Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdf2l1

Gene Name Gene ID Reads Annotation
sdf2l1 ENSDARG00000035631 615 stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]










Genes with expression patterns similar to sdf2l1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdf2l1 ENSDARG00000035631 615 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]
2. tmed8 ENSDARG00000052390 469 2.219 - - - - - 0.765 0.740 - 0.714 transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
3. atp10a ENSDARG00000061039, ENSDARG00000110280 869 1.748 - - 0.924 - - 0.824 - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
4. BX649554.3_1 BX649554.3_1 1071 1.72 - 0.784 0.936 - - - - - -
5. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.698 - - 0.895 - - 0.803 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
6. pelo ENSDARG00000055477 1927 1.682 - 0.756 0.926 - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
7. zgc:136439 ENSDARG00000009267 720 1.673 - - 0.931 - - - 0.742 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
8. GRAMD4 GRAMD4 1967 1.669 - 0.836 - - - 0.833 - - -
9. bnipl ENSDARG00000060435 1382 1.66 0.783 - 0.877 - - - - - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
10. MSR1 MSR1 449 1.656 - - 0.933 - - 0.723 - - -
11. wnt5b ENSDARG00000102464 1662 1.653 - - 0.933 - - 0.720 - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
12. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.649 0.793 - 0.856 - - - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
13. leprel2 leprel2 812 1.633 - - 0.911 - - - - - 0.722
14. Mar-02 Mar-02 1812 1.633 - - 0.866 - - - 0.767 - -
15. zbtb22b ENSDARG00000003251 956 1.618 - - 0.908 - - 0.710 - - - zinc finger and BTB domain containing 22b [Source:ZFIN;Acc:ZDB-GENE-010110-4]
16. IER2 IER2 604 1.612 - - 0.909 - - - 0.703 - -
17. mst4 mst4 1672 1.599 - - 0.882 - - - - - 0.717
18. haus1 ENSDARG00000058968 1336 1.583 - - - - - 0.749 0.834 - - HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
19. ralgps2 ENSDARG00000026519 1610 1.56 - - 0.790 - - - 0.770 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
20. wu:fb17f05 wu:fb17f05 13622 1.56 - - - - - 0.830 0.730 - -
21. f2rl1.2 ENSDARG00000077540 822 1.537 - - - - - 0.776 0.761 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
22. snx10a ENSDARG00000004405 329 1.531 0.748 - - - - 0.783 - - - sorting nexin 10a [Source:ZFIN;Acc:ZDB-GENE-050809-44]
23. SRR SRR 544 1.528 - 0.793 - - - - - - 0.735
24. snx11 ENSDARG00000052522 1030 1.528 - - - - - - 0.789 - 0.739 sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
25. ift46 ENSDARG00000011240 2499 1.5 - - 0.767 - - 0.733 - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
26. nuak2 ENSDARG00000063661 610 1.496 - - - - - 0.716 0.780 - - NUAK family, SNF1-like kinase, 2 [Source:ZFIN;Acc:ZDB-GENE-050208-563]
27. hoxd11a ENSDARG00000059267 521 1.485 - 0.778 - - - 0.707 - - - homeobox D11a [Source:ZFIN;Acc:ZDB-GENE-990415-117]
28. rcor2 ENSDARG00000008278 1678 1.472 - 0.768 - - - - - 0.704 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
29. col4a4 ENSDARG00000002831 803 1.466 - - - - - 0.764 - - 0.702 collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
30. LIMA1 LIMA1 908 1.46 - - - - - 0.712 0.748 - -
31. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.455 0.730 - - - - - 0.725 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
32. srprb ENSDARG00000030949 1670 1.427 - - - - - - 0.717 - 0.710 SRP receptor subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-311]
33. usp39 ENSDARG00000041908 501 0.971 - - - - - - 0.971 - - ubiquitin specific peptidase 39 [Source:ZFIN;Acc:ZDB-GENE-030131-966]
34. rgs17 ENSDARG00000039435 590 0.96 - - 0.960 - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
35. alg9 ENSDARG00000012840 631 0.958 - - - - - 0.958 - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
36. F8A3 F8A3 646 0.957 - - 0.957 - - - - - -
37. C3H16orf58 C3H16orf58 487 0.956 - - 0.956 - - - - - -
38. zgc:85910 zgc:85910 299 0.955 - - 0.955 - - - - - -
39. cog2 ENSDARG00000004037 462 0.954 - - 0.954 - - - - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
40. vps72 1164 0.952 - - 0.952 - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
41. b4galt4 ENSDARG00000104042 1479 0.952 - - 0.952 - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041114-103]
42. fat3a ENSDARG00000033840 902 0.95 - - 0.950 - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
43. antxr1c ENSDARG00000063612 3203 0.949 - - 0.949 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
44. arhgap29b ENSDARG00000017748 812 0.948 - - 0.948 - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
45. cc2d2a ENSDARG00000090971 363 0.947 - - 0.947 - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
46. agfg1b ENSDARG00000019526 472 0.947 - - 0.947 - - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
47. fzd2 ENSDARG00000054438 585 0.947 - - 0.947 - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
48. CU929394.1 CU929394.1 405 0.945 - - 0.945 - - - - - -
49. TRAK1 212 0.944 - - 0.944 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
50. tada2b ENSDARG00000003769 507 0.944 - - - - - - 0.944 - - transcriptional adaptor 2B [Source:ZFIN;Acc:ZDB-GENE-050522-557]
51. PLA2G3_1 PLA2G3_1 411 0.943 - - 0.943 - - - - - -
52. pcdh8 ENSDARG00000006467 317 0.943 - - 0.943 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
53. TATDN3 ENSDARG00000044072 914 0.941 - - 0.941 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
54. crabp1b ENSDARG00000035904 2753 0.94 - - 0.940 - - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
55. RNase_MRP RNase_MRP 118 0.94 - - 0.940 - - - - - -
56. msgn1 ENSDARG00000070546 188 0.94 - - 0.940 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
57. parp16 ENSDARG00000018593 873 0.94 - - 0.940 - - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
58. CMTM8 CMTM8 71 0.94 - - 0.940 - - - - - -
59. wdr66 ENSDARG00000059855 276 0.94 - - 0.940 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
60. zgc:158260 ENSDARG00000101703 103 0.94 - - 0.940 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
61. slc35c1 ENSDARG00000104669 65 0.94 - - 0.940 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
62. CR942805.1 CR942805.1 94 0.94 - - 0.940 - - - - - -
63. CABZ01113061.1 CABZ01113061.1 51 0.94 - - 0.940 - - - - - -
64. hsf1 ENSDARG00000008818 491 0.939 - - 0.939 - - - - - - heat shock transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-16]
65. mxra5b ENSDARG00000076309 190 0.939 - - 0.939 - - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
66. CU571255.1 CU571255.1 902 0.939 - - 0.939 - - - - - -
67. il2rb ENSDARG00000075720 116 0.939 - - 0.939 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
68. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.938 - - 0.938 - - - - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
69. ATF6B 960 0.938 - - 0.938 - - - - - - activating transcription factor 6 beta
70. SYDE2 ENSDARG00000099479 1891 0.938 - - 0.938 - - - - - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
71. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.938 - - 0.938 - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
72. map3k10 ENSDARG00000055672 284 0.938 - - 0.938 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
73. TRIM14_6 TRIM14_6 342 0.937 - - 0.937 - - - - - -
74. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.937 - - 0.937 - - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
75. GPSM3 GPSM3 257 0.937 - - 0.937 - - - - - -
76. rcbtb2 ENSDARG00000090687 1658 0.937 - - 0.937 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
77. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.936 - - 0.936 - - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
78. PLCE1 ENSDARG00000087921 277 0.936 - - 0.936 - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
79. inpp5e ENSDARG00000103926 567 0.936 - - 0.936 - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
80. ndst2b ENSDARG00000060678 453 0.935 - - 0.935 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
81. brf1a ENSDARG00000017835 206 0.935 - - 0.935 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
82. cables1 ENSDARG00000099395 361 0.935 - - 0.935 - - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
83. CAMSAP2 CAMSAP2 109 0.935 - - 0.935 - - - - - -
84. plcg1 ENSDARG00000038442 5324 0.934 - - 0.934 - - - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
85. sqrdl 1598 0.934 - - 0.934 - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
86. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.933 - - 0.933 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
87. rapgef1a ENSDARG00000043593 416 0.933 - - 0.933 - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
88. tfdp2 ENSDARG00000042835 1985 0.933 - - 0.933 - - - - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
89. FBLN1 ENSDARG00000103311 877 0.933 - - 0.933 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
90. CYP27A1_1 CYP27A1_1 329 0.932 - - 0.932 - - - - - -
91. asap2b ENSDARG00000019564 1660 0.932 - - 0.932 - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
92. twist2 ENSDARG00000078266 499 0.932 - - 0.932 - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
93. pho ENSDARG00000035133 670 0.932 - - 0.932 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
94. alg6 ENSDARG00000017617 483 0.931 - - 0.931 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
95. CABZ01073174.1 CABZ01073174.1 581 0.931 - - 0.931 - - - - - -
96. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.93 - - 0.930 - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
97. DACT3 DACT3 766 0.93 - - 0.930 - - - - - -
98. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 0.93 - - 0.930 - - - - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
99. lysmd3 ENSDARG00000024693 754 0.93 - - 0.930 - - - - - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
100. zgc:66484 ENSDARG00000030478 167 0.93 - - 0.930 - - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]

There are 889 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA