Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdf2

Gene Name Gene ID Reads Annotation
sdf2 ENSDARG00000024026 805 stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]










Genes with expression patterns similar to sdf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdf2 ENSDARG00000024026 805 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
2. RBMS1 RBMS1 258 1.711 - 0.906 - - - - 0.805 - -
3. cacng6a ENSDARG00000036457 344 1.703 - 0.916 - - - - 0.787 - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
4. pdf ENSDARG00000013950 293 1.701 - 0.882 - - - - 0.819 - - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
5. fosb ENSDARG00000055751 170 1.679 - 0.827 - - - - 0.852 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
6. CYSTM1 CYSTM1 176 1.643 - 0.885 - - - - - 0.758 -
7. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.637 - 0.887 - - - - 0.750 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
8. slc5a11 ENSDARG00000019932 160 1.62 - - - - - - 0.856 0.764 - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
9. stx5a ENSDARG00000025033, ENSDARG00000112598 380 1.61 - 0.910 - - - - - 0.700 - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
10. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.61 - 0.892 - - - - - 0.718 - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
11. hspa12a ENSDARG00000070603 1474 1.601 - 0.789 - - - - 0.812 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
12. BX005085.1 ENSDARG00000089947 230 1.6 - 0.877 - - - - - 0.723 -
13. babam1 ENSDARG00000077526 776 1.59 - 0.803 - - - - 0.787 - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
14. CABZ01054405.1 CABZ01054405.1 115 1.579 - - - - - - 0.841 0.738 -
15. EDEM3 ENSDARG00000074129 805 1.576 - 0.830 - - - - 0.746 - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
16. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.561 - 0.859 - - - - 0.702 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
17. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 1.546 - 0.704 - - - - 0.842 - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
18. mrps5 ENSDARG00000062209, ENSDARG00000114003 619 1.545 - - - - - 0.783 - 0.762 - mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]
19. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1.536 - - - - - - 0.760 0.776 - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
20. ubald1b ENSDARG00000020976 1162 1.526 - 0.806 - - - - - 0.720 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
21. zfr2 ENSDARG00000071683 780 1.522 - 0.810 - - - 0.712 - - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
22. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.494 0.721 0.773 - - - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
23. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.479 - 0.770 - - - 0.709 - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
24. stil ENSDARG00000024904, ENSDARG00000114288, ENSDARG00000116436 324 1.469 - - - - - - 0.704 0.765 - scl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
25. si:ch73-211l2.1 605 1.446 - - - - - - 0.742 0.704 - si:ch73-211l2.1
26. angel2 ENSDARG00000016743 322 1.445 - - - - - 0.726 0.719 - - angel homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6498]
27. ZDHHC20_1 ZDHHC20_1 440 1.438 - - - - - - 0.703 0.735 -
28. soul3 ENSDARG00000102257 939 0.959 - 0.959 - - - - - - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
29. pc pc 116 0.957 - 0.957 - - - - - - -
30. ATP5J 343 0.944 - 0.944 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
31. ormdl2 ENSDARG00000058022 1146 0.941 - 0.941 - - - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
32. rab33ba ENSDARG00000052290 914 0.941 - 0.941 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
33. cercam ENSDARG00000079049, ENSDARG00000109573 2228 0.94 - 0.940 - - - - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
34. pnpla2 ENSDARG00000089390 129 0.939 - 0.939 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
35. CU207301.4 CU207301.4 192 0.939 - - - - - - 0.939 - -
36. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 0.936 - 0.936 - - - - - - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
37. stk11 ENSDARG00000046074 506 0.933 - 0.933 - - - - - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
38. tspan5b ENSDARG00000070449 1056 0.931 - 0.931 - - - - - - - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
39. si:ch211-215d8.2 ENSDARG00000093233 784 0.93 - 0.930 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
40. CABZ01114089.1 CABZ01114089.1 127 0.929 - 0.929 - - - - - - -
41. KCNU1 KCNU1 246 0.929 - 0.929 - - - - - - -
42. plce1 ENSDARG00000087921 44 0.929 - 0.929 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
43. si:dkeyp-123a12.2 ENSDARG00000115029 78 0.928 - 0.928 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
44. zgc:109744 ENSDARG00000070800 262 0.927 - 0.927 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
45. tex261 ENSDARG00000044584 513 0.927 - 0.927 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
46. foxn4 ENSDARG00000010591 2332 0.927 - 0.927 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
47. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.926 - 0.926 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
48. lonp1 ENSDARG00000102765 507 0.926 - 0.926 - - - - - - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
49. grhl3 ENSDARG00000078552 897 0.926 - 0.926 - - - - - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
50. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.925 - 0.925 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
51. emilin1b ENSDARG00000026166 1530 0.925 - 0.925 - - - - - - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
52. timm23 timm23 2712 0.925 - 0.925 - - - - - - -
53. chordc1 chordc1 548 0.925 - 0.925 - - - - - - -
54. trmt1l ENSDARG00000042057 466 0.924 - 0.924 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
55. NUDT8 ENSDARG00000007722 329 0.924 - 0.924 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
56. unc13d ENSDARG00000078249 91 0.923 - 0.923 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
57. gpam ENSDARG00000074169 488 0.923 - 0.923 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
58. fam57ba ENSDARG00000026875 504 0.922 - 0.922 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
59. cd74a ENSDARG00000009087 20 0.922 - 0.922 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
60. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.921 - 0.921 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
61. ube3c ENSDARG00000035978, ENSDARG00000112229 787 0.921 - 0.921 - - - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
62. kcnk13a ENSDARG00000008212 136 0.921 - 0.921 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
63. sh3pxd2aa ENSDARG00000060148 913 0.921 - 0.921 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
64. acad11 ENSDARG00000045411 350 0.92 - 0.920 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
65. nipsnap1 ENSDARG00000005320 330 0.92 - 0.920 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
66. TEAD1 TEAD1 43 0.92 - 0.920 - - - - - - -
67. BX005256.1 ENSDARG00000106112 467 0.92 - 0.920 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
68. CR376783.1 ENSDARG00000074235 259 0.919 - 0.919 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
69. usp45 ENSDARG00000075013 227 0.919 - 0.919 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
70. syne2b ENSDARG00000053484 9225 0.919 - 0.919 - - - - - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
71. unc93a ENSDARG00000041554 427 0.918 - 0.918 - - - - - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
72. UBASH3B UBASH3B 292 0.918 - 0.918 - - - - - - -
73. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.917 - 0.917 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
74. hoxc6a ENSDARG00000070343 2839 0.916 - 0.916 - - - - - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
75. si:ch1073-155h21.1 ENSDARG00000007582 137 0.916 - 0.916 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
76. ankrd28b ENSDARG00000009023 960 0.916 - 0.916 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
77. CT573322.1 CT573322.1 38 0.916 - 0.916 - - - - - - -
78. slc25a11 ENSDARG00000035741 3377 0.915 - 0.915 - - - - - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
79. tbcelb ENSDARG00000019525 299 0.915 - 0.915 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
80. CR388047.3 ENSDARG00000117023 89 0.915 - 0.915 - - - - - - -
81. rangap1a ENSDARG00000041317 1456 0.915 - 0.915 - - - - - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
82. smdt1 smdt1 99 0.914 - 0.914 - - - - - - -
83. chek1 ENSDARG00000104765 1029 0.914 - 0.914 - - - - - - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
84. alg9 ENSDARG00000012840 631 0.913 - 0.913 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
85. btbd6a ENSDARG00000076440 748 0.913 - 0.913 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
86. commd3 ENSDARG00000045402 1601 0.913 - 0.913 - - - - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
87. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.913 - 0.913 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
88. slc48a1b ENSDARG00000026109 1427 0.913 - 0.913 - - - - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
89. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.912 - 0.912 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
90. dcun1d2 dcun1d2 1721 0.912 - 0.912 - - - - - - -
91. yaf2 ENSDARG00000015966 1905 0.911 - 0.911 - - - - - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
92. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.911 - 0.911 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
93. fam63b 484 0.911 - 0.911 - - - - - - - family with sequence similarity 63, member B
94. tmem150a tmem150a 543 0.91 - 0.910 - - - - - - -
95. TM2D2 ENSDARG00000035515 561 0.91 - 0.910 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
96. rnf34a ENSDARG00000038300 179 0.91 - 0.910 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
97. pgap2 ENSDARG00000044596 60 0.91 - 0.910 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
98. ppapdc2 ppapdc2 67 0.91 - 0.910 - - - - - - -
99. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 0.91 - 0.910 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
100. pcnx 689 0.91 - 0.910 - - - - - - - pecanex homolog (Drosophila), transcript variant X5

There are 954 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA