Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdhaf1

Gene Name Gene ID Reads Annotation
sdhaf1 ENSDARG00000092478 51 succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]










Genes with expression patterns similar to sdhaf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdhaf1 ENSDARG00000092478 51 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
2. zgc:110434 21 2 - 1.000 - - - 1.000 - - - zgc:110434
3. si:ch211-218c6.9 si:ch211-218c6.9 40 2 - 1.000 - - - 1.000 - - -
4. si:ch211-113a14.15_1 2 2 - 1.000 - - - 1.000 - - - si:ch211-113a14.15
5. si:ch211-198c19.1 ENSDARG00000089333 3 2 - 1.000 - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
6. TMC2 TMC2 5 2 - 1.000 - - - 1.000 - - -
7. si:ch211-122l14.7 ENSDARG00000095576 5 2 - 1.000 - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
8. camk1db ENSDARG00000017446 47 1.959 - 1.000 - - - 0.959 - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
9. CABZ01066439.2 CABZ01066439.2 5 1.942 - 1.000 - - - - - - 0.942
10. si:ch211-204c5.6 si:ch211-204c5.6 7 1.93 0.930 1.000 - - - - - - -
11. si:ch211-265m20.8 120 1.93 0.930 1.000 - - - - - - - si:ch211-265m20.8, transcript variant X1
12. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1.93 0.930 1.000 - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
13. si:ch1073-185p12.2 ENSDARG00000100199 7 1.897 - - - - - 1.000 - - 0.897 si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
14. cyp2j20 ENSDARG00000094057 44 1.883 - 1.000 - - - 0.883 - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
15. PPFIBP1 PPFIBP1 46 1.881 - 0.881 - - - 1.000 - - -
16. lmx1a ENSDARG00000020354 111 1.859 - 1.000 - - - 0.859 - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
17. NTRK3 NTRK3 163 1.854 - 1.000 - - - 0.854 - - -
18. CABZ01036951.1 CABZ01036951.1 71 1.731 - - - - - 1.000 0.731 - -
19. Metazoa_SRP_30 Metazoa_SRP_30 10 1.715 - - - - - 0.859 - - 0.856
20. fbxo43 ENSDARG00000104186 40 1.714 - - - 0.714 - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
21. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1.71 - - - 0.710 - 1.000 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
22. GPR156 ENSDARG00000086215 126 1.669 0.923 0.746 - - - - - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
23. C2H3orf58 C2H3orf58 39 1.664 0.924 - - - - 0.740 - - -
24. CR407594.2 CR407594.2 145 1.599 0.858 - - - 0.741 - - - -
25. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.56 - - - - - - 0.841 - 0.719 glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
26. SNX20 ENSDARG00000045554 77 1.558 0.832 - - - - - 0.726 - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
27. gsg1l ENSDARG00000037390 181 1.552 0.846 - - 0.706 - - - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
28. spon2b ENSDARG00000002732 115 1.516 - 0.806 - - - - 0.710 - - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
29. hn1a hn1a 115 1.462 - 0.762 - - - - 0.700 - -
30. si:dkey-192g7.3 ENSDARG00000094012 105 1.452 - 0.733 - - - - - - 0.719 si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
31. C14HXorf65 C14HXorf65 49 1 - 1.000 - - - - - - -
32. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
33. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
34. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
35. si:ch211-171b20.3 ENSDARG00000094794 2 1 - - - - - 1.000 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
36. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - 1.000 - - - - - - -
37. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
38. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
39. tpgs2 ENSDARG00000011926 48 1 - - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
40. si:dkey-250k15.4 ENSDARG00000092169 19 1 - - - - - 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
41. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
42. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
43. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
44. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
45. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
46. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
47. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
48. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
49. CU694445.1 ENSDARG00000111931 7 1 - 1.000 - - - - - - -
50. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
51. pif1 ENSDARG00000020289 216 1 - 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
52. HIST1H2BA ENSDARG00000116654 10 1 - 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
53. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
54. veph veph 3 1 - - - - - 1.000 - - -
55. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
56. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
57. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
58. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - - - - 1.000 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
59. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
60. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
61. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
62. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
63. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
64. zeb1a ENSDARG00000016788 48 1 - - - - - 1.000 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
65. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
66. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
67. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
68. U6_32 U6_32 0 1 - 1.000 - - - - - - -
69. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
70. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
71. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
72. tor2a ENSDARG00000100559, ENSDARG00000115324 58 1 - - - - - 1.000 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
73. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
74. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1 - 1.000 - - - - - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
75. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
76. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
77. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
78. si:dkey-117n7.4 ENSDARG00000092064 22 1 - - - - - 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
79. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - - - - - 1.000 - - -
80. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
81. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
82. morc3b ENSDARG00000043271 8 1 - 1.000 - - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
83. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - 1.000 - - - - - - -
84. AGO3 AGO3 12 1 - 1.000 - - - - - - -
85. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
86. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
87. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
88. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
89. hel_dr4 hel_dr4 12 1 - - - - - 1.000 - - -
90. CABZ01113978.1 CABZ01113978.1 1 1 - - - - - 1.000 - - -
91. TGM1 ENSDARG00000017799 3 1 - 1.000 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
92. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - 1.000 - - -
93. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -
94. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
95. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
96. sox12 ENSDARG00000025847 681 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
97. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
98. SRCIN1_1 SRCIN1_1 11 1 - 1.000 - - - - - - -
99. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
100. CACNA2D1 ENSDARG00000073752 6 1 - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]

There are 995 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA