes with expression patterns similar to sema3d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3d ENSDARG00000017369 212 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
2. ugt5b4 ENSDARG00000091916 130 1.877 0.971 0.906 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
3. fam155a ENSDARG00000075858 91 1.809 0.971 0.838 - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
4. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.768 0.960 0.808 - - - - - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
5. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 1.758 0.897 0.861 - - - - - - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
6. sh3yl1 ENSDARG00000074393 815 1.73 0.934 0.796 - - - - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
7. arhgap19 ENSDARG00000083189 210 1.728 0.970 0.758 - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
8. ap3m2 ENSDARG00000016128 851 1.723 0.859 0.864 - - - - - - - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
9. wdr35 ENSDARG00000069269 492 1.698 0.957 - - - - 0.741 - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
10. si:ch211-157l15.4 si:ch211-157l15.4 92 1.692 0.972 - - - - - 0.720 - -
11. iah1 ENSDARG00000015765 326 1.658 0.951 0.707 - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
12. rnf170 ENSDARG00000104069 838 1.627 0.897 - - - - 0.730 - - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
13. ret ENSDARG00000055305 700 1.617 0.897 0.720 - - - - - - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
14. BX649494.1 BX649494.1 195 1.597 - 0.727 - - - - 0.870 - -
15. si:ch211-191i18.2 ENSDARG00000070141 1164 1.566 - 0.791 - - - - 0.775 - - si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]
16. CABZ01069022.1 ENSDARG00000105692 16 1.563 - 0.843 - - - - 0.720 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
17. ptprja ENSDARG00000033042 25 1.54 - 0.820 - - - - 0.720 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
18. fam208b ENSDARG00000074168 2244 1.537 0.832 - - - - 0.705 - - - family with sequence similarity 208, member B [Source:ZFIN;Acc:ZDB-GENE-041111-225]
19. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.537 0.802 - - - - 0.735 - - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
20. mapk9 ENSDARG00000077364 38 1.5 - 0.780 - - - - 0.720 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
21. PAMR1 ENSDARG00000093480 40 1.479 - - - - 0.759 - 0.720 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
22. slc44a1a ENSDARG00000015946 10 1.435 - - - - - - 0.720 - 0.715 solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
23. asb1 ENSDARG00000026635 166 1.428 - 0.703 - - - - - - 0.725 ankyrin repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-234]
24. wnt10a ENSDARG00000017155 491 0.978 0.978 - - - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
25. arglu1b ENSDARG00000018319 1110 0.976 0.976 - - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
26. hyi ENSDARG00000030166 1199 0.975 0.975 - - - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
27. siae ENSDARG00000040527, ENSDARG00000111850 186 0.973 0.973 - - - - - - - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
28. si:ch211-270n8.3 87 0.972 0.972 - - - - - - - - si:ch211-270n8.3, transcript variant X2
29. PTPDC1 PTPDC1 30 0.972 0.972 - - - - - - - -
30. brap ENSDARG00000008560 821 0.972 0.972 - - - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
31. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.972 0.972 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
32. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.972 0.972 - - - - - - - -
33. swt1 ENSDARG00000094010 472 0.971 0.971 - - - - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
34. pycr1 pycr1 1258 0.971 0.971 - - - - - - - -
35. pdrg1 ENSDARG00000045017 628 0.971 0.971 - - - - - - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
36. trim25l ENSDARG00000020863 292 0.971 0.971 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
37. map2k1 ENSDARG00000007825 373 0.97 0.970 - - - - - - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
38. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.97 0.970 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
39. gdap1l1 ENSDARG00000028628 233 0.97 0.970 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
40. ACOT12 ENSDARG00000054534 61 0.97 0.970 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
41. chmp3 ENSDARG00000038064 577 0.969 0.969 - - - - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
42. C2H7orf25 C2H7orf25 209 0.969 0.969 - - - - - - - -
43. pdk1 ENSDARG00000013128 526 0.969 0.969 - - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
44. si:dkey-178e17.3 ENSDARG00000058658 271 0.969 0.969 - - - - - - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
45. actr5 ENSDARG00000098235 237 0.969 0.969 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
46. CARKD 1398 0.969 0.969 - - - - - - - - carbohydrate kinase domain containing, transcript variant X7
47. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.968 0.968 - - - - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
48. prickle1a ENSDARG00000040649 700 0.967 0.967 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
49. NFRKB ENSDARG00000091512 646 0.967 0.967 - - - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
50. FP102272.1 FP102272.1 9473 0.967 0.967 - - - - - - - -
51. EPS8L2 ENSDARG00000058108 484 0.967 0.967 - - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
52. thap4 ENSDARG00000077323 434 0.966 0.966 - - - - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
53. marveld2b ENSDARG00000061651 459 0.965 - 0.965 - - - - - - - MARVEL domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-050208-54]
54. ap5s1 ENSDARG00000076755 318 0.965 0.965 - - - - - - - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
55. efnb2b ENSDARG00000074050 77 0.964 0.964 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
56. fam129ba ENSDARG00000062970 1578 0.964 0.964 - - - - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
57. bub1 ENSDARG00000077029 634 0.964 0.964 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
58. lzic ENSDARG00000055899 638 0.964 0.964 - - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
59. ing5a ENSDARG00000022413 268 0.964 0.964 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
60. zgc:92313 ENSDARG00000040513 790 0.964 0.964 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
61. vps11 ENSDARG00000036338 421 0.964 0.964 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
62. si:ch211-264e16.1 ENSDARG00000068947 1358 0.964 0.964 - - - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
63. rhogb ENSDARG00000004301 358 0.963 0.963 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
64. cib1 ENSDARG00000103118 291 0.963 0.963 - - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
65. osgn1 ENSDARG00000052279 5607 0.962 0.962 - - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
66. chpf2 ENSDARG00000059961 679 0.962 0.962 - - - - - - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
67. rhov ENSDARG00000070434 808 0.961 0.961 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
68. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.961 0.961 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
69. bcl3 ENSDARG00000087832 69 0.96 0.960 - - - - - - - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
70. si:dkey-238o13.4 ENSDARG00000078847 884 0.959 0.959 - - - - - - - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
71. BICD2 ENSDARG00000075571 401 0.959 0.959 - - - - - - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
72. plk2b ENSDARG00000019130, ENSDARG00000111402 328 0.959 0.959 - - - - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
73. kif1b ENSDARG00000037020 2124 0.958 0.958 - - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
74. ptpn21 ENSDARG00000062248 2010 0.958 0.958 - - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
75. C6H6orf106 C6H6orf106 2940 0.957 0.957 - - - - - - - -
76. si:ch211-254c8.2 233 0.957 0.957 - - - - - - - - si:ch211-254c8.2, transcript variant X4
77. c7a ENSDARG00000042172 716 0.956 0.956 - - - - - - - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
78. miox ENSDARG00000002764 588 0.956 0.956 - - - - - - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
79. si:ch1073-322p19.1 ENSDARG00000075173 204 0.955 0.955 - - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]
80. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.955 0.955 - - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
81. clic1 ENSDARG00000103340 2235 0.955 0.955 - - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
82. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.955 0.955 - - - - - - - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
83. grp ENSDARG00000043074 747 0.954 0.954 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
84. gla ENSDARG00000036155, ENSDARG00000110713 228 0.954 0.954 - - - - - - - - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
85. znf296 ENSDARG00000077897 658 0.954 0.954 - - - - - - - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
86. cpsf5 cpsf5 1841 0.953 0.953 - - - - - - - -
87. ssfa2 340 0.952 0.952 - - - - - - - - sperm specific antigen 2, transcript variant X2
88. ube3c ENSDARG00000035978, ENSDARG00000112229 787 0.952 0.952 - - - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
89. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 0.952 0.952 - - - - - - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
90. plcd3a ENSDARG00000052957 467 0.951 0.951 - - - - - - - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
91. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.951 0.951 - - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
92. CLDN10_1 CLDN10_1 71 0.95 0.950 - - - - - - - -
93. eva1ba ENSDARG00000102701 1480 0.95 0.950 - - - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
94. wnt6b ENSDARG00000073935 236 0.95 0.950 - - - - - - - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
95. zgc:110626 ENSDARG00000053159 1124 0.95 0.950 - - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
96. C11H19orf25 C11H19orf25 491 0.95 0.950 - - - - - - - -
97. tax1bp3 ENSDARG00000059177 4324 0.95 0.950 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
98. CU655970.1 CU655970.1 2123 0.95 0.950 - - - - - - - -
99. si:ch211-218c6.8 ENSDARG00000092364 1270 0.949 0.949 - - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
100. dnajc27 ENSDARG00000070916 530 0.949 0.949 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]

There are 1059 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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