Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sdcbp2

Gene Name Gene ID Reads Annotation
sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]










Genes with expression patterns similar to sdcbp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
2. entpd1 ENSDARG00000045066 2930 2.57 - 0.992 - - - 0.740 0.838 - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
3. eif3ha ENSDARG00000102452 9238 2.534 - - - 0.975 - 0.746 0.813 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
4. napa napa 4444 2.524 - - - 0.990 - 0.744 0.790 - -
5. sumo3a ENSDARG00000028119 13447 2.524 - 0.989 - - - 0.744 0.791 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
6. mllt10 ENSDARG00000045401 7557 2.481 - - - 0.980 - 0.735 0.766 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
7. khsrp ENSDARG00000026489 15738 2.469 - 0.992 - - - 0.767 0.710 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
8. tax1bp1b ENSDARG00000056856 4526 2.283 - 0.782 - - - 0.735 0.766 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
9. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 2.26 - - 0.700 - - 0.756 0.804 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
10. vdac1 ENSDARG00000045132 8051 2.254 - - - 0.821 - 0.715 0.718 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. tcf7l1b ENSDARG00000007369 2785 2.239 - - - 0.769 - 0.756 0.714 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
12. pbx2 ENSDARG00000019717 6892 1.851 - 0.997 - - - - 0.854 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
13. ebag9 ENSDARG00000040021 2217 1.818 - 0.987 - - - 0.831 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
14. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.805 - - - 0.978 - - 0.827 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
15. pip5k2 pip5k2 5743 1.794 - 0.993 - - - - 0.801 - -
16. hadhb ENSDARG00000102055 9700 1.786 - - - 0.970 - - 0.816 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
17. nutf2l ENSDARG00000014499 3927 1.771 - 0.990 - - - - 0.781 - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
18. gpx4b ENSDARG00000076836 8085 1.771 - - - 0.972 - - 0.799 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
19. stmn1a ENSDARG00000004169 21169 1.768 - - - 0.948 - - 0.820 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
20. nucks1b ENSDARG00000012777 4468 1.766 - - - 0.987 - - 0.779 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
21. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.765 - 0.994 - - - - 0.771 - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
22. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.763 - 0.943 - - - 0.820 - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
23. pum1 ENSDARG00000099256 5017 1.76 - - - - - 0.879 0.881 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
24. tuba8l3 ENSDARG00000070155 7525 1.755 - 0.989 - - - 0.766 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
25. ARFGAP1 ENSDARG00000101616 2952 1.755 - - - 0.987 - - 0.768 - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
26. lsm14ab ENSDARG00000100553 3837 1.755 - - - 0.982 - - 0.773 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
27. angptl4 ENSDARG00000035859 2701 1.735 - - - 0.987 - - 0.748 - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
28. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.734 - 0.988 - - - - 0.746 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
29. prmt1 ENSDARG00000010246 11311 1.733 - - - 0.893 - - 0.840 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
30. Sep-02 Sep-02 10074 1.73 - - - - - 0.852 0.878 - -
31. serinc5 ENSDARG00000008153 2863 1.721 - 0.992 - - - - - 0.729 - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
32. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.719 - 0.949 - - - - 0.770 - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
33. cox6c ENSDARG00000038577 16845 1.717 - - - 0.922 - - 0.795 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
34. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.716 - - - 0.986 - - 0.730 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
35. taf10 ENSDARG00000068641 3333 1.716 - - - 0.992 - - 0.724 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
36. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.716 - - - 0.977 - - 0.739 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
37. lmnb1 ENSDARG00000044299 9817 1.716 - - - 0.959 - - 0.757 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
38. rac1 rac1 7341 1.715 - - - - - 0.880 0.835 - -
39. wu:fb17g07 wu:fb17g07 10567 1.714 - - - 0.985 - - 0.729 - -
40. elavl1 11672 1.711 - - - 0.961 - 0.750 - - - ELAV like RNA binding protein 1, transcript variant X3
41. syf2 ENSDARG00000004706 2463 1.71 - - - 0.987 - - 0.723 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
42. ddx19 ENSDARG00000005699 4602 1.709 - 0.989 - - - 0.720 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
43. aurkb ENSDARG00000037640 4874 1.709 - 0.994 - - - 0.715 - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
44. vimp 4034 1.702 - - - 0.981 - - 0.721 - - VCP-interacting membrane selenoprotein
45. mcrs1 ENSDARG00000020840 3232 1.701 - 0.986 - - - - 0.715 - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
46. swi5 ENSDARG00000078492 1299 1.699 - 0.991 - - - - 0.708 - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
47. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.692 - 0.982 - - - - 0.710 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
48. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.69 - 0.917 - - - - 0.773 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
49. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.689 - - - - - 0.820 0.869 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
50. SH3BGRL ENSDARG00000058302 4525 1.687 - - - 0.982 - - - 0.705 - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
51. pdcd4a ENSDARG00000021702 7293 1.682 - - - 0.973 - - 0.709 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
52. hif1al ENSDARG00000100826 18627 1.673 - - - 0.972 - - 0.701 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
53. atpif1b 8625 1.667 - - - - - 0.851 0.816 - - ATPase inhibitory factor 1b
54. hp1bp3 ENSDARG00000044669 23708 1.665 - - - 0.924 - 0.741 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
55. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.659 - - - - - - 0.804 - 0.855 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
56. psma4 ENSDARG00000045928 5112 1.659 - - - - - 0.857 0.802 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
57. akirin2 ENSDARG00000058729 13245 1.655 - - - - - 0.817 0.838 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
58. eif4h ENSDARG00000042252 6742 1.642 - - - - - 0.875 0.767 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
59. ppap2b ppap2b 2900 1.636 - - - - - - 0.769 - 0.867
60. rerea ENSDARG00000077353 4162 1.634 - - - - - 0.851 0.783 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
61. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.618 - - - 0.834 - - 0.784 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
62. GABARAP GABARAP 8341 1.616 - - - - - 0.718 0.898 - -
63. cpsf3 ENSDARG00000027649 6897 1.616 - - - - - 0.824 0.792 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
64. golga7 ENSDARG00000057676 4691 1.609 - - - - - 0.845 0.764 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
65. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.604 - - - - - 0.851 0.753 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
66. sdha ENSDARG00000016721 8255 1.602 - 0.850 - - - - 0.752 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
67. acap3a ENSDARG00000075990 9652 1.6 - - - - - 0.775 0.825 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
68. snrpf ENSDARG00000105037 10241 1.59 - - - - - 0.807 0.783 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
69. h1f0 ENSDARG00000038559 39781 1.59 - - - 0.792 - 0.798 - - - H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
70. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.589 - - - - - 0.807 0.782 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
71. ndrg3a ENSDARG00000013087 5581 1.588 - - - - - 0.791 0.797 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
72. acadm ENSDARG00000038900 2319 1.588 - - - - - 0.762 0.826 - - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
73. SERBP1 SERBP1 9276 1.586 - - - - - 0.796 0.790 - -
74. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.586 - - - - - 0.750 0.836 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
75. sf1 ENSDARG00000008188 5142 1.586 - - - - - 0.835 0.751 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
76. slc25a11 ENSDARG00000035741 3377 1.584 - - - - - 0.766 0.818 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
77. psmb4 ENSDARG00000054696 8100 1.584 - - - - - - 0.726 - 0.858 proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
78. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.584 - - - - - 0.824 0.760 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
79. zgc:193541 ENSDARG00000092873 21276 1.582 - - - - - 0.808 0.774 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
80. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.581 - - - - - 0.837 0.744 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
81. celf1 ENSDARG00000005315 5598 1.579 - - - - - 0.792 0.787 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
82. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.578 - - - - - - 0.772 - 0.806 staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
83. blcap ENSDARG00000052073 8646 1.57 - - - - - 0.789 0.781 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
84. hmga2 ENSDARG00000069912 20402 1.568 - - - - - 0.768 0.800 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
85. plcg1 ENSDARG00000038442 5324 1.565 - - - - - 0.794 0.771 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
86. prkab1b ENSDARG00000046143 8640 1.564 - 0.808 - - - - 0.756 - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
87. nnt ENSDARG00000023536 7357 1.563 - - - - - 0.712 0.851 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
88. h2afy2_1 ENSDARG00000087897 9887 1.561 - - - - - 0.742 0.819 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
89. nucks1a ENSDARG00000078473 28285 1.56 - - - 0.841 - 0.719 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
90. lyrm4 ENSDARG00000078352 2245 1.56 - - - - - 0.782 0.778 - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
91. faua ENSDARG00000099022 82901 1.558 - - - 0.800 - - 0.758 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
92. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.557 - - - - - 0.735 0.822 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
93. zgc:91910 ENSDARG00000035678 6172 1.555 - - 0.731 - - - 0.824 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
94. sec61b ENSDARG00000076568 11859 1.548 - - - 0.825 - - - - 0.723 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
95. rap2c ENSDARG00000015649 4709 1.546 - - - - - 0.742 0.804 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
96. atp5e 14858 1.541 - - - - - 0.766 0.775 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
97. ptenb ENSDARG00000056623 5783 1.541 - - - - - 0.775 0.766 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
98. tp53bp2 tp53bp2 1969 1.539 - - - - - 0.731 0.808 - -
99. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.538 - - - - - 0.792 0.746 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
100. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.534 - 0.783 - - - - 0.751 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]

There are 1256 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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