Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdf4

Gene Name Gene ID Reads Annotation
sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]










Genes with expression patterns similar to sdf4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
2. dhrs9 ENSDARG00000019260 250 2.455 0.771 0.984 - - - 0.700 - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
3. copg2 ENSDARG00000034823 4162 1.772 - 0.979 - - - - 0.793 - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
4. arcn1b ENSDARG00000031214 4529 1.767 - 0.958 - - - - 0.809 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
5. FP102272.1 FP102272.1 9473 1.743 - 0.927 - - - 0.816 - - -
6. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 1.733 - 0.986 - - - - 0.747 - - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
7. gmppb ENSDARG00000017658 3484 1.702 - 0.974 - - - - - - 0.728 GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
8. rnf128a ENSDARG00000016867 3146 1.693 - 0.945 - - - 0.748 - - - ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
9. SH3D21 ENSDARG00000099448 1726 1.687 - 0.975 - - - - 0.712 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
10. si:dkey-238c7.12 si:dkey-238c7.12 6600 1.683 - 0.981 - - - - 0.702 - -
11. ddr2l ENSDARG00000103830 1921 1.679 - - - - - 0.953 0.726 - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
12. padi2 ENSDARG00000044167 6765 1.674 - 0.959 - - - - 0.715 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
13. rab5c ENSDARG00000026712 4733 1.66 - 0.900 - - - - 0.760 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
14. vimp 4034 1.655 - 0.941 - - - - 0.714 - - VCP-interacting membrane selenoprotein
15. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.632 - - 0.751 - - - 0.881 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
16. arpc1a ENSDARG00000008383 7353 1.602 - - - - - 0.876 0.726 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
17. nufip2 ENSDARG00000069066 3965 1.59 - - - - - 0.817 0.773 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
18. ywhabl ENSDARG00000040287 39045 1.579 - - - - - 0.817 0.762 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
19. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.537 - - - - - 0.824 0.713 - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
20. si:dkey-253d23.10 7602 1.527 - - - - - 0.822 0.705 - - si:dkey-253d23.10, transcript variant X4
21. mettl5 ENSDARG00000068893 159 1.502 0.707 - - - - - - - 0.795 methyltransferase like 5 [Source:ZFIN;Acc:ZDB-GENE-041010-21]
22. asph ENSDARG00000055945 10835 1.487 - - - - 0.719 0.768 - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
23. yif1a ENSDARG00000019636 2215 1.476 - - - - - 0.738 0.738 - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
24. lgals3l lgals3l 3833 1.473 - - - - 0.758 0.715 - - -
25. ccnd2b ENSDARG00000070408 411 1.458 0.729 - - - - 0.729 - - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
26. si:ch73-52f15.5 ENSDARG00000095400 1368 1.447 - - - - - - 0.715 - 0.732 si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
27. b4galt1 ENSDARG00000002634 1076 1.425 0.721 - - 0.704 - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
28. pex14 ENSDARG00000028322 1087 0.991 - 0.991 - - - - - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
29. sult1st4 ENSDARG00000003181 540 0.989 - 0.989 - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
30. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 0.989 - 0.989 - - - - - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
31. nsun5 ENSDARG00000043209 764 0.988 - 0.988 - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
32. znhit1 ENSDARG00000054574 979 0.988 - 0.988 - - - - - - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
33. nob1 ENSDARG00000016080 2483 0.988 - 0.988 - - - - - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
34. cenpl ENSDARG00000038802 696 0.987 - 0.987 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
35. GABARAPL3 GABARAPL3 1198 0.987 - 0.987 - - - - - - -
36. eif3k ENSDARG00000068289 1102 0.986 - 0.986 - - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
37. zfyve28 ENSDARG00000060430 797 0.986 - 0.986 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
38. ube2e2 ENSDARG00000034670 5918 0.986 - 0.986 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
39. cebpa ENSDARG00000036074 751 0.986 - 0.986 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
40. im:7136729 im:7136729 1625 0.986 - 0.986 - - - - - - -
41. jhdm1da jhdm1da 512 0.986 - 0.986 - - - - - - -
42. mtpn ENSDARG00000104018 4264 0.985 - 0.985 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
43. pacsin2 ENSDARG00000078014 1582 0.985 - 0.985 - - - - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
44. cdk11b ENSDARG00000102546 1579 0.985 - 0.985 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
45. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 0.985 - 0.985 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
46. chpfa ENSDARG00000078392 1427 0.984 - 0.984 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
47. ovol1 1037 0.984 - 0.984 - - - - - - - ovo-like zinc finger 1, transcript variant X1
48. appl1 1019 0.984 - 0.984 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
49. tpi1a ENSDARG00000025012 562 0.984 - 0.984 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
50. aqr ENSDARG00000016775 1581 0.984 - 0.984 - - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
51. KLF8 ENSDARG00000060661 219 0.983 - 0.983 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
52. tnfrsf19 ENSDARG00000041869 796 0.983 - 0.983 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
53. si:dkey-11e23.9 ENSDARG00000095586 114 0.983 - 0.983 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
54. sept8b ENSDARG00000014233 223 0.983 - 0.983 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
55. ppp1r14ba ENSDARG00000044541 792 0.983 - 0.983 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
56. mis18a ENSDARG00000035333 555 0.983 - 0.983 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
57. scn3b ENSDARG00000062359 242 0.983 - 0.983 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
58. ptk6a ENSDARG00000017947 682 0.983 - 0.983 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
59. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.983 - 0.983 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
60. capn2b ENSDARG00000055592 5431 0.983 - 0.983 - - - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
61. mxra7 ENSDARG00000095300 332 0.983 - 0.983 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
62. prrx1b ENSDARG00000042027 1128 0.983 - 0.983 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
63. u2surp ENSDARG00000061490 2814 0.983 - 0.983 - - - - - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
64. slc31a2 ENSDARG00000076092 251 0.983 - 0.983 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
65. SETDB2 ENSDARG00000101462 249 0.983 - 0.983 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
66. pank1b ENSDARG00000010098 3202 0.983 - 0.983 - - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
67. RCSD1 RCSD1 144 0.982 - 0.982 - - - - - - -
68. tox4 tox4 1671 0.982 - 0.982 - - - - - - -
69. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.982 - 0.982 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
70. wipf1 wipf1 760 0.982 - 0.982 - - - - - - -
71. pip4k2aa ENSDARG00000003776 865 0.982 - 0.982 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
72. BRCC3 ENSDARG00000098242 1123 0.982 - 0.982 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
73. ptpn4b ENSDARG00000000183 425 0.982 - 0.982 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
74. zgc:123295 ENSDARG00000056324 361 0.982 - 0.982 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
75. csrnp2 ENSDARG00000075972 1650 0.982 - 0.982 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
76. eny2 ENSDARG00000070046 3741 0.982 - 0.982 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
77. larp1 ENSDARG00000101722 976 0.982 - 0.982 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
78. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.982 - 0.982 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
79. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.982 - 0.982 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
80. DUSP28 ENSDARG00000059695 1135 0.982 - 0.982 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
81. acadsb ENSDARG00000076780 2382 0.982 - 0.982 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
82. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.982 - 0.982 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
83. sp1 ENSDARG00000088347 1697 0.981 - 0.981 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
84. sirt1 ENSDARG00000068064 1393 0.981 - 0.981 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
85. arid1ab ENSDARG00000101891 1722 0.981 - 0.981 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
86. lrrc23 ENSDARG00000006174 234 0.981 - 0.981 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
87. fosl2 ENSDARG00000040623 2041 0.981 - 0.981 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
88. prr12a ENSDARG00000074229 1668 0.981 - 0.981 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
89. ubn2 ubn2 534 0.981 - 0.981 - - - - - - -
90. cnot3b ENSDARG00000019842 838 0.981 - 0.981 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
91. ptpn9a ENSDARG00000077495 2295 0.981 - 0.981 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
92. tpst1 ENSDARG00000073872 2490 0.981 - 0.981 - - - - - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
93. CHD1 ENSDARG00000103787 1645 0.981 - 0.981 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
94. ptbp3 ENSDARG00000043757 6760 0.981 - 0.981 - - - - - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
95. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 0.981 - 0.981 - - - - - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
96. hsd17b14 ENSDARG00000054842 1394 0.981 - 0.981 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
97. pfkfb3 ENSDARG00000001953 656 0.98 - 0.980 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
98. AL929204.1 AL929204.1 773 0.979 - 0.979 - - - - - - -
99. setd7 ENSDARG00000038858 1072 0.979 - 0.979 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
100. fam20a ENSDARG00000079486 1199 0.979 - 0.979 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]

There are 678 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA