Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdr39u1

Gene Name Gene ID Reads Annotation
sdr39u1 ENSDARG00000099617 225 short chain dehydrogenase/reductase family 39U, member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-104]










Genes with expression patterns similar to sdr39u1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdr39u1 ENSDARG00000099617 225 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 short chain dehydrogenase/reductase family 39U, member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-104]
2. MSRA ENSDARG00000029587 30 1.767 - - - - - - 0.888 - 0.879 methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
3. cd151l ENSDARG00000068629 16 1.716 - - - - - - 0.831 - 0.885 CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
4. CABZ01074081.1 CABZ01074081.1 109 1.672 - - - - - 0.791 0.881 - -
5. st3gal4 ENSDARG00000041006 636 1.645 0.855 - - - - 0.790 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
6. si:dkey-3d4.1 si:dkey-3d4.1 37 1.586 - - - - - 0.760 0.826 - -
7. plk2a ENSDARG00000090752 392 1.582 - 0.797 - - - - - 0.785 - polo-like kinase 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060810-71]
8. ercc5 ENSDARG00000023678 468 1.58 - - - - - 0.759 0.821 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
9. CABZ01072607.1 ENSDARG00000113761 784 1.541 - - - - - 0.810 0.731 - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
10. elp2 ENSDARG00000017199 399 1.537 - - - - - 0.814 0.723 - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
11. C11H9orf89 C11H9orf89 477 1.51 - - - - - 0.740 - 0.770 -
12. nol12 ENSDARG00000038027 2288 1.503 - - - - - 0.734 0.769 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
13. qser1 ENSDARG00000074750 597 1.503 - - - - - 0.761 0.742 - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
14. cyp2k8 ENSDARG00000101190 69 1.498 - - - - - - 0.716 0.782 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
15. RNF115 ENSDARG00000062450 83 1.487 - - - - - - 0.703 0.784 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
16. grnb ENSDARG00000025081 716 1.486 - 0.726 - - - 0.760 - - - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
17. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.46 - - - - - 0.750 0.710 - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
18. scarb1 ENSDARG00000101557 503 1.452 - 0.710 - - - - - 0.742 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
19. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.958 - - - - - - 0.958 - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
20. zbtb34 ENSDARG00000013492 32 0.941 - - - - - - 0.941 - - zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
21. klf6b ENSDARG00000038561 27 0.937 - - - - - - 0.937 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
22. atp8b1 ENSDARG00000060980 181 0.921 - - - - - - - 0.921 - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
23. si:ch211-86h15.1 ENSDARG00000074098 354 0.917 - - - - - - 0.917 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
24. si:ch211-170d8.2 ENSDARG00000094887 247 0.907 - - - - - - - 0.907 - si:ch211-170d8.2 [Source:ZFIN;Acc:ZDB-GENE-030328-34]
25. si:dkey-72l17.6 ENSDARG00000102008 42 0.906 - - - - - - 0.906 - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
26. CU466279.1 CU466279.1 84 0.906 - - - - - - 0.906 - -
27. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 0.895 - - - - - 0.895 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
28. CABZ01073740.1 CABZ01073740.1 27 0.888 - - - - - - 0.888 - -
29. CABZ01034707.1 CABZ01034707.1 122 0.888 - - - - - - 0.888 - -
30. gdpd3b ENSDARG00000006944 19 0.888 - - - - - - 0.888 - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
31. ATXN1 ATXN1 12 0.888 - - - - - - 0.888 - -
32. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 0.888 - - - - - - 0.888 - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
33. si:dkey-153k10.6 10 0.888 - - - - - - 0.888 - - si:dkey-153k10.6, transcript variant X1
34. il34 ENSDARG00000091003 14 0.885 - - - - - - - - 0.885 interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
35. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 0.885 - - - - - - - - 0.885 si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
36. TAAR1_1 TAAR1_1 3 0.885 - - - - - - - - 0.885
37. abo ENSDARG00000019207 16 0.885 - - - - - - - - 0.885 ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-081104-23]
38. si:dkey-187i8.2 ENSDARG00000096624 8 0.885 - - - - - - - - 0.885 si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
39. dnaaf3 ENSDARG00000092662 20 0.885 - - - - - - - - 0.885 dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
40. si:dkey-157g16.6 ENSDARG00000057062 12 0.885 - - - - - - - - 0.885 si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
41. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.883 - - - - - - - 0.883 - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
42. sfi1 ENSDARG00000053992 1075 0.882 - - - - - - 0.882 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
43. C14H5orf45 C14H5orf45 83 0.882 - - - - - - 0.882 - -
44. slc52a2 ENSDARG00000102035 57 0.881 - - - - - - 0.881 - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
45. si:dkey-238o13.4 ENSDARG00000078847 884 0.881 - - - - - - 0.881 - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
46. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 0.881 - - - - - - 0.881 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
47. GPR78 GPR78 17 0.881 - - - - - - - - 0.881
48. srd5a3 ENSDARG00000043307 142 0.881 - - - - - - 0.881 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
49. ZNF512B ENSDARG00000071055 7 0.881 - - - - - - - - 0.881 zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
50. AL954698.1 ENSDARG00000098202 377 0.881 - - - - - - 0.881 - -
51. nmnat1 ENSDARG00000105748 102 0.88 - - - - - 0.880 - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
52. FYCO1 FYCO1 194 0.88 - - - - - - 0.880 - -
53. si:dkeyp-69c1.9 ENSDARG00000091888 39 0.879 - - - - - - - - 0.879 si:dkeyp-69c1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1774]
54. elac2 ENSDARG00000034060 252 0.878 - - - - - - 0.878 - - elaC ribonuclease Z 2 [Source:ZFIN;Acc:ZDB-GENE-041111-227]
55. slc15a1b ENSDARG00000044528 6 0.878 - - - - - - 0.878 - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
56. plek ENSDARG00000104325 21 0.877 - - - - - - - - 0.877 pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
57. rargb ENSDARG00000054003 7 0.877 - - - - - - - - 0.877 retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
58. smad9 368 0.876 - - - - - - 0.876 - - SMAD family member 9, transcript variant X1
59. pla2g7 ENSDARG00000003584 365 0.875 - - - - - 0.875 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
60. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.872 - - - - - - 0.872 - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
61. rapgef5b ENSDARG00000074307 112 0.872 - - - - - - 0.872 - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
62. cept1b ENSDARG00000021177 675 0.869 - - - - - - 0.869 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
63. CU672227.1 ENSDARG00000105807 15 0.868 - - - - - - - - 0.868
64. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 0.868 - - - - - - 0.868 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
65. glb1l ENSDARG00000029955 736 0.868 - 0.868 - - - - - - - galactosidase, beta 1-like [Source:ZFIN;Acc:ZDB-GENE-050309-196]
66. osbpl11 ENSDARG00000076328 195 0.865 - - - - - - - 0.865 - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
67. rab15 ENSDARG00000026484 326 0.861 - - - - - 0.861 - - - RAB15, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-2]
68. FP102801.1 FP102801.1 294 0.86 - - - - - - - 0.860 -
69. agxt2 ENSDARG00000100709 799 0.856 - - - - - - 0.856 - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
70. npm3 ENSDARG00000103594 302 0.856 - - - - - - 0.856 - - nucleophosmin/nucleoplasmin, 3 [Source:ZFIN;Acc:ZDB-GENE-050320-50]
71. ccdc169 ENSDARG00000089570 101 0.855 - - - - - - 0.855 - - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
72. maml3 ENSDARG00000079552 357 0.854 - - - - - - - 0.854 - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
73. GLDC ENSDARG00000035120 112 0.854 - - - - - - 0.854 - - glycine dehydrogenase (decarboxylating) [Source:ZFIN;Acc:ZDB-GENE-030131-340]
74. ca15b ENSDARG00000040510 5 0.854 - - - - - - 0.854 - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
75. si:dkey-211g8.5 ENSDARG00000092259 224 0.854 - - - - - 0.854 - - - si:dkey-211g8.5 [Source:ZFIN;Acc:ZDB-GENE-060503-718]
76. LPHN1 LPHN1 152 0.852 - - - - - 0.852 - - -
77. hhipl1 ENSDARG00000062501 210 0.851 - - - - - - 0.851 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
78. dio1 ENSDARG00000042112 87 0.851 - - - - - - 0.851 - - iodothyronine deiodinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-41]
79. cep44 ENSDARG00000053106 683 0.851 - - - - - - 0.851 - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
80. si:ch211-253p2.2 ENSDARG00000071772 64 0.85 - - - - - - 0.850 - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
81. FUK ENSDARG00000032650 20 0.849 - - - - - - - - 0.849 fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
82. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.845 - - - - - - - - 0.845 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
83. tmprss15 ENSDARG00000079393 25 0.844 - - - - - - 0.844 - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
84. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 0.844 - - - - - - 0.844 - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
85. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 0.843 - - - - - - 0.843 - - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
86. B3GNT2_1 B3GNT2_1 380 0.843 - - - - - 0.843 - - -
87. si:ch211-114l13.10 25 0.842 - - - - - 0.842 - - - si:ch211-114l13.10
88. si:ch211-284e13.5 ENSDARG00000094725 68 0.842 - - - - - - 0.842 - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
89. inhbaa ENSDARG00000012671 207 0.842 - - - - - 0.842 - - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
90. FAM117A_1 FAM117A_1 360 0.842 - - - - - - 0.842 - -
91. PPP1R16B ENSDARG00000079860 390 0.84 - - - - - - 0.840 - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
92. tsen54 ENSDARG00000036844 11 0.84 - - - - - - - - 0.840 TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
93. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.84 - - - - - - 0.840 - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
94. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.84 - - - - - - - 0.840 - F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
95. CABZ01023255.1 ENSDARG00000099984 13 0.839 - - - - - - - - 0.839 NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
96. tcf19l ENSDARG00000040036 369 0.839 - - - - - - 0.839 - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
97. ctrl ENSDARG00000068680 18 0.837 - - - - - - - - 0.837 chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
98. CABZ01067609.1 CABZ01067609.1 111 0.836 - - - - - 0.836 - - -
99. opa1_1 ENSDARG00000070801 1424 0.835 - 0.835 - - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
100. tbl3 ENSDARG00000052344 1530 0.835 - - - - - - 0.835 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]

There are 788 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA