Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sdhdb

Gene Name Gene ID Reads Annotation
sdhdb ENSDARG00000030139 9761 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]










Genes with expression patterns similar to sdhdb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdhdb ENSDARG00000030139 9761 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
2. fitm1 ENSDARG00000056464 1759 3.7 0.798 - - - - 0.759 0.717 0.722 0.704 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
3. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 3.532 0.861 - 0.913 0.955 - 0.803 - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
4. dars ENSDARG00000070043 6854 3.344 0.780 - - - 0.854 - 0.933 - 0.777 aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
5. ola1 ENSDARG00000044565 22424 3.313 0.733 - - 0.942 - 0.858 - - 0.780 Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
6. cct3 ENSDARG00000016173 15869 3.297 0.764 0.907 - 0.903 - - 0.723 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
7. ndufab1b ENSDARG00000014915 12796 3.264 0.812 - - - 0.832 - 0.907 0.713 - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
8. eif2s1b ENSDARG00000052178 11961 3.189 - 0.745 0.949 - - 0.788 0.707 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
9. txlnbb ENSDARG00000076241 6396 3.097 0.864 - - - - 0.809 0.706 - 0.718 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
10. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.076 0.819 - - - - 0.785 0.709 - 0.763 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
11. chrna1 ENSDARG00000009021 2931 3.07 0.826 - - - - 0.820 0.719 - 0.705 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
12. nexn ENSDARG00000057317 10972 3.053 0.823 - - - - 0.761 0.721 - 0.748 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
13. tnnt2d ENSDARG00000002988 7590 3.016 0.770 - - - - 0.741 0.714 - 0.791 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
14. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.983 0.753 - - - - 0.796 0.706 - 0.728 NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
15. PTGES3L PTGES3L 4801 2.976 0.771 - - - - 0.766 0.710 - 0.729
16. mdh1b ENSDARG00000018008 3196 2.952 0.718 - - - - 0.791 0.733 - 0.710 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
17. ndufv1 ENSDARG00000036438 8437 2.821 - - - 0.981 - 0.890 0.950 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
18. cdkn1c cdkn1c 17427 2.573 0.717 0.887 - 0.969 - - - - -
19. rps25 ENSDARG00000041811 52182 2.51 0.733 - - - - 0.859 0.918 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
20. cox7c ENSDARG00000104537 12169 2.507 0.860 - - - 0.817 0.830 - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
21. hccs hccs 1758 2.499 - 0.875 - - 0.817 0.807 - - -
22. ntmt1 ENSDARG00000022399 5779 2.481 0.863 - - - - 0.874 0.744 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
23. pdhb ENSDARG00000021346 9088 2.477 0.730 - - - 0.859 - 0.888 - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
24. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 2.457 0.744 - - - - - 0.906 - 0.807 ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
25. six1b ENSDARG00000026473 1908 2.424 - - 0.962 - - 0.744 0.718 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
26. SYNPO2 SYNPO2 7382 2.416 - - - - - 0.720 0.899 - 0.797
27. cyc1 ENSDARG00000038075 16699 2.413 0.744 - - - - 0.799 0.870 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
28. flncb ENSDARG00000018820 5595 2.407 0.815 0.873 - - - - 0.719 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
29. atp5g1 51897 2.399 0.853 - 0.764 - - - - - 0.782 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
30. ndufv3 ENSDARG00000090389 4829 2.399 - 0.893 - - - 0.715 - - 0.791 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
31. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 2.377 0.730 0.916 - - - 0.731 - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
32. ndufs3 ENSDARG00000015385 7790 2.365 0.739 - - - - 0.854 - - 0.772 NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
33. mrps15 ENSDARG00000109289 3258 2.362 0.721 - 0.858 - 0.783 - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
34. klhl41b ENSDARG00000006757 10762 2.353 0.861 - - - - - 0.737 - 0.755 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
35. cycsb ENSDARG00000044562 40227 2.351 - - - - - 0.924 0.716 0.711 - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
36. smyd2b ENSDARG00000005629 8181 2.348 0.804 - - - - 0.830 - - 0.714 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
37. SYNPO2L SYNPO2L 6697 2.348 0.767 - - - - 0.813 - - 0.768
38. ndufa10 ENSDARG00000013333 6597 2.348 - - - - - 0.709 0.908 0.731 - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
39. murca murca 6614 2.348 0.799 - - - - 0.848 - - 0.701
40. zgc:158296 ENSDARG00000070923 3935 2.346 - - - - - 0.828 0.712 - 0.806 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
41. faua ENSDARG00000099022 82901 2.335 0.718 - 0.782 - - - 0.835 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
42. apobec2a ENSDARG00000018881 4790 2.326 0.824 - - - - - - 0.779 0.723 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
43. sgcd ENSDARG00000098573 4980 2.324 0.716 0.888 - - - - 0.720 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
44. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.315 0.761 - - - - 0.772 - 0.782 - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
45. CU633479.5 ENSDARG00000114818 1815 2.313 0.706 - - - - 0.883 0.724 - -
46. PTPLA PTPLA 4044 2.312 0.808 - - - - 0.799 0.705 - -
47. ing5b ENSDARG00000068175 2502 2.311 - 0.826 - - 0.776 0.709 - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
48. si:ch211-156j16.1 ENSDARG00000092035 7441 2.306 0.812 - - - - - 0.723 - 0.771 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
49. sucla2 ENSDARG00000005359 5992 2.303 0.768 - - - - 0.773 - - 0.762 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
50. sgcb ENSDARG00000052341 4168 2.3 - - - - - - 0.873 0.706 0.721 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
51. sh3bgr ENSDARG00000021633 3498 2.295 0.764 - - - - 0.813 0.718 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
52. atp5e 14858 2.294 0.821 - - - - - 0.718 - 0.755 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
53. bves ENSDARG00000058548 2291 2.285 0.711 0.873 - - - 0.701 - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
54. xirp2a ENSDARG00000071113 7113 2.282 0.825 - - - - 0.747 0.710 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
55. atp5d 20825 2.28 - - 0.792 - - 0.706 0.782 - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
56. ndufs1 ENSDARG00000028546 5795 2.278 0.796 - - - - - 0.744 0.738 - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
57. zgc:92518 ENSDARG00000016343 3837 2.273 0.810 - - - - 0.729 0.734 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
58. tmem161a ENSDARG00000012790 16094 2.273 0.827 - - - - - 0.706 - 0.740 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
59. myod1 ENSDARG00000030110 6019 2.257 0.797 - - - - - 0.722 - 0.738 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
60. ATP5J_2 ATP5J_2 2381 2.248 - - - - - 0.741 0.740 0.767 -
61. smtnl1 ENSDARG00000041257 7410 2.239 0.811 - - - - - 0.720 - 0.708 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
62. usp2a ENSDARG00000020107 2586 2.237 0.744 - - - - 0.774 - - 0.719 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
63. znf106a ENSDARG00000016651 6049 2.232 0.803 - - - - - 0.721 - 0.708 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
64. chchd3 chchd3 4139 2.226 0.741 - - - - 0.754 0.731 - -
65. sox6 ENSDARG00000015536 7728 2.201 0.742 - - - - 0.717 - - 0.742 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
66. klhl40b ENSDARG00000019125 3633 2.2 0.724 - - - - - 0.751 - 0.725 kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
67. phb ENSDARG00000057414 9551 2.196 0.735 - - - - - 0.726 - 0.735 prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
68. chrnd ENSDARG00000019342 2728 2.194 0.752 - - - - - 0.704 - 0.738 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
69. myoz2a ENSDARG00000012311 1373 2.187 0.724 - - - - 0.749 0.714 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
70. ryr3 ENSDARG00000071331 6795 2.182 0.724 - - - - 0.738 0.720 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
71. gypc ENSDARG00000041546 1487 2.174 0.723 - - - - 0.744 0.707 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
72. prx ENSDARG00000017246 6183 2.171 0.729 - - - - - 0.735 - 0.707 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
73. zgc:92113 1738 2.167 - - - - - 0.743 0.706 - 0.718 zgc:92113
74. EHBP1L1 EHBP1L1 2500 2.12 0.702 - - - - 0.705 0.713 - -
75. plxnb1b ENSDARG00000017211 4676 1.926 - - 0.956 0.970 - - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
76. si:rp71-45k5.4 ENSDARG00000035679 10411 1.907 - 0.941 - 0.966 - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
77. chmp2bb ENSDARG00000002190 4629 1.884 - 0.897 - 0.987 - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
78. aldh4a1 ENSDARG00000038207 4639 1.844 - 0.854 - 0.990 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
79. PELP1 ENSDARG00000079313 5771 1.841 - 0.892 0.949 - - - - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
80. nup155 ENSDARG00000001777 3417 1.833 - - 0.846 0.987 - - - - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
81. CPT1A CPT1A 4004 1.823 - 0.869 0.954 - - - - - -
82. anapc16 ENSDARG00000013822 5857 1.819 - 0.866 - 0.953 - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
83. lrpprc ENSDARG00000043970 3847 1.818 - - - 0.983 0.835 - - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
84. ndrg2 ENSDARG00000011170 11442 1.807 - - - 0.967 - - 0.840 - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
85. stip1 ENSDARG00000004906 7742 1.785 0.792 - - 0.993 - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
86. CU633999.1 ENSDARG00000098197 2880 1.783 - - - 0.989 0.794 - - - -
87. sepw1 17630 1.779 - - 0.865 0.914 - - - - - selenoprotein W, 1
88. atp5g3a 9539 1.762 - - - - 0.854 - 0.908 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
89. chac1 ENSDARG00000070426 17552 1.761 - - - - - - 0.910 - 0.851 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
90. mrps18a ENSDARG00000024465 5187 1.753 - - 0.982 - - 0.771 - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
91. NDUFB2 ENSDARG00000045490 9141 1.739 - - 0.966 - - 0.773 - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
92. cfl2 ENSDARG00000014106 8051 1.718 0.854 - - - - - 0.864 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
93. pdap1b ENSDARG00000002967 2159 1.718 - 0.888 - - - 0.830 - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
94. hspd1 ENSDARG00000056160 13690 1.718 - - - 0.956 - - 0.762 - - heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
95. tecrb ENSDARG00000025904 4612 1.717 - - - 0.982 - - - - 0.735 trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
96. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.705 0.846 0.859 - - - - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
97. atp5ib 19664 1.699 0.761 - - - - - 0.938 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
98. rpl7l1 ENSDARG00000042864 3256 1.696 0.794 0.902 - - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
99. pias4a ENSDARG00000007081 4264 1.695 - - 0.912 - 0.783 - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
100. abcf1 ENSDARG00000031795 8635 1.695 0.803 0.892 - - - - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]

There are 1262 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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