Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sdhb

Gene Name Gene ID Reads Annotation
sdhb ENSDARG00000075768 5493 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]










Genes with expression patterns similar to sdhb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdhb ENSDARG00000075768 5493 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
2. scrt2 ENSDARG00000056175 4331 2.916 - - 0.967 0.990 - - - - 0.959 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
3. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 2.891 - 0.954 0.960 - - 0.977 - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
4. ndrg3a ENSDARG00000013087 5581 2.857 - 0.874 - 0.994 - - - - 0.989 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
5. eif2s1b ENSDARG00000052178 11961 2.737 - - 0.943 - - - 0.847 - 0.947 eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
6. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 2.614 - - 0.868 - - 0.973 0.773 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
7. ndufab1b ENSDARG00000014915 12796 2.611 - - - 0.973 - 0.905 0.733 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
8. ptp4a1 ENSDARG00000006242 10267 2.435 - 0.724 - - - 0.942 0.769 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
9. sumo2b ENSDARG00000102741 18514 2.357 - 0.790 0.715 - - - - - 0.852 small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
10. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.333 - 0.890 - - - 0.706 0.737 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
11. rbbp6 ENSDARG00000037919 4813 2.309 0.738 0.770 - - - - 0.801 - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
12. fam96b 2255 1.982 - - - 0.991 - - - - 0.991 family with sequence similarity 96, member B
13. cry2a cry2a 2728 1.98 - - 0.987 - - 0.993 - - -
14. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.98 - - - 0.990 - - - - 0.990 Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
15. shfm1 7620 1.973 - - - 0.984 - - - - 0.989 split hand/foot malformation (ectrodactyly) type 1
16. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.96 - 0.967 - - - 0.993 - - -
17. map1lc3b ENSDARG00000101127 3958 1.95 - 0.961 - - - 0.989 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
18. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.947 - 0.955 - - - 0.992 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
19. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 1.94 - 0.951 - - - - - - 0.989 translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
20. aqr ENSDARG00000016775 1581 1.938 - 0.946 - - - 0.992 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
21. dars ENSDARG00000070043 6854 1.937 - 0.962 - - - 0.975 - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
22. acadsb ENSDARG00000076780 2382 1.936 - 0.943 - 0.993 - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
23. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.928 - - - - - 0.954 - - 0.974 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
24. eif4ebp2 ENSDARG00000031819 13168 1.921 - 0.957 - 0.964 - - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
25. pl10 pl10 10795 1.917 - - - 0.958 - - - - 0.959
26. arcn1b ENSDARG00000031214 4529 1.912 - 0.930 0.982 - - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
27. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.885 - 0.966 0.919 - - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
28. gmppb ENSDARG00000017658 3484 1.877 - 0.912 0.965 - - - - - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
29. ndufs1 ENSDARG00000028546 5795 1.854 - 0.975 - - - - 0.879 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
30. aqp3a ENSDARG00000003808 9044 1.847 - 0.933 - - - - - - 0.914 aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
31. acap3a ENSDARG00000075990 9652 1.842 - - - - - - 0.855 - 0.987 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
32. minos1 ENSDARG00000101619 5273 1.835 - - - - - 0.989 0.846 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
33. mrps21 ENSDARG00000070985 3943 1.834 - - 0.971 - - - 0.863 - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
34. ube2e2 ENSDARG00000034670 5918 1.826 - 0.951 0.875 - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
35. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 1.825 - 0.834 - - - 0.991 - - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
36. atpif1a 6030 1.812 - 0.909 - - - - 0.903 - - ATPase inhibitory factor 1a
37. rps8a ENSDARG00000055996 2785 1.811 - - - 0.991 - - 0.820 - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
38. hadhaa ENSDARG00000057128 2179 1.808 - - 0.988 - - - 0.820 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
39. tmed9 ENSDARG00000004261 10013 1.797 - - - - - 0.977 0.820 - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
40. dyrk2 ENSDARG00000094646 2163 1.796 - - - - - 0.993 0.803 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
41. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.796 - - - - - 0.970 0.826 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
42. eif2s3 ENSDARG00000008292 17051 1.794 - - 0.854 - - - - - 0.940 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
43. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.787 - - - - - 0.984 0.803 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
44. HNRNPA2B1 HNRNPA2B1 14997 1.779 - - 0.811 - - 0.968 - - -
45. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.779 - 0.898 - - - - 0.881 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
46. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.772 - - - - - - 0.779 - 0.993 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
47. syne2b ENSDARG00000053484 9225 1.767 - - - - - 0.977 0.790 - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
48. ube2v2 ENSDARG00000028198 23341 1.766 - - - 0.972 - - 0.794 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
49. C22H19orf70 C22H19orf70 4393 1.766 - - - - - - 0.774 - 0.992
50. cttnbp2 ENSDARG00000040991 1697 1.763 - 0.950 - - - - 0.813 - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
51. vash2 ENSDARG00000007774 2537 1.757 - - - - - 0.994 0.763 - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
52. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.751 - - - - - 0.899 0.852 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
53. PYURF ENSDARG00000045773 4576 1.75 - - - - - 0.997 0.753 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
54. MRPL21 ENSDARG00000003846 3244 1.75 - - - - - - 0.756 - 0.994 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
55. tjp1a ENSDARG00000077506 2658 1.748 - - - - - 0.991 0.757 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
56. mrpl15 ENSDARG00000101306 2796 1.745 - - 0.985 - - - 0.760 - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
57. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.745 - - - - - 0.978 0.767 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
58. pfdn4 ENSDARG00000061228 8266 1.742 - 0.925 - - - - 0.817 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
59. mrps18a ENSDARG00000024465 5187 1.742 - - 0.982 - - - 0.760 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
60. tnnt2c ENSDARG00000032242 28801 1.742 - - - - - 0.990 0.752 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
61. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.741 - - - - - 0.990 0.751 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
62. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.738 - - 0.989 - - - 0.749 - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
63. rab13 ENSDARG00000034771 3065 1.736 - - - - - 0.996 0.740 - - RAB13, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-30]
64. ppp1r3cb ENSDARG00000014554 2507 1.733 - - - - - 0.981 0.752 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
65. fermt2 ENSDARG00000020242 9351 1.732 - 0.941 - - - - 0.791 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
66. ppp2r2a ppp2r2a 5785 1.731 - - - - - - 0.742 - 0.989
67. pbxip1a ENSDARG00000071015 4960 1.729 - - - - - 0.983 0.746 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
68. sec23b ENSDARG00000019360 6210 1.721 - - - - - 0.748 - - 0.973 Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
69. pkd2 ENSDARG00000014098 2384 1.721 - 0.956 - - - - 0.765 - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
70. meis4.1a meis4.1a 1165 1.719 - 0.952 - - - - 0.767 - -
71. ppp1r14bb ENSDARG00000030161 2349 1.708 - - 0.984 - - - 0.724 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
72. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.708 - - - - - 0.993 0.715 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
73. NRAP ENSDARG00000009341 3565 1.707 - - - - - - 0.722 - 0.985 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
74. rap2c ENSDARG00000015649 4709 1.705 - 0.947 - - - - 0.758 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
75. serbp1a_1 ENSDARG00000074242 13588 1.704 - - - 0.954 - 0.750 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
76. gyg1a ENSDARG00000011934 2276 1.704 - 0.963 - - - - 0.741 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
77. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.702 - - - - - 0.994 0.708 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
78. Sep-02 Sep-02 10074 1.702 - - - 0.977 - - 0.725 - -
79. irf2bp2a ENSDARG00000004702 6719 1.702 - - - - - 0.984 0.718 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
80. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.7 - - - - - 0.974 0.726 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
81. EEF1E1 ENSDARG00000071774 3806 1.7 - - - 0.994 - - 0.706 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
82. anxa1a ENSDARG00000026726 23173 1.697 - 0.741 - 0.956 - - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
83. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.697 - - 0.969 - - - 0.728 - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
84. si:ch211-121a2.2 ENSDARG00000039682 1240 1.695 - 0.959 - - - - 0.736 - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
85. NDNF ENSDARG00000062936 7287 1.692 - - - - - 0.979 0.713 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
86. ltv1 ENSDARG00000008490 2403 1.691 - - - - - - 0.700 - 0.991 LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
87. flot1b ENSDARG00000037998 13600 1.676 - - - 0.973 0.703 - - - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
88. strn3 ENSDARG00000001729 4608 1.673 - 0.963 - - - - 0.710 - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
89. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.672 - - - - - 0.954 0.718 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
90. PSIP1 PSIP1 5252 1.669 - 0.947 - - - - 0.722 - -
91. tecrb ENSDARG00000025904 4612 1.668 0.731 0.937 - - - - - - - trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
92. atp5d 20825 1.667 - - 0.759 - - - - - 0.908 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
93. rnf7 ENSDARG00000055524 3390 1.664 - 0.963 - - - - 0.701 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
94. rp9 ENSDARG00000098942 3172 1.662 - 0.962 - - - - 0.700 - - RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
95. fxr1 ENSDARG00000022968 2831 1.661 - 0.942 - - - - 0.719 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
96. erlin1 ENSDARG00000021991 5664 1.657 - 0.945 - - - - 0.712 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
97. adss ENSDARG00000002071 5497 1.656 - 0.929 - - - - 0.727 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
98. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.655 - 0.947 - - - - 0.708 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
99. fkbp1aa ENSDARG00000022684 74052 1.65 - - - - - - 0.848 - 0.802 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
100. eif3i ENSDARG00000017445 21149 1.643 - - - - - 0.749 0.894 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]

There are 1235 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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