Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sema3ab

Gene Name Gene ID Reads Annotation
sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]










Genes with expression patterns similar to sema3ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
2. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 2.355 - - 0.721 - - 0.734 - 0.900 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
3. phldb1a ENSDARG00000061093 1637 1.895 - 0.996 0.899 - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
4. crabp1b ENSDARG00000035904 2753 1.819 - 0.995 0.824 - - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
5. suv39h1b ENSDARG00000055753 1540 1.819 - 0.996 0.823 - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
6. ndrg2 ENSDARG00000011170 11442 1.816 - 0.985 - - - - - 0.831 - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
7. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.778 - 0.989 - - - 0.789 - - - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
8. psmb2 ENSDARG00000031511 4016 1.757 - - - - - - - 0.856 0.901 proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
9. mat2b ENSDARG00000012932 3146 1.747 - 0.986 0.761 - - - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
10. BX649554.3_1 BX649554.3_1 1071 1.745 - - 0.838 - - - - 0.907 -
11. fstl1a ENSDARG00000015559 1687 1.742 - - 0.851 - - - - - 0.891 follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
12. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.741 - - 0.824 - - - - 0.917 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
13. CCDC167 ENSDARG00000045850 1024 1.734 - - 0.839 - - - - 0.895 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
14. ahsa1l ahsa1l 2366 1.707 - 0.997 0.710 - - - - - -
15. vps72 1164 1.696 - - 0.809 - - - - - 0.887 vacuolar protein sorting 72 homolog (S. cerevisiae)
16. mibp2 ENSDARG00000101844 17444 1.692 - 0.960 - - - - - 0.732 - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
17. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.674 - - 0.916 - - - - 0.758 - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
18. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.669 - - 0.853 - - - - 0.816 - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
19. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 1.655 - 0.928 - - - - - - 0.727 SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
20. BX571794.1 ENSDARG00000097619 376 1.647 0.824 - 0.823 - - - - - -
21. AIFM2 ENSDARG00000077549 1419 1.63 - - - - - 0.727 - 0.903 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
22. st6gal2 st6gal2 1570 1.625 - - - - - 0.732 - 0.893 -
23. KIF26A KIF26A 1077 1.61 - - 0.899 - - 0.711 - - -
24. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.608 0.734 - - - - - - 0.874 - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
25. stox2a ENSDARG00000070162 1620 1.604 - - - - - 0.716 - 0.888 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
26. frem2a ENSDARG00000076856 11022 1.596 - - 0.883 - 0.713 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
27. CASK CASK 1750 1.586 - - 0.778 - - 0.808 - - -
28. psmb3 ENSDARG00000013938 10744 1.554 - 0.840 - - - 0.714 - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
29. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.553 - - 0.760 - - - - 0.793 -
30. pkd2 ENSDARG00000014098 2384 1.545 - - 0.839 - - - 0.706 - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
31. CU915738.1 CU915738.1 3723 1.543 - 0.720 - - - - - 0.823 -
32. rapgef1a ENSDARG00000043593 416 1.537 - - 0.833 - - 0.704 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
33. tfap2c ENSDARG00000040606 4628 1.532 - - 0.711 - - - - 0.821 - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
34. FAM110D FAM110D 3632 1.506 - - 0.750 - 0.756 - - - -
35. copz2 ENSDARG00000006786, ENSDARG00000112084 4375 1.484 - - 0.758 - - - - 0.726 - coatomer protein complex, subunit zeta 2 [Source:ZFIN;Acc:ZDB-GENE-000406-5]
36. SENP2 ENSDARG00000073837 1411 1.476 - - - - - 0.737 0.739 - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
37. APOD APOD 3404 1.476 - - 0.772 - - - - 0.704 -
38. RILP ENSDARG00000074660 249 1.463 0.763 - - - - 0.700 - - - Rab interacting lysosomal protein [Source:ZFIN;Acc:ZDB-GENE-100408-4]
39. and3 ENSDARG00000056873 22650 1.456 - - 0.719 - - - - 0.737 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
40. cbwd ENSDARG00000004318, ENSDARG00000111371 626 1.452 0.719 - - - - - 0.733 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
41. schip1 ENSDARG00000035175 3838 1.449 - - - - - 0.719 0.730 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
42. nxf1 ENSDARG00000055076 3251 1.439 - - - - - 0.701 0.738 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
43. fermt2 ENSDARG00000020242 9351 1.433 - - 0.709 - - - 0.724 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
44. lpl ENSDARG00000087697 2578 1.431 - - - - - 0.710 0.721 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
45. tes ENSDARG00000051857 2020 0.999 - 0.999 - - - - - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
46. SYTL1 ENSDARG00000070094 282 0.998 - 0.998 - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
47. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 0.998 - 0.998 - - - - - - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
48. WDR81 ENSDARG00000079702 822 0.998 - 0.998 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
49. fhdc1 ENSDARG00000074812 934 0.998 - 0.998 - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
50. wu:fi42e03 ENSDARG00000070709 276 0.998 - 0.998 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
51. STARD4 ENSDARG00000102477 411 0.998 - 0.998 - - - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
52. prosc 925 0.998 - 0.998 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
53. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.998 - 0.998 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
54. trnau1apa ENSDARG00000101323 911 0.998 - 0.998 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
55. thbs4a ENSDARG00000102777 625 0.998 - 0.998 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
56. cnksr2b ENSDARG00000073707 664 0.998 - 0.998 - - - - - - - connector enhancer of kinase suppressor of Ras 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8048]
57. CAPN1_1 ENSDARG00000055338 288 0.998 - 0.998 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
58. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.998 - 0.998 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
59. shda ENSDARG00000094243 929 0.998 - 0.998 - - - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
60. ponzr5 ENSDARG00000055046, ENSDARG00000115684 1093 0.998 - 0.998 - - - - - - - plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]
61. xylt1 ENSDARG00000061248 2357 0.997 - 0.997 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
62. galns ENSDARG00000051853, ENSDARG00000113387 347 0.997 - 0.997 - - - - - - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
63. gpd1c ENSDARG00000036942 869 0.997 - 0.997 - - - - - - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
64. aldh3a2b ENSDARG00000029381 2187 0.997 - 0.997 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
65. ctage5 530 0.997 - 0.997 - - - - - - - CTAGE family, member 5, transcript variant X8
66. gfap ENSDARG00000025301 5584 0.997 - 0.997 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
67. angptl3 ENSDARG00000044365 574 0.997 - 0.997 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
68. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.997 - 0.997 - - - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
69. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.997 - 0.997 - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
70. ccnc ENSDARG00000009607 1240 0.997 - 0.997 - - - - - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
71. nkain1 ENSDARG00000006859 1961 0.997 - 0.997 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
72. sema4ba ENSDARG00000074414 1194 0.997 - 0.997 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
73. eya2 ENSDARG00000018984 1768 0.997 - 0.997 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
74. MTMR11 ENSDARG00000069755 917 0.997 - 0.997 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
75. CABZ01079490.1 CABZ01079490.1 1808 0.997 - 0.997 - - - - - - -
76. dyrk1ab ENSDARG00000023814 1769 0.997 - 0.997 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
77. ddx42 ENSDARG00000037928 1659 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
78. ppfibp2b ENSDARG00000029168 961 0.997 - 0.997 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
79. esrrga ENSDARG00000004861 805 0.997 - 0.997 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
80. bmpr1bb ENSDARG00000102742 1036 0.996 - 0.996 - - - - - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
81. zgc:111974 zgc:111974 1386 0.996 - 0.996 - - - - - - -
82. acsbg1 ENSDARG00000062077 2020 0.996 - 0.996 - - - - - - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
83. wu:fb54a03 wu:fb54a03 1722 0.996 - 0.996 - - - - - - -
84. snx27b ENSDARG00000016977 2768 0.996 - 0.996 - - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
85. cks1b ENSDARG00000007971 2739 0.996 - 0.996 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
86. kpna5 ENSDARG00000042030 1643 0.996 - 0.996 - - - - - - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
87. ccsapb ENSDARG00000040085 784 0.996 - 0.996 - - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
88. rbm14b ENSDARG00000103834 1597 0.996 - 0.996 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
89. nubp1 ENSDARG00000055472 1182 0.996 - 0.996 - - - - - - - nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]
90. mrpl14 ENSDARG00000068886 1991 0.996 - 0.996 - - - - - - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
91. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.995 - 0.995 - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
92. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 0.995 - 0.995 - - - - - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
93. prss12 ENSDARG00000061830 593 0.995 - 0.995 - - - - - - - serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
94. PPIC ENSDARG00000104343 662 0.995 - 0.995 - - - - - - - peptidylprolyl isomerase C [Source:ZFIN;Acc:ZDB-GENE-170217-1]
95. setbp1 ENSDARG00000093799 4499 0.995 - 0.995 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
96. samm50l ENSDARG00000039681 2465 0.995 - 0.995 - - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
97. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.995 - 0.995 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
98. ube2f ENSDARG00000025754 1946 0.995 - 0.995 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
99. rapgef2 ENSDARG00000005482 2586 0.994 - 0.994 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
100. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.994 - 0.994 - - - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]

There are 963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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