Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sec23a

Gene Name Gene ID Reads Annotation
sec23a ENSDARG00000104230 3910 Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]










Genes with expression patterns similar to sec23a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sec23a ENSDARG00000104230 3910 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
2. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 2.666 - 0.861 0.948 - - - - - 0.857 dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
3. mrps21 ENSDARG00000070985 3943 2.532 - - 0.960 - - 0.799 0.773 - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
4. si:dkey-193c22.2 ENSDARG00000076735 2791 1.775 - 0.803 0.972 - - - - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
5. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.714 - - 0.971 - - - - - 0.743 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
6. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.709 - - 0.973 - - - - - 0.736 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
7. itgb1b.1 ENSDARG00000053232 4721 1.708 - 0.735 0.973 - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
8. hspa4a ENSDARG00000004754 3439 1.69 - - 0.959 - - - - - 0.731 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
9. nol12 ENSDARG00000038027 2288 1.681 - - 0.972 - - 0.709 - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
10. vps29 ENSDARG00000069521 5599 1.66 - - 0.849 - - 0.811 - - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
11. wdr45 ENSDARG00000090219 829 1.66 - 0.706 0.954 - - - - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
12. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.624 - - 0.868 - - 0.756 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
13. bzw1b ENSDARG00000099148 2972 1.621 - 0.857 - - - - 0.764 - - basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
14. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.583 - - 0.869 - - - 0.714 - - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
15. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.579 - - 0.868 - - - - - 0.711 zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
16. hspb1 ENSDARG00000041065 13534 1.572 - - - - - 0.793 0.779 - - heat shock protein, alpha-crystallin-related, 1 [Source:ZFIN;Acc:ZDB-GENE-030326-4]
17. eif3s10 ENSDARG00000076815 10822 1.565 - - 0.842 - - 0.723 - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
18. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.55 - - - - - 0.741 0.809 - - ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
19. GPR108 ENSDARG00000096651 1734 1.539 - 0.726 - - - - 0.813 - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
20. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 1.536 - 0.770 - - - - - - 0.766 stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
21. si:dkey-29j8.3 1288 1.534 - 0.737 - - - - 0.797 - - si:dkey-29j8.3, transcript variant X2
22. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 1.533 - - - - - - 0.812 - 0.721 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
23. psmd12 ENSDARG00000052377 7763 1.514 - - - - - - 0.740 - 0.774 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
24. ist1 ENSDARG00000051888 4536 1.513 - 0.748 - - - - - - 0.765 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
25. bida ENSDARG00000069290, ENSDARG00000112031 825 1.508 - 0.746 - - - - - - 0.762 BH3 interacting domain death agonist [Source:ZFIN;Acc:ZDB-GENE-050419-35]
26. rap2b ENSDARG00000103032 2080 1.505 - 0.758 - - - - - - 0.747 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
27. colgalt1 ENSDARG00000073974 1473 1.5 - - - - - 0.781 0.719 - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
28. nek7 ENSDARG00000056966 816 1.5 0.740 - - - - - 0.760 - - NIMA-related kinase 7 [Source:ZFIN;Acc:ZDB-GENE-040801-136]
29. mgst3 mgst3 3982 1.498 - - - - - 0.747 0.751 - -
30. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.496 - - - - - - 0.727 - 0.769 si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
31. creb3l2 ENSDARG00000063563 1284 1.494 - - - - - - 0.712 - 0.782 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
32. ufm1 ENSDARG00000043857 4152 1.493 - 0.755 - - - - - - 0.738 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
33. alg2 ENSDARG00000070399 772 1.475 - 0.717 - - - - - - 0.758 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
34. aco1 ENSDARG00000026376 5034 1.474 - 0.772 - - - - 0.702 - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
35. arfgap2 ENSDARG00000067601 6801 1.467 - 0.715 - - - - 0.752 - - ADP-ribosylation factor GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-051120-177]
36. BX682552.2 BX682552.2 1427 1.463 - 0.737 - - - - - - 0.726
37. nus1 ENSDARG00000027813 1417 1.463 - 0.721 - - - - 0.742 - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
38. cnpy1 ENSDARG00000003757 1132 1.443 - - - - - 0.716 - - 0.727 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
39. eea1 ENSDARG00000062868 1126 1.441 - - - - - 0.703 - - 0.738 early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
40. CABZ01013938.1 CABZ01013938.1 4497 1.441 - - - - - 0.727 0.714 - -
41. mdka ENSDARG00000036036 23084 1.435 - 0.729 0.706 - - - - - - midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
42. gorasp1 gorasp1 3075 1.432 - 0.730 - - - - 0.702 - -
43. fam65a 731 1.422 - 0.708 - - - - 0.714 - - family with sequence similarity 65, member A, transcript variant X5
44. tfap2a ENSDARG00000059279 3741 0.979 - - 0.979 - - - - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
45. mtx2 ENSDARG00000029415 2205 0.977 - - 0.977 - - - - - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
46. fryl ENSDARG00000040001 3256 0.977 - - 0.977 - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
47. C11H12orf10 C11H12orf10 1305 0.977 - - 0.977 - - - - - -
48. ppp1r14bb ENSDARG00000030161 2349 0.977 - - 0.977 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
49. mrps18b ENSDARG00000007065 2121 0.976 - - 0.976 - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
50. hadhaa ENSDARG00000057128 2179 0.976 - - 0.976 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
51. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 0.975 - - 0.975 - - - - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
52. lsm14aa ENSDARG00000006600 2298 0.975 - - 0.975 - - - - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
53. mrpl15 ENSDARG00000101306 2796 0.975 - - 0.975 - - - - - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
54. NDUFB2 ENSDARG00000045490 9141 0.975 - - 0.975 - - - - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
55. hdac10 ENSDARG00000086458 676 0.975 - - 0.975 - - - - - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
56. wdr16 wdr16 532 0.974 - - 0.974 - - - - - -
57. arcn1b ENSDARG00000031214 4529 0.973 - - 0.973 - - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
58. gmpr2 ENSDARG00000061301 1132 0.973 - - 0.973 - - - - - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
59. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.973 - - 0.973 - - - - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
60. elp6 ENSDARG00000060445, ENSDARG00000115612 458 0.973 - - 0.973 - - - - - - elongator acetyltransferase complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-060825-249]
61. SIK1 ENSDARG00000058606 1982 0.973 - - 0.973 - - - - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
62. ZBTB41 ENSDARG00000054984 464 0.973 - - 0.973 - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
63. itga3b ENSDARG00000012824 1872 0.973 - - 0.973 - - - - - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
64. aplnra ENSDARG00000002172 955 0.973 - - 0.973 - - - - - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
65. cacnb2a ENSDARG00000099045 374 0.973 - - 0.973 - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
66. ect2 ENSDARG00000007278 1193 0.973 - - 0.973 - - - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
67. itgb1bp1 ENSDARG00000007169 2723 0.973 - - 0.973 - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
68. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 0.973 - - 0.973 - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
69. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.973 - - 0.973 - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
70. si:dkey-240e12.6 ENSDARG00000110137 674 0.973 - - 0.973 - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
71. neu1 ENSDARG00000008832 2848 0.973 - - 0.973 - - - - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
72. TRIM35_10 TRIM35_10 484 0.973 - - 0.973 - - - - - -
73. asna1 ENSDARG00000018190 5253 0.973 - - 0.973 - - - - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
74. mrps18a ENSDARG00000024465 5187 0.973 - - 0.973 - - - - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
75. mknk1 ENSDARG00000018411 749 0.972 - - 0.972 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
76. TCEB3 2429 0.972 - - 0.972 - - - - - - transcription elongation factor B (SIII), polypeptide 3
77. gabarapl2 ENSDARG00000027200 5120 0.972 - - 0.972 - - - - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
78. MALSU1 MALSU1 1251 0.972 - - 0.972 - - - - - -
79. eppk1 ENSDARG00000096359 4315 0.972 - - 0.972 - - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
80. rnf14 ENSDARG00000043905 862 0.972 - - 0.972 - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
81. zgc:171759 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 340 0.972 - - 0.972 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
82. MYO1D ENSDARG00000036863 768 0.972 - - 0.972 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
83. laptm4a ENSDARG00000006397 1698 0.972 - - 0.972 - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
84. CR954963.1 ENSDARG00000097153 1135 0.972 - - 0.972 - - - - - -
85. slc1a6 ENSDARG00000010096 764 0.972 - - 0.972 - - - - - - solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
86. dna2 ENSDARG00000078759 846 0.972 - - 0.972 - - - - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
87. plxnc1 ENSDARG00000015278 501 0.972 - - 0.972 - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
88. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.971 - - 0.971 - - - - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
89. plxnb1b ENSDARG00000017211 4676 0.971 - - 0.971 - - - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
90. sdhb ENSDARG00000075768 5493 0.971 - - 0.971 - - - - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
91. sesn3 ENSDARG00000015822 5328 0.971 - - 0.971 - - - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
92. dhdds ENSDARG00000039851 1135 0.971 - - 0.971 - - - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
93. tlx2 ENSDARG00000011273 870 0.971 - - 0.971 - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
94. tmem47 ENSDARG00000057322 4691 0.97 - - 0.970 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
95. nanos1 ENSDARG00000109337 2494 0.97 - - 0.970 - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
96. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.97 - - 0.970 - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
97. six1b ENSDARG00000026473 1908 0.97 - - 0.970 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
98. cebpg ENSDARG00000036073 3791 0.97 - - 0.970 - - - - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
99. grpel2 ENSDARG00000069421 5673 0.97 - - 0.970 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
100. ACVR1B ACVR1B 4824 0.97 - - 0.970 - - - - - -

There are 740 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA