Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sec31b

Gene Name Gene ID Reads Annotation
sec31b ENSDARG00000002916 1792 SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]










Genes with expression patterns similar to sec31b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sec31b ENSDARG00000002916 1792 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]
2. CT573389.2 CT573389.2 1183 1.817 - - - - - - 0.894 - 0.923
3. id3 ENSDARG00000054823 3484 1.733 - - - - - - - 0.826 0.907 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
4. gna13b ENSDARG00000037924 1963 1.728 - - - - - - 0.796 - 0.932 guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
5. mpv17 ENSDARG00000032431 1225 1.725 - - - - - - 0.791 - 0.934 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
6. RNF5 ENSDARG00000075606 1730 1.722 - - - - - - - 0.771 0.951 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
7. prc1a ENSDARG00000100918 1746 1.72 - - - - - - - 0.770 0.950 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
8. dlg5a ENSDARG00000074059 1834 1.705 - - - - - - - 0.763 0.942 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
9. marveld1 ENSDARG00000011724 1025 1.676 - - - - - - 0.740 - 0.936 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
10. gna15.1 ENSDARG00000016364 754 1.662 - - - - - - 0.752 - 0.910 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
11. WDFY3 ENSDARG00000078890 2092 1.645 - - - - - - 0.733 - 0.912 WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
12. vps28 ENSDARG00000103203 4991 1.627 - - - - - - 0.701 - 0.926 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
13. sppl2 ENSDARG00000030448 1040 1.626 - - - - - - - 0.703 0.923 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
14. cxcr4a ENSDARG00000057633 1829 1.606 - - - - - - - 0.718 0.888 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
15. sec61b ENSDARG00000076568 11859 1.589 - - - - - - 0.797 - 0.792 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
16. schip1 ENSDARG00000035175 3838 1.583 - - - - - 0.720 - - 0.863 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
17. xylt1 ENSDARG00000061248 2357 1.55 - - - - - - - 0.753 0.797 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
18. elavl1 11672 1.544 - - - - - - - 0.839 0.705 ELAV like RNA binding protein 1, transcript variant X3
19. blvrb ENSDARG00000096829 3296 1.54 - - - - - - 0.717 - 0.823 biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
20. limk2 ENSDARG00000005104 2598 1.526 - - - - - - 0.754 0.772 - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
21. slc25a1b ENSDARG00000076381 6213 1.51 - - - - - - 0.711 - 0.799 slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
22. cbll1 ENSDARG00000015222 995 1.505 - - - - - - 0.720 0.785 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
23. rab18b ENSDARG00000098344 1154 1.5 - - - - - 0.774 0.726 - - RAB18B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040801-185]
24. SIPA1 SIPA1 302 1.494 - - - - - 0.704 - 0.790 -
25. gramd1a ENSDARG00000076689 1148 1.486 - - - - - 0.733 0.753 - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
26. si:ch211-241n15.2 si:ch211-241n15.2 435 1.485 - - - 0.701 - - - 0.784 -
27. UBL4A UBL4A 1115 1.46 - - - - - - 0.733 0.727 -
28. lace1a lace1a 561 1.451 - - - - - 0.732 0.719 - -
29. srsf9 ENSDARG00000008097 2405 1.447 - - - - - - 0.702 0.745 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
30. sumo3b ENSDARG00000035993 3414 1.414 - - - - - 0.712 - 0.702 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
31. dek ENSDARG00000070108 2262 0.973 - - - - - - - 0.973 - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
32. CCDC134 CCDC134 477 0.967 - - - - - - - 0.967 -
33. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 0.965 - - - - - - - 0.965 - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
34. palm1b ENSDARG00000007818 2128 0.96 - - - - - - - 0.960 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
35. sin3ab ENSDARG00000059812 2140 0.956 - - - - - - - - 0.956 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
36. fam65b 557 0.955 - - - - - - - - 0.955 family with sequence similarity 65, member B, transcript variant X4
37. cep170a cep170a 652 0.955 - - - - - - - - 0.955
38. ing2 ENSDARG00000104907 1336 0.953 - - - - - - - - 0.953 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
39. yy1b ENSDARG00000027978 2669 0.951 - - - - - - - - 0.951 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
40. lap3 ENSDARG00000061981 1188 0.95 - - - - - - - - 0.950 leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
41. daam1a ENSDARG00000015059 1460 0.949 - - - - - - - - 0.949 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
42. ZDHHC3 ZDHHC3 1208 0.949 - - - - - - - - 0.949
43. snrpa1 ENSDARG00000024651 3306 0.947 - - - - - - - - 0.947 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
44. extl3 ENSDARG00000026811 4815 0.947 - - - - - - - - 0.947 exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
45. prkra ENSDARG00000076718 606 0.945 - - - - - - - - 0.945 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
46. zgc:194839 ENSDARG00000078550 4003 0.945 - - - - - - - - 0.945 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
47. MALSU1 MALSU1 1251 0.945 - - - - - - - - 0.945
48. coil ENSDARG00000040070 863 0.945 - - - - - - - - 0.945 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
49. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.944 - - - - - - - - 0.944 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
50. lamc3 ENSDARG00000093572 562 0.944 - - - - - - - - 0.944 laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
51. sar1b ENSDARG00000103403 1699 0.944 - - - - - - - - 0.944 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
52. U6 U6 931 0.944 - - - - - - - - 0.944
53. ptpn2a ENSDARG00000016481 493 0.944 - - - - - - - - 0.944 protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
54. PACS1_1 PACS1_1 1264 0.943 - - - - - - - - 0.943
55. ppp5c ENSDARG00000034313 8794 0.943 - - - - - - - - 0.943 protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
56. rbpja ENSDARG00000003398 1309 0.943 - - - - - - - - 0.943 recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
57. cstf1 ENSDARG00000044820 1663 0.942 - - - - - - - - 0.942 cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
58. ppp6r2b ENSDARG00000069654 323 0.942 - - - - - - - - 0.942 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
59. PGBD4_3 PGBD4_3 861 0.942 - - - - - - - - 0.942
60. CARD11 ENSDARG00000052741 249 0.942 - - - - - - - - 0.942 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
61. CACUL1 ENSDARG00000021885 691 0.942 - - - - - - - - 0.942 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
62. twistnb ENSDARG00000024416 1077 0.941 - - - - - - - - 0.941 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
63. si:ch211-135f11.1 166 0.941 - - - - - - - - 0.941 si:ch211-135f11.1, transcript variant X3
64. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.941 - - - - - - - - 0.941 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
65. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.941 - - - - - - - - 0.941
66. csrnp2 ENSDARG00000075972 1650 0.941 - - - - - - - 0.941 - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
67. C25H11orf24 C25H11orf24 1011 0.94 - - - - - - - - 0.940
68. mir205 2147 0.94 - - - - - - - - 0.940 microRNA 205
69. NSMCE2 ENSDARG00000076379 2133 0.94 - - - - - - - - 0.940 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
70. slc12a9 ENSDARG00000060366 293 0.94 - - - - - - - - 0.940 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
71. panx1a ENSDARG00000025285 352 0.94 - - - - - - - - 0.940 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
72. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.94 - - - - - - - - 0.940 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
73. INO80B ENSDARG00000062749 844 0.939 - - - - - - 0.939 - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
74. fgf8a ENSDARG00000003399 580 0.939 - - - - - - - - 0.939 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
75. PEG3_5 PEG3_5 1624 0.939 - - - - - - - - 0.939
76. MON1B_1 MON1B_1 697 0.939 - - - - - - - - 0.939
77. atp2a3 ENSDARG00000060978 1408 0.939 - - - - - - - - 0.939 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
78. msxa msxa 263 0.939 - - - - - - - - 0.939
79. MPRIP_1 ENSDARG00000105209 898 0.938 - - - - - - - - 0.938 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
80. fam20c fam20c 603 0.938 - - - - - - - - 0.938
81. C19H18orf21 C19H18orf21 338 0.938 - - - - - - - - 0.938
82. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.938 - - - - - - - - 0.938 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
83. nudt3b ENSDARG00000042123 311 0.938 - - - - - - - - 0.938 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
84. TSC22D1 ENSDARG00000038306 517 0.938 - - - - - - - - 0.938 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
85. ZNF337_22 ZNF337_22 322 0.938 - - - - - - - - 0.938
86. pex7 ENSDARG00000042553 409 0.938 - - - - - - - - 0.938 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
87. def6b ENSDARG00000044524 99 0.937 - - - - - - - - 0.937 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
88. nol7 ENSDARG00000075795 1559 0.937 - - - - - - - - 0.937 nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
89. ints10 ENSDARG00000043031 455 0.937 - - - - - - - - 0.937 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
90. zgc:158254 ENSDARG00000071233 265 0.937 - - - - - - - - 0.937 zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
91. mylkb ENSDARG00000004753 95 0.937 - - - - - - - - 0.937 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
92. TLN2 TLN2 359 0.937 - - - - - - - - 0.937
93. TMC6 TMC6 773 0.937 - - - - - - - - 0.937
94. E2F6 E2F6 1271 0.936 - - - - - - - - 0.936
95. PVRL4 1691 0.936 - - - - - - - - 0.936 poliovirus receptor-related 4
96. zgc:113333 ENSDARG00000038242 797 0.936 - - - - - - - - 0.936 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
97. asap2b ENSDARG00000019564 1660 0.936 - - - - - - - - 0.936 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
98. slc6a19b ENSDARG00000056719 140 0.936 - - - - - - - - 0.936 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
99. tacc1 ENSDARG00000073753 1127 0.936 - - - - - - - - 0.936 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
100. sox8 sox8 109 0.936 - - - - - - - - 0.936

There are 770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA