Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scxa

Gene Name Gene ID Reads Annotation
scxa ENSDARG00000035695 255 scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]










Genes with expression patterns similar to scxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scxa ENSDARG00000035695 255 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
2. CR847543.1 ENSDARG00000086708 155 2.489 1.000 - - 0.736 - - - 0.753 -
3. si:dkey-21n8.3 si:dkey-21n8.3 5 1.829 1.000 - 0.829 - - - - - -
4. si:dkey-217m5.3 si:dkey-217m5.3 22 1.822 1.000 - 0.822 - - - - - -
5. cx45.6 cx45.6 26 1.813 1.000 - - - - - 0.813 - -
6. si:ch211-13o20.1 si:ch211-13o20.1 30 1.809 1.000 - 0.809 - - - - - -
7. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.79 1.000 - - 0.790 - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
8. ano2 ENSDARG00000101363 50 1.769 1.000 - 0.769 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
9. HIST1H4J_4 HIST1H4J_4 9 1.761 1.000 - 0.761 - - - - - -
10. mettl21a ENSDARG00000012051 86 1.748 1.000 - - - - - 0.748 - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
11. si:dkey-117p18.2 si:dkey-117p18.2 104 1.727 1.000 - - - - - 0.727 - -
12. FP565458.1 FP565458.1 61 1.727 1.000 - - - - - 0.727 - -
13. scpp8 ENSDARG00000093124 54 1.613 - - - - - - 0.866 0.747 - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
14. BX957297.2 ENSDARG00000105608 194 1.591 - - - - - - 0.845 0.746 -
15. btk ENSDARG00000004433 106 1.571 - - - 0.805 - - 0.766 - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
16. si:dkey-51d8.9 ENSDARG00000096217 47 1.561 - - 0.737 - - - 0.824 - - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
17. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.557 - - - - - 0.819 0.738 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
18. ZNF365 ENSDARG00000087985 28 1.541 - - 0.728 - - - 0.813 - - zinc finger protein 365 [Source:ZFIN;Acc:ZDB-GENE-131121-260]
19. LAYN LAYN 94 1.529 - - - - - 0.703 0.826 - -
20. si:ch211-93g23.2 ENSDARG00000070558 105 1.529 0.705 - - 0.824 - - - - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
21. si:ch211-241j12.3 ENSDARG00000043963 128 1.526 - - - 0.781 - 0.745 - - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
22. mpp6a ENSDARG00000056892 324 1.492 - - - - - 0.703 0.789 - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
23. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
24. FAM196B FAM196B 1 1 1.000 - - - - - - - -
25. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
26. CCDC18 ENSDARG00000078822 5 1 1.000 - - - - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
27. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 1.000 - - - - - - - -
28. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
29. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
30. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
31. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
32. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
33. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
34. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
35. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
36. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
37. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
38. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
39. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
40. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1 1.000 - - - - - - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
41. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
42. myo15aa ENSDARG00000075292 29 1 1.000 - - - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
43. si:ch73-111m19.2 ENSDARG00000003077 43 1 1.000 - - - - - - - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
44. CABZ01070852.2 ENSDARG00000114999 16 1 1.000 - - - - - - - -
45. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
46. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
47. PEG3_21 PEG3_21 2 1 1.000 - - - - - - - -
48. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
49. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
50. adck3 83 1 1.000 - - - - - - - - aarF domain containing kinase 3
51. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
52. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
53. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
54. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
55. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
56. si:ch211-210h11.7 si:ch211-210h11.7 32 1 1.000 - - - - - - - -
57. BX323064.1 ENSDARG00000099914 11 1 1.000 - - - - - - - -
58. sez6a ENSDARG00000100876 35 1 1.000 - - - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
59. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
60. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
61. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
62. rftn1a ENSDARG00000070831 5 1 1.000 - - - - - - - - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
63. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
64. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
65. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
66. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
67. klf6b ENSDARG00000038561 27 1 1.000 - - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
68. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
69. CNTD1 2 1 1.000 - - - - - - - - cyclin N-terminal domain containing 1
70. cyp4f3 ENSDARG00000053530 10 1 1.000 - - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
71. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
72. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
73. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
74. zgc:154055 ENSDARG00000103924 452 1 1.000 - - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
75. AL807829.1 AL807829.1 2 1 1.000 - - - - - - - -
76. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
77. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
78. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
79. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
80. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
81. irgq2 ENSDARG00000068657 4 1 1.000 - - - - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
82. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
83. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
84. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
85. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
86. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
87. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
88. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
89. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
90. abhd10a ENSDARG00000076435 3 1 1.000 - - - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
91. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
92. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
93. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
94. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
95. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
96. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
97. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
98. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
99. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
100. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]

There are 867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA