Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema3c

Gene Name Gene ID Reads Annotation
sema3c ENSDARG00000034300 881 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]










Genes with expression patterns similar to sema3c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3c ENSDARG00000034300 881 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
2. prdm8 ENSDARG00000025017 370 3.346 0.812 0.817 - - - 0.875 0.842 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
3. CABZ01028287.1 CABZ01028287.1 626 3.146 0.771 0.760 - - - 0.771 0.844 - -
4. pkd1b ENSDARG00000033029 461 3.06 0.746 0.852 - - - 0.711 0.751 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
5. si:dkey-169l5.3 si:dkey-169l5.3 239 2.6 - 0.818 - - - 0.870 0.912 - -
6. gfra1b ENSDARG00000102564 821 2.591 0.867 - - - - 0.804 0.920 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
7. SLC5A7 SLC5A7 453 2.552 0.754 - - - - 0.859 0.939 - -
8. nkx6.2 ENSDARG00000104735 5081 2.537 0.799 - - - - 0.793 0.945 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
9. im:7162084 im:7162084 665 2.514 0.757 - - - - 0.821 0.936 - -
10. chga ENSDARG00000008829 1086 2.505 0.793 - - - - 0.766 0.946 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
11. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 2.502 0.865 - - - - 0.768 0.869 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
12. chat chat 463 2.501 0.850 - - - - 0.733 0.918 - -
13. CABZ01029738.1 CABZ01029738.1 327 2.46 0.710 - - - - 0.858 0.892 - -
14. calca ENSDARG00000056590 150 2.46 0.796 0.732 - - - - 0.932 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
15. CASS4 ENSDARG00000006775 760 2.459 0.740 0.881 - - - - 0.838 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
16. si:ch73-265d7.2 ENSDARG00000116713 2142 2.456 0.837 - - - - 0.799 0.820 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
17. clstn1 ENSDARG00000031720 5286 2.446 0.764 - - - - 0.726 0.956 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
18. BX511121.1 ENSDARG00000029997 1774 2.443 0.737 - - - - 0.820 0.886 - -
19. ADAMTS3 ENSDARG00000060127 2839 2.438 0.808 - - - - 0.756 0.874 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
20. ENTHD1 ENTHD1 235 2.43 0.794 - - - - 0.745 0.891 - -
21. nkx6.1 ENSDARG00000022569 3779 2.406 0.761 - - - - 0.788 0.857 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
22. ek1 ENSDARG00000020080 742 2.404 0.737 0.861 - - - - 0.806 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
23. si:ch211-247j9.1 ENSDARG00000079283 217 2.401 0.784 0.740 - - - - 0.877 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
24. slc18a3a ENSDARG00000006356 1285 2.376 0.707 0.735 - - - - 0.934 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
25. GADD45G GADD45G 382 2.375 - - - - - 0.755 0.904 0.716 -
26. mnx2a ENSDARG00000042106 939 2.375 0.778 - - - - 0.758 0.839 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
27. ank2b ENSDARG00000043313 3065 2.367 0.717 - - - - 0.795 0.855 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
28. SYT2 ENSDARG00000014169 265 2.366 - 0.882 - - - 0.718 0.766 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
29. tmem229b ENSDARG00000060569 516 2.357 - - - - - 0.767 0.883 0.707 - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
30. zgc:100906 ENSDARG00000033599 344 2.356 - 0.897 - - - 0.715 0.744 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
31. nes ENSDARG00000088805 2710 2.349 0.718 - - - - 0.701 0.930 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
32. zgc:113531 ENSDARG00000038794 2063 2.321 0.809 - - - - 0.754 0.758 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
33. itga6a ENSDARG00000042282 1061 2.292 0.730 - - - - 0.752 0.810 - - integrin, alpha 6a [Source:ZFIN;Acc:ZDB-GENE-050309-23]
34. sst1.1 ENSDARG00000040799 677 2.29 0.747 - - - - 0.775 0.768 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
35. hoxd9a ENSDARG00000059274 3414 2.272 0.712 - - - - 0.758 0.802 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
36. hnrnpa3 ENSDARG00000059351 453 2.27 0.725 - - - - 0.779 0.766 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
37. hoxa5a ENSDARG00000102501 1667 2.214 0.703 - - - - 0.712 0.799 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
38. pde6a ENSDARG00000000380 40 1.859 - 0.926 - - - - - 0.933 - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
39. ZNF385C ENSDARG00000058154 478 1.829 - 0.904 - - - - 0.925 - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
40. ndel1a ENSDARG00000010953 292 1.805 - 0.920 - - - - 0.885 - - nudE neurodevelopment protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040115-2]
41. gpr22 gpr22 115 1.791 - - - - - - 0.903 0.888 -
42. vgf ENSDARG00000105529 247 1.782 - 0.856 - - - - 0.926 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
43. CU928222.1 ENSDARG00000097436 1662 1.774 0.862 - - - - - 0.912 - -
44. CABZ01080599.2 CABZ01080599.2 192 1.773 - - - - - 0.862 0.911 - -
45. CR848045.1 CR848045.1 459 1.771 - 0.828 - - - - 0.943 - -
46. SPOCK1 ENSDARG00000074644 794 1.766 - 0.851 - - - - 0.915 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
47. CDH12 CDH12 44 1.761 - 0.905 - - - - 0.856 - -
48. C8H9orf172 C8H9orf172 113 1.76 - 0.905 - - - - 0.855 - -
49. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.759 - - - - - - 0.819 0.940 - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
50. ric8a ENSDARG00000007247 229 1.752 - - - - - - 0.825 0.927 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
51. prrt1 ENSDARG00000062208 368 1.75 - 0.818 - - - - 0.932 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
52. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.746 0.804 - - - - - 0.942 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
53. rcv1 rcv1 77 1.746 - 0.818 - - - - - 0.928 -
54. her13 ENSDARG00000007097 2000 1.744 0.864 - - - - - 0.880 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
55. dync1i1 ENSDARG00000060948 554 1.738 - 0.846 - - - - 0.892 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
56. mpz ENSDARG00000038609 1740 1.737 - 0.818 - - - - 0.919 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
57. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.735 - - - - - 0.862 0.873 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
58. cdk5r2a ENSDARG00000071011 167 1.734 - - - - - 0.843 0.891 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
59. lrrn3 lrrn3 137 1.733 - 0.818 - - - - 0.915 - -
60. celf4 ENSDARG00000070045 1537 1.732 - 0.785 - - - - 0.947 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
61. EML5 ENSDARG00000053517 74 1.731 - 0.851 - - - - 0.880 - - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
62. nrarpb ENSDARG00000018958 6225 1.73 0.783 - - - - - 0.947 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
63. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.729 0.801 - - - - - 0.928 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
64. GRIN3A ENSDARG00000075802 27 1.721 - 0.818 - - - - 0.903 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
65. pdzrn4 ENSDARG00000045687 362 1.718 0.814 - - - - - 0.904 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
66. SSX2IP SSX2IP 316 1.714 - - - - - 0.853 0.861 - -
67. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.712 - - - - - 0.787 0.925 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
68. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.711 0.795 - - - - - 0.916 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
69. FRRS1L ENSDARG00000103940 224 1.708 0.821 - - - - 0.887 - - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
70. lhfpl4a ENSDARG00000111810 206 1.704 - - - - - 0.859 0.845 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
71. nkx2.2a ENSDARG00000053298 747 1.697 - 0.930 - - - 0.767 - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
72. CT030046.1 CT030046.1 190 1.697 - - - - - - 0.853 0.844 -
73. neurog1 ENSDARG00000056130 3924 1.696 - - - - - 0.759 0.937 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
74. gprc5bb ENSDARG00000075141 119 1.685 - - - - - - 0.772 0.913 - G protein-coupled receptor, class C, group 5, member Bb [Source:ZFIN;Acc:ZDB-GENE-090313-75]
75. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.683 - 0.940 - - - 0.743 - - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
76. SNAP91 ENSDARG00000098809 556 1.68 0.748 - - - - - 0.932 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
77. elavl3 ENSDARG00000014420 8644 1.679 - - - - - 0.750 0.929 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
78. tac1 ENSDARG00000014490 781 1.677 0.847 - - - - 0.830 - - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
79. map7d2a ENSDARG00000068480 513 1.676 - - - - - 0.720 0.956 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
80. atp1b2a ENSDARG00000099203 4010 1.674 - 0.740 - - - - 0.934 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
81. mnx2b ENSDARG00000030350 484 1.673 - - - - - 0.847 0.826 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
82. cers6 ENSDARG00000053583 247 1.672 - - - - - - 0.943 0.729 - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
83. ROBO3_1 ROBO3_1 468 1.671 0.777 - - - - - 0.894 - -
84. snap25b ENSDARG00000058117 469 1.669 - - - - - - 0.853 0.816 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
85. sall3b ENSDARG00000057586 982 1.669 0.726 - - - - - 0.943 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
86. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.667 - - - - - 0.842 0.825 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
87. PRIMA1 PRIMA1 459 1.666 0.806 - - - - - 0.860 - -
88. rabl6 rabl6 489 1.666 - - - - - 0.765 - 0.901 -
89. PPP2R5B ENSDARG00000054931 213 1.665 - 0.818 - - - - 0.847 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
90. her4.3 ENSDARG00000070770 613 1.665 - - - - - 0.743 0.922 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
91. ache ENSDARG00000031796 1985 1.664 - - - - - 0.883 0.781 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
92. hmp19 2554 1.661 0.727 - - - - - 0.934 - - HMP19 protein
93. glra1 ENSDARG00000012019 315 1.661 - - - - 0.753 - 0.908 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
94. APBB3 ENSDARG00000053771 654 1.661 - - - - - 0.737 0.924 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
95. cbln1 ENSDARG00000057296 165 1.66 - 0.777 - - - - 0.883 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
96. tmem35 ENSDARG00000052567 5685 1.659 - - - - - 0.700 0.959 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
97. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.658 - - - - - - 0.813 0.845 - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
98. fyna ENSDARG00000011370 1679 1.658 0.796 - - - - - 0.862 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
99. sv2bb ENSDARG00000060711 196 1.657 - - - - - 0.723 0.934 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
100. chrna2a ENSDARG00000006602 163 1.654 - - - - - 0.806 0.848 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]

There are 2228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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