Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdr16c5b

Gene Name Gene ID Reads Annotation
sdr16c5b ENSDARG00000017794 970 short chain dehydrogenase/reductase family 16C, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2861]










Genes with expression patterns similar to sdr16c5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdr16c5b ENSDARG00000017794 970 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 short chain dehydrogenase/reductase family 16C, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2861]
2. zgc:66475 ENSDARG00000099519 1348 2.279 - 0.750 - - - - 0.829 0.700 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
3. pggt1b ENSDARG00000103464 441 1.67 - 0.804 - - - - 0.866 - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
4. mtfr2 ENSDARG00000060394 482 1.544 - - - - - - 0.831 0.713 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
5. tarbp2 ENSDARG00000070471 1946 1.534 - - - - - 0.749 - 0.785 - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
6. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.496 - 0.780 - - - - 0.716 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
7. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.475 - - - - - - 0.740 0.735 - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
8. gstm3 gstm3 1164 1.454 - - - - 0.731 - - 0.723 -
9. si:ch211-130m23.2 ENSDARG00000095136 121 1.43 - 0.725 - - - - 0.705 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
10. ABHD17A ABHD17A 453 1.429 - 0.720 - - - - - 0.709 -
11. NUDT12 ENSDARG00000100813 378 1.411 - - - - - - 0.702 0.709 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
12. DENND1A ENSDARG00000014592 436 1.403 - - - - - 0.700 - 0.703 - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
13. ZDHHC21 ENSDARG00000110709 295 0.924 - - - - - - 0.924 - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
14. dkc1 ENSDARG00000016484 7088 0.909 - - - - - - 0.909 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
15. xiap ENSDARG00000016143, ENSDARG00000110199 621 0.883 - - - - - - 0.883 - - X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]
16. prrx1a ENSDARG00000033971 1786 0.881 - - - - - - 0.881 - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
17. derl2 ENSDARG00000042401 863 0.88 - - - - - - 0.880 - - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
18. syt5a ENSDARG00000037941 81 0.869 - - - - - - - 0.869 - synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110]
19. znf451 ENSDARG00000076939 508 0.868 - 0.868 - - - - - - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
20. GANAB_1 GANAB_1 685 0.867 - - - - - - 0.867 - -
21. si:ch211-266d19.4 ENSDARG00000012642 1251 0.859 - 0.859 - - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
22. ck2b ck2b 781 0.847 - 0.847 - - - - - - -
23. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 0.844 - - - - - 0.844 - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
24. ptbp3 ENSDARG00000043757 6760 0.844 - - - - - - 0.844 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
25. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 0.842 - 0.842 - - - - - - - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
26. elovl4b ENSDARG00000027495 107 0.839 - - - - - - - 0.839 - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
27. si:dkey-22o22.2 ENSDARG00000102445 149 0.839 - - - - - - - 0.839 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
28. UNC119 UNC119 104 0.838 - - - - - - - 0.838 -
29. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 0.837 - - - - - - - 0.837 - opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
30. daxx ENSDARG00000000729 734 0.837 - - - - - - 0.837 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
31. BX548021.2_1 BX548021.2_1 164 0.836 - - - - - - - 0.836 -
32. tmem176l.3a ENSDARG00000098387 168 0.835 - - - - - - 0.835 - - transmembrane protein 176l.3a [Source:ZFIN;Acc:ZDB-GENE-080829-13]
33. zgc:163143 ENSDARG00000076437 166 0.835 - - - - - - - 0.835 - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
34. pex7 ENSDARG00000042553 409 0.834 - - - - - - 0.834 - - peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
35. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.833 - - - - - - 0.833 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
36. g2e3 ENSDARG00000001313 1485 0.832 - 0.832 - - - - - - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
37. b9d1 ENSDARG00000011727 580 0.83 - - - - - - 0.830 - - B9 protein domain 1 [Source:ZFIN;Acc:ZDB-GENE-050522-467]
38. MED17 ENSDARG00000006345 779 0.83 - - - - - - 0.830 - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
39. kalrnb ENSDARG00000063538, ENSDARG00000111077, ENSDARG00000111084 880 0.829 - - - - - - - 0.829 - kalirin RhoGEF kinase b [Source:ZFIN;Acc:ZDB-GENE-060421-7244]
40. sh3bgrl2 ENSDARG00000036878 282 0.829 - - - - - - - 0.829 - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
41. si:dkey-25o1.2 si:dkey-25o1.2 86 0.828 - - - - - - - 0.828 -
42. frmd8 ENSDARG00000073696 2661 0.825 - - - - - - 0.825 - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
43. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 0.825 - - - - - - 0.825 - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
44. CABZ01113191.1 CABZ01113191.1 388 0.825 - 0.825 - - - - - - -
45. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.822 - - - - - - - 0.822 - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
46. cers5 ENSDARG00000002365 2540 0.82 - - - - - - - 0.820 - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
47. trub2 ENSDARG00000028379 783 0.819 - - - - - - 0.819 - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
48. casp9 ENSDARG00000004325 306 0.819 - - - - - - 0.819 - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
49. rfx2 ENSDARG00000013575 1275 0.819 - - - - - - - 0.819 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
50. LGR4 ENSDARG00000060542 1222 0.818 - - - - - - - 0.818 - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
51. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 0.818 - - - - - - 0.818 - - exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
52. ephb4a ENSDARG00000100725 1749 0.816 - - - - - - - 0.816 - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
53. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 0.816 - - - - - - - 0.816 - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
54. sall4 ENSDARG00000044485 1694 0.813 - - - - - - 0.813 - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
55. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 0.812 - - - - - - 0.812 - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
56. CNNM2 CNNM2 225 0.812 - - - - - - 0.812 - -
57. LGALS3BP LGALS3BP 51 0.811 - - - - - - 0.811 - -
58. unc5b ENSDARG00000033327 3432 0.81 - - - - - - - 0.810 - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
59. clic1 ENSDARG00000103340 2235 0.81 - - - - - - 0.810 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
60. ostm1 ENSDARG00000069808 1024 0.809 - - - - - - 0.809 - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
61. METTL12 METTL12 415 0.809 - - - - - - 0.809 - -
62. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 0.808 - - - - - - 0.808 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
63. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.807 - - - - - - 0.807 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
64. pkib ENSDARG00000053110 527 0.806 - - - - - - - 0.806 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
65. nlrx1 ENSDARG00000073724 286 0.804 - 0.804 - - - - - - - NLR family member X1 [Source:ZFIN;Acc:ZDB-GENE-071119-3]
66. si:dkey-11c5.11 ENSDARG00000096637 130 0.804 - 0.804 - - - - - - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
67. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 0.804 - - - - - - 0.804 - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
68. psma6a ENSDARG00000019398 2702 0.804 - - - - - - - 0.804 - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
69. ppp1cbl ENSDARG00000102012 2301 0.804 - - - - - 0.804 - - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
70. apaf1 ENSDARG00000021239 1185 0.803 - 0.803 - - - - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
71. cecr1a 836 0.803 - - - - - - 0.803 - - cat eye syndrome chromosome region, candidate 1a
72. gltpd1 gltpd1 377 0.802 - - - - - - 0.802 - -
73. PRKD2 ENSDARG00000104676 1004 0.802 - - - - - - - 0.802 - protein kinase D2 [Source:ZFIN;Acc:ZDB-GENE-131120-142]
74. sar1b ENSDARG00000103403 1699 0.801 - - - - - - 0.801 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
75. mtx1a ENSDARG00000025500 275 0.8 - 0.800 - - - - - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
76. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 0.8 - - - - - - - 0.800 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
77. arhgap12a ENSDARG00000008548 757 0.8 - - - - - - 0.800 - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
78. PPP1R9B PPP1R9B 855 0.8 - - - - - - - 0.800 -
79. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.8 - - - - - - 0.800 - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
80. TRIO TRIO 1601 0.799 - 0.799 - - - - - - -
81. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.799 - - - - - - 0.799 - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
82. vps45 ENSDARG00000061180 791 0.798 - - - - - - - 0.798 - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
83. bag1 ENSDARG00000020895 1660 0.798 - - - - - - 0.798 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
84. cdc14b ENSDARG00000021483 4958 0.798 - - - - - 0.798 - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
85. tmem248 ENSDARG00000018825 1560 0.797 - 0.797 - - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
86. mboat2a ENSDARG00000031845 1255 0.797 - - - - - - 0.797 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
87. BX927351.1 ENSDARG00000096844 125 0.797 - - - - - - 0.797 - -
88. psmd11a ENSDARG00000060150 4529 0.796 - - - - - - 0.796 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
89. adipor1b ENSDARG00000042717 1348 0.795 - - - - - - - 0.795 - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
90. rad52 ENSDARG00000005274, ENSDARG00000116828 111 0.795 - - - - - - 0.795 - - RAD52 homolog, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-050731-10]
91. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 0.794 - - - - - - 0.794 - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
92. lipea ENSDARG00000063037 157 0.793 - 0.793 - - - - - - - lipase, hormone-sensitive a [Source:ZFIN;Acc:ZDB-GENE-060503-734]
93. sh3glb1 sh3glb1 1335 0.793 - - - - - - - 0.793 -
94. hddc3 ENSDARG00000020473 2814 0.792 - - - - - 0.792 - - - HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
95. ptplb ptplb 6135 0.791 - - - - - 0.791 - - -
96. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 0.791 - - - - - - 0.791 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
97. arpp19b ENSDARG00000039880 4823 0.79 - - - - - 0.790 - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
98. si:ch211-179l5.5 si:ch211-179l5.5 249 0.79 - 0.790 - - - - - - -
99. HDAC5 ENSDARG00000075139 1287 0.79 - - - - - - 0.790 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
100. bdh1 ENSDARG00000059388 3390 0.79 - - - - - - 0.790 - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]

There are 609 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA