Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdhc

Gene Name Gene ID Reads Annotation
sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]










Genes with expression patterns similar to sdhc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
2. ndufab1b ENSDARG00000014915 12796 2.615 - 0.822 - - - 0.951 0.842 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
3. eif3f ENSDARG00000077533 24387 2.476 0.761 - - - - 0.950 0.765 - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
4. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 2.459 - 0.754 0.767 - - 0.938 - - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
5. serbp1a_1 ENSDARG00000074242 13588 2.429 0.878 - - - - 0.709 0.842 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
6. aqr ENSDARG00000016775 1581 1.904 - - 0.952 - - 0.952 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
7. CABZ01079490.1 CABZ01079490.1 1808 1.903 - - 0.949 - - 0.954 - - -
8. necap2 ENSDARG00000046002 4372 1.892 0.935 - 0.957 - - - - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
9. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.883 0.912 - - - - 0.971 - - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
10. ppapdc1b ppapdc1b 2866 1.876 0.953 - 0.923 - - - - - -
11. nxf1 ENSDARG00000055076 3251 1.872 0.955 - 0.917 - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
12. ptgs1 ENSDARG00000052148 2443 1.862 0.901 - 0.961 - - - - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
13. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.833 0.953 - - - - - 0.880 - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
14. gtf2a1 ENSDARG00000011000 2026 1.83 0.957 - 0.873 - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
15. prkca ENSDARG00000039241, ENSDARG00000115657 2136 1.81 - - - - - 0.943 - - 0.867 protein kinase C, alpha [Source:ZFIN;Acc:ZDB-GENE-050208-100]
16. aplp2 ENSDARG00000054864 7958 1.781 - - - - - 0.966 0.815 - - amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
17. atp5ib 19664 1.777 - - - - - - 0.915 - 0.862 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
18. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.746 - - 0.950 - - - - - 0.796 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
19. hadh ENSDARG00000030765 3406 1.746 0.966 - - - - - 0.780 - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
20. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.743 - - 0.789 - - 0.954 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
21. chpt1 ENSDARG00000014572 2926 1.739 - 0.800 - - - 0.939 - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
22. ywhah ENSDARG00000005560 11079 1.737 - - - - - 0.958 0.779 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
23. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.735 - - - - - 0.975 - 0.760 - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
24. minos1 ENSDARG00000101619 5273 1.732 - 0.762 - - - 0.970 - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
25. atp5j 4272 1.729 0.943 0.786 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
26. serpinh1a ENSDARG00000075954 6488 1.72 0.963 - - - - - - - 0.757 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
27. suclg1 ENSDARG00000052712 17570 1.714 0.825 - - - - 0.889 - - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
28. dars ENSDARG00000070043 6854 1.713 - - - - - 0.957 0.756 - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
29. sf3b2 ENSDARG00000018049 4675 1.711 0.820 - 0.891 - - - - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
30. jph1b ENSDARG00000038826 7416 1.708 - - - - - 0.970 0.738 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
31. st13 ENSDARG00000021973 7787 1.708 0.961 - - - - - - - 0.747 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
32. ndufa10 ENSDARG00000013333 6597 1.699 - 0.791 - - - - 0.908 - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
33. eif4ebp3l ENSDARG00000041607 5257 1.693 - 0.728 - - - 0.965 - - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
34. cyc1 ENSDARG00000038075 16699 1.69 - - 0.884 - - - 0.806 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
35. sf3b4 ENSDARG00000018574 7470 1.687 0.958 0.729 - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
36. qars ENSDARG00000010316 2715 1.686 - 0.734 0.952 - - - - - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
37. tcf12 ENSDARG00000004714 7606 1.685 - 0.732 - - - 0.953 - - - transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
38. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.685 - 0.731 - - - 0.954 - - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
39. rbm4.2 ENSDARG00000055080 5241 1.68 - 0.731 - - - 0.949 - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
40. gnb4b ENSDARG00000115383 7457 1.68 - 0.721 - - - 0.959 - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
41. myef2 ENSDARG00000059398 6050 1.675 0.949 0.726 - - - - - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
42. txnipa ENSDARG00000036107 8863 1.675 0.948 - - - - - 0.727 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
43. uqcrc2a ENSDARG00000014794 3949 1.674 0.952 0.722 - - - - - - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
44. dennd5a ENSDARG00000017006 3426 1.662 - 0.705 0.957 - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
45. npepps ENSDARG00000044943, ENSDARG00000110180, ENSDARG00000116096 3572 1.662 - 0.715 0.947 - - - - - - aminopeptidase puromycin sensitive [Source:ZFIN;Acc:ZDB-GENE-060524-3]
46. srsf3b ENSDARG00000059360 14888 1.658 0.916 - - - - - 0.742 - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
47. ctnna1 ENSDARG00000102441 7984 1.658 - 0.783 - - - - - - 0.875 catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
48. hnrpdl 14288 1.657 - - 0.905 - - - 0.752 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
49. SNRPG ENSDARG00000099667 18697 1.657 0.874 0.783 - - - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
50. atpif1a 6030 1.653 - - 0.938 - - - 0.715 - - ATPase inhibitory factor 1a
51. arpc2 ENSDARG00000075989 22423 1.653 0.930 0.723 - - - - - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
52. fkbp3 ENSDARG00000098059 5428 1.641 0.936 - 0.705 - - - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
53. cox7a3 20842 1.633 - - - - - - 0.911 0.722 - cytochrome c oxidase subunit VIIa polypeptide 3
54. gltscr2 gltscr2 5763 1.628 - - 0.923 - - - 0.705 - -
55. ube2nb ENSDARG00000045877 4583 1.627 - 0.739 0.888 - - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
56. ube2a ENSDARG00000098466 12765 1.61 0.835 - 0.775 - - - - - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
57. ap2m1a ENSDARG00000002790 9781 1.598 - - 0.792 - - - 0.806 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
58. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.598 - 0.714 0.884 - - - - - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
59. tnw 16679 1.596 - - 0.888 - - 0.708 - - - tenascin W, transcript variant X2
60. plecb ENSDARG00000021987 13621 1.588 - - 0.793 - - - 0.795 - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
61. CABZ01081490.1 ENSDARG00000111653 11892 1.582 - - 0.848 - - - 0.734 - -
62. crtap ENSDARG00000018010 7722 1.58 - 0.771 - - - - 0.809 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
63. hif1al ENSDARG00000100826 18627 1.576 - - 0.821 - - - 0.755 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
64. znf106a ENSDARG00000016651 6049 1.574 - 0.706 0.868 - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
65. ndufb7 ENSDARG00000033789 5898 1.571 - 0.785 - - - - 0.786 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
66. tmod4 ENSDARG00000020890 17436 1.556 0.767 - - - - 0.789 - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
67. AP2A1 ENSDARG00000054320 5591 1.549 - 0.794 - - - 0.755 - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
68. arglu1a ENSDARG00000019223 8716 1.547 0.810 0.737 - - - - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
69. ndufb11 ENSDARG00000043467 7495 1.538 - - 0.833 - - - 0.705 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
70. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.535 - - - - - 0.722 0.813 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
71. cdc42 ENSDARG00000044573 11795 1.532 - 0.790 - - - - 0.742 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
72. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.516 - 0.812 - - - - - 0.704 - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
73. atp5c1 31368 1.515 0.749 - - - - - - - 0.766 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
74. rps18 ENSDARG00000100392 64615 1.512 0.746 - - - - - 0.766 - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
75. EML4_1 EML4_1 8736 1.511 - 0.785 - - - - 0.726 - -
76. got2b ENSDARG00000005840 7891 1.502 - 0.772 - - - 0.730 - - - glutamic-oxaloacetic transaminase 2b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7917]
77. atp5d 20825 1.5 - 0.776 - - - - 0.724 - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
78. cnih cnih 8292 1.485 - 0.714 - - - - 0.771 - -
79. emc6 ENSDARG00000035282 4981 1.462 - 0.734 - - - - 0.728 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
80. srrm1 ENSDARG00000001244 4972 1.458 - 0.733 - - - - - 0.725 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
81. atp5h 18018 1.443 - 0.735 - - - - - - 0.708 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
82. ndufs3 ENSDARG00000015385 7790 1.437 - - - 0.735 0.702 - - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
83. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.435 - 0.727 - - - - 0.708 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
84. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.425 - - - - - - 0.714 0.711 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
85. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 0.979 - - - - - 0.979 - - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
86. COL22A1 COL22A1 4473 0.978 - - - - - 0.978 - - -
87. tnnt2c ENSDARG00000032242 28801 0.976 - - - - - 0.976 - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
88. pfdn1 ENSDARG00000014536 6969 0.971 - - - - - 0.971 - - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
89. sdhb ENSDARG00000075768 5493 0.97 - - - - - 0.970 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
90. NDNF ENSDARG00000062936 7287 0.97 - - - - - 0.970 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
91. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.97 - - - - - 0.970 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
92. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.969 - - - - - 0.969 - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
93. Sep-02 Sep-02 10074 0.969 0.969 - - - - - - - -
94. ciao1 ENSDARG00000059212 1222 0.968 - - 0.968 - - - - - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
95. sh3rf1 ENSDARG00000070470 1463 0.968 - - 0.968 - - - - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
96. znf259 znf259 1819 0.968 - - 0.968 - - - - - -
97. syne2b ENSDARG00000053484 9225 0.967 - - - - - 0.967 - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
98. pbxip1a ENSDARG00000071015 4960 0.967 - - - - - 0.967 - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
99. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 0.967 0.967 - - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
100. ndufa2 ENSDARG00000021984 4754 0.967 - - - - - 0.967 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]

There are 919 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA