Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sde2

Gene Name Gene ID Reads Annotation
sde2 ENSDARG00000024124, ENSDARG00000109881 2342 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]










Genes with expression patterns similar to sde2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
2. fam129ba ENSDARG00000062970 1578 2.6 0.915 - - - 0.973 - - - 0.712 family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
3. golga7 ENSDARG00000057676 4691 2.535 0.821 - - 0.808 0.906 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
4. MDC1 ENSDARG00000086764 1851 2.437 - - - 0.727 0.972 - - - 0.738 mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
5. TCEB3 2429 2.344 - 0.709 0.899 - - - - 0.736 - transcription elongation factor B (SIII), polypeptide 3
6. cand1 ENSDARG00000017841 8164 2.305 - 0.779 - 0.717 - - 0.809 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
7. txnl1 ENSDARG00000011921 692 2.271 0.770 0.700 - 0.801 - - - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
8. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 2.265 0.716 0.828 - - - - - - 0.721 insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
9. brap ENSDARG00000008560 821 2.248 0.800 - - - - - - 0.744 0.704 BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
10. zgc:111974 zgc:111974 1386 1.838 0.878 - - - 0.960 - - - -
11. scrt2 ENSDARG00000056175 4331 1.821 - - 0.887 - 0.934 - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
12. rybpa ENSDARG00000037773 904 1.811 - - - 0.840 0.971 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
13. aldh18a1 ENSDARG00000099579 2185 1.805 - - - - 0.959 - - 0.846 - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
14. zcchc17 ENSDARG00000018936 1577 1.801 - - - 0.843 0.958 - - - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
15. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.772 - 0.780 0.992 - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
16. dhx9 ENSDARG00000079725 1241 1.77 - - - 0.804 0.966 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
17. ube2e2 ENSDARG00000034670 5918 1.768 - - 0.971 0.797 - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
18. cry2a cry2a 2728 1.765 0.871 - 0.894 - - - - - -
19. eif2d ENSDARG00000012929 2624 1.765 - - - - 0.960 - - 0.805 - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
20. cdan1 ENSDARG00000042261 658 1.76 - - - 0.786 0.974 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
21. myo9al1 myo9al1 1194 1.756 - - - - 0.972 - - 0.784 -
22. ZBTB41 ENSDARG00000054984 464 1.746 - - 0.905 - - - - - 0.841 zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
23. cnn3b ENSDARG00000029856 4807 1.741 - - - - 0.975 - 0.766 - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
24. rbm17 ENSDARG00000031346 2079 1.741 - 0.779 - - 0.962 - - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
25. foxo3b ENSDARG00000042904 5046 1.738 - - 0.878 - 0.860 - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
26. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.725 0.824 - 0.901 - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
27. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.716 - - 0.940 0.776 - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
28. nol12 ENSDARG00000038027 2288 1.716 - - 0.902 - - - - 0.814 - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
29. unc5b ENSDARG00000033327 3432 1.713 - 0.757 - - 0.956 - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
30. lrrfip2 ENSDARG00000010400 2633 1.706 - - - 0.734 0.972 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
31. paip2b ENSDARG00000008706 4255 1.699 0.916 - - - - - 0.783 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
32. usf2 ENSDARG00000020228 2667 1.699 0.724 - - - 0.975 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
33. tdg tdg 3269 1.697 - - - 0.755 0.942 - - - -
34. gpr98 gpr98 717 1.697 - - - 0.727 0.970 - - - -
35. rtfdc1 1792 1.691 - - - - 0.966 - 0.725 - - replication termination factor 2 domain containing 1, transcript variant X2
36. SIK1 ENSDARG00000058606 1982 1.689 - 0.790 0.899 - - - - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
37. zgc:77262 ENSDARG00000044545 5563 1.689 - - - - 0.899 - 0.790 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
38. C6H6orf106 C6H6orf106 2940 1.688 0.856 - - 0.832 - - - - -
39. usp49 ENSDARG00000000229 706 1.686 0.824 - - 0.862 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
40. CASKIN2_1 CASKIN2_1 2299 1.68 0.708 - - - 0.972 - - - -
41. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.68 - 0.735 - - 0.945 - - - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
42. PRRG1 ENSDARG00000043283 2779 1.679 - - - - 0.952 - 0.727 - - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
43. zgc:161969 ENSDARG00000041359 898 1.672 - - - - 0.959 - - - 0.713 zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
44. mier1a ENSDARG00000041072 1690 1.668 - - - 0.713 0.955 - - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
45. rbl1 ENSDARG00000008141 1217 1.667 0.765 - 0.902 - - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
46. CNOT2 ENSDARG00000061802 1500 1.667 - - - - 0.954 - - 0.713 - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
47. kmt2bb ENSDARG00000060697 5230 1.664 - - - 0.799 0.865 - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
48. MYO1D ENSDARG00000036863 768 1.663 - - 0.904 - - - - - 0.759 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
49. rcn1 ENSDARG00000070006 8455 1.662 - - - - 0.940 - - - 0.722 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
50. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.662 - - - 0.743 0.919 - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
51. mapre1b ENSDARG00000002659 9119 1.661 - - 0.843 - 0.818 - - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
52. brip1 ENSDARG00000074410, ENSDARG00000113993 501 1.66 - - 0.905 0.755 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
53. lmnb2 ENSDARG00000101624 11304 1.659 - - 0.764 - 0.895 - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
54. sdc2 ENSDARG00000002731 6607 1.656 0.786 - - - 0.870 - - - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
55. hgs ENSDARG00000020960 3574 1.654 - 0.705 - - 0.949 - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
56. fam89a ENSDARG00000079979 4375 1.654 0.850 0.804 - - - - - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
57. NDUFB2 ENSDARG00000045490 9141 1.647 - - 0.878 - - 0.769 - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
58. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.644 - - 0.856 0.788 - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
59. creb1a ENSDARG00000053586 5068 1.643 - - 0.881 - - - 0.762 - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
60. ezh2 ENSDARG00000010571 3273 1.639 - - - - 0.915 - 0.724 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
61. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.638 0.899 - - - - - - - 0.739 ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
62. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.636 - - - 0.878 - - 0.758 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
63. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.636 - 0.816 - - - 0.820 - - - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
64. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.63 - - 0.839 0.791 - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
65. asna1 ENSDARG00000018190 5253 1.629 - - 0.886 - - - - - 0.743 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
66. CABIN1 ENSDARG00000079326 905 1.624 - - - 0.805 - - - - 0.819 calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
67. C11H12orf10 C11H12orf10 1305 1.622 0.722 - 0.900 - - - - - -
68. flot2a ENSDARG00000004830 5276 1.62 - - - - 0.910 - 0.710 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
69. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.614 - - - 0.809 - - - - 0.805 immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
70. syf2 ENSDARG00000004706 2463 1.611 - 0.848 - - - - 0.763 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
71. cmtm6 ENSDARG00000099631 641 1.61 0.789 - - 0.821 - - - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
72. tmeff1b ENSDARG00000056740 11253 1.609 - - 0.888 0.721 - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
73. CPAMD8 ENSDARG00000056530 3481 1.607 0.879 - - - - 0.728 - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
74. acsbg2 ENSDARG00000004094 2445 1.605 - - - 0.772 - - - 0.833 - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
75. RPS6KC1 ENSDARG00000104103 746 1.604 - 0.806 - - - 0.798 - - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
76. C8H22orf39 C8H22orf39 1236 1.592 - - - - - 0.808 - - 0.784
77. prpf40a ENSDARG00000058467 6565 1.591 - - - - 0.879 - 0.712 - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
78. ppig ENSDARG00000044431 3427 1.59 - 0.778 - 0.812 - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
79. fbxw4 ENSDARG00000033551 645 1.588 - - - - - - - 0.753 0.835 F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
80. chd8 ENSDARG00000075543, ENSDARG00000111419 663 1.588 - - - - - 0.871 - - 0.717 chromodomain helicase DNA binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6320]
81. hsd17b7 ENSDARG00000088140 185 1.584 - - - - - - - 0.814 0.770 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
82. cldnf ENSDARG00000043133 1006 1.582 0.807 - - - - - - 0.775 - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
83. GABARAP GABARAP 8341 1.58 - 0.744 - - 0.836 - - - -
84. rprd2b ENSDARG00000074676 809 1.579 - - - 0.843 - - - - 0.736 regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
85. CR318593.1 CR318593.1 290 1.579 - - - - - - - 0.754 0.825
86. SPAG5 SPAG5 1117 1.577 0.822 - - - - - - - 0.755
87. tjp3 ENSDARG00000002909 1978 1.572 0.768 - 0.804 - - - - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
88. flrt3 ENSDARG00000076895 3516 1.572 - - - - 0.839 - - - 0.733 fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
89. CBFA2T3 ENSDARG00000079012 6799 1.572 0.787 - - - 0.785 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
90. zgc:110626 ENSDARG00000053159 1124 1.571 0.828 0.743 - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
91. pias4a ENSDARG00000007081 4264 1.569 - - 0.859 - - - - 0.710 - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
92. tlk1a ENSDARG00000042467 2339 1.568 - - 0.783 0.785 - - - - - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
93. ZFYVE1 ENSDARG00000078652 631 1.567 - - - - - - - 0.825 0.742 zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
94. terfa ENSDARG00000039302 779 1.562 0.816 - - - - - - 0.746 - telomeric repeat binding factor a [Source:ZFIN;Acc:ZDB-GENE-020419-38]
95. trrap ENSDARG00000100623 3429 1.562 - 0.820 - - - - - - 0.742 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
96. sp8a ENSDARG00000011870 1075 1.561 0.796 - - - - - - 0.765 - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
97. gpm6bb ENSDARG00000001676 2005 1.557 - - - 0.849 - - 0.708 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
98. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.554 - - - 0.831 - - 0.723 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
99. lzic ENSDARG00000055899 638 1.554 0.818 - - 0.736 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
100. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.553 - 0.813 - - - - 0.740 - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]

There are 1916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA