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Results for scube3

Gene Name Gene ID Reads Annotation
scube3 ENSDARG00000011490 227 signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]










Genes with expression patterns similar to scube3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scube3 ENSDARG00000011490 227 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
2. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 2.55 0.843 0.801 - - - - 0.906 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
3. rs1 rs1 70 1.826 0.843 - - 0.983 - - - - -
4. cep76 ENSDARG00000058319 143 1.808 - - 0.821 0.987 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
5. zgc:113364 ENSDARG00000037192 339 1.758 - - - 0.902 - - 0.856 - - zgc:113364 [Source:ZFIN;Acc:ZDB-GENE-050410-5]
6. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1.749 0.843 - - - - - 0.906 - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
7. esm1 ENSDARG00000104370 186 1.738 0.865 - - - - - 0.873 - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
8. phf10 ENSDARG00000070084 1210 1.728 - 0.776 - 0.952 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
9. galnt14 ENSDARG00000023448 102 1.713 - - 0.730 0.983 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
10. rnf220a ENSDARG00000060929 693 1.71 - - - 0.905 - 0.805 - - - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
11. DIP2C DIP2C 222 1.707 - 0.727 - 0.980 - - - - -
12. ulk3 ENSDARG00000101661 69 1.705 - 0.717 - 0.988 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
13. sfi1 ENSDARG00000053992 1075 1.661 0.707 - - 0.954 - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
14. C4H12orf55 C4H12orf55 14 1.644 - 0.746 - - - - 0.898 - -
15. SNCAIP ENSDARG00000100198 522 1.622 - - 0.741 0.881 - - - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
16. C20H1orf95 C20H1orf95 12 1.615 - 0.717 - - - - 0.898 - -
17. runx2b ENSDARG00000059233 106 1.615 - 0.717 - - - - 0.898 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
18. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.588 - 0.785 - 0.803 - - - - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
19. abhd5a 130 1.583 - 0.879 - - - - 0.704 - - abhydrolase domain containing 5a, transcript variant X1
20. METTL4 ENSDARG00000088999 160 1.582 - 0.842 0.740 - - - - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
21. mfap1 ENSDARG00000018241 833 1.573 - - 0.737 0.836 - - - - - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
22. CABZ01054394.3 CABZ01054394.3 60 1.567 0.843 - - - - - 0.724 - -
23. smad6b ENSDARG00000031763 12 1.56 0.843 0.717 - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
24. DHRS7C DHRS7C 363 1.527 - - - 0.799 - - 0.728 - -
25. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.511 0.708 - 0.803 - - - - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
26. zgc:114037_4 57 1.477 - 0.754 - - - - 0.723 - - zgc:114037
27. sdcbp ENSDARG00000030097 196 1.43 - 0.725 0.705 - - - - - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
28. nr4a2b ENSDARG00000044532 103 0.99 - - - 0.990 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
29. si:dkey-283b15.3 si:dkey-283b15.3 81 0.989 - - - 0.989 - - - - -
30. tmem104 ENSDARG00000088560 859 0.989 - - - 0.989 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
31. ZCCHC2 ENSDARG00000067950 204 0.989 - - - 0.989 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
32. tuba7l ENSDARG00000104643 33 0.989 - - - 0.989 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
33. ptk6b ENSDARG00000059956 44 0.989 - - - 0.989 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
34. HTRA4 ENSDARG00000005943 77 0.988 - - - 0.988 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
35. wasb ENSDARG00000026350 139 0.988 - - - 0.988 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
36. CU639413.2 CU639413.2 33 0.988 - - - 0.988 - - - - -
37. ADCY3 ADCY3 537 0.988 - - - 0.988 - - - - -
38. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.988 - - - 0.988 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
39. TP53BP2 TP53BP2 217 0.988 - - - 0.988 - - - - -
40. si:ch1073-127d16.1 ENSDARG00000087674 105 0.988 - - - 0.988 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
41. ppfia2 ENSDARG00000013000 45 0.988 - - - 0.988 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
42. SYNGAP1_1 SYNGAP1_1 66 0.988 - - - 0.988 - - - - -
43. gnav1 ENSDARG00000043006 305 0.988 - - - 0.988 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
44. rxrba ENSDARG00000078954 85 0.987 - - - 0.987 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
45. TTC17 ENSDARG00000044812 124 0.987 - - - 0.987 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
46. dpf2 ENSDARG00000012219 666 0.987 - - - 0.987 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
47. zgc:165525 zgc:165525 207 0.987 - - - 0.987 - - - - -
48. pomcb ENSDARG00000069307 72 0.987 - - - 0.987 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
49. ftr65 202 0.986 - - - 0.986 - - - - - finTRIM family, member 65
50. si:dkey-100n10.2 101 0.986 - - - 0.986 - - - - - si:dkey-100n10.2
51. aanat2 ENSDARG00000079802 175 0.986 - - - 0.986 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
52. JMJD1C JMJD1C 289 0.986 - - - 0.986 - - - - -
53. slc3a1 ENSDARG00000017165 136 0.986 - - - 0.986 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
54. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.986 - - - 0.986 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
55. BX000999.4_1 BX000999.4_1 222 0.985 - - - 0.985 - - - - -
56. eef1a1a ENSDARG00000039502 234 0.985 - - - 0.985 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
57. gng2_1 ENSDARG00000056831 113 0.984 - - - 0.984 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
58. znf710a ENSDARG00000014680 582 0.984 - - - 0.984 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
59. PARP12 PARP12 77 0.984 - - - 0.984 - - - - -
60. zgc:165515 ENSDARG00000116300 182 0.984 - - - 0.984 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
61. acp6 ENSDARG00000040064 197 0.983 - - - 0.983 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
62. NHSL1 NHSL1 182 0.983 - - - 0.983 - - - - -
63. rexo1 ENSDARG00000026986 770 0.983 - - - 0.983 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
64. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 0.982 - - - 0.982 - - - - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
65. lhx9 ENSDARG00000056979 249 0.982 - - - 0.982 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
66. SHISA9 SHISA9 154 0.982 - - - 0.982 - - - - -
67. DTX3 DTX3 303 0.982 - - - 0.982 - - - - -
68. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.981 - - - 0.981 - - - - -
69. fam49a ENSDARG00000006672 939 0.981 - - - 0.981 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
70. znhit2 ENSDARG00000030805 197 0.981 - - - 0.981 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
71. si:ch211-59m15.1 87 0.981 - - - 0.981 - - - - - si:ch211-59m15.1
72. CABZ01029822.1 ENSDARG00000086931 1654 0.98 - - - 0.980 - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
73. GPR180 73 0.98 - - - 0.980 - - - - - G protein-coupled receptor 180, transcript variant X2
74. TTF1_5 TTF1_5 705 0.98 - - - 0.980 - - - - -
75. tdrd3 ENSDARG00000025421 633 0.979 - - - 0.979 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
76. far1 ENSDARG00000006899 204 0.979 - - - 0.979 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
77. fam151b ENSDARG00000020024 255 0.979 - - - 0.979 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
78. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.979 - - - 0.979 - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
79. CDKN1C CDKN1C 667 0.978 - - - 0.978 - - - - -
80. mctp2a ENSDARG00000001414 307 0.978 - - - 0.978 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
81. CABZ01051991.1 CABZ01051991.1 346 0.977 - - - 0.977 - - - - -
82. taf1b ENSDARG00000028937 879 0.977 - - - 0.977 - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
83. tuba4l ENSDARG00000074289 101 0.977 - - - 0.977 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
84. TSHZ3 TSHZ3 369 0.976 - - - 0.976 - - - - -
85. trmt2b ENSDARG00000033967 127 0.976 - - - 0.976 - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
86. supt20 ENSDARG00000078658 713 0.975 - - - 0.975 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
87. hes2.2 ENSDARG00000068168 197 0.975 - - - 0.975 - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
88. PARD3B PARD3B 401 0.974 - - - 0.974 - - - - -
89. CU683901.1 CU683901.1 187 0.974 - - - 0.974 - - - - -
90. DHX36 ENSDARG00000101059 314 0.974 - - - 0.974 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
91. GPN1 ENSDARG00000043928 566 0.972 - - - 0.972 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
92. slc5a3b ENSDARG00000077812 153 0.972 - - - 0.972 - - - - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
93. rims2a ENSDARG00000101606 1088 0.972 - - - 0.972 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
94. slc6a14 ENSDARG00000029866 61 0.971 - - - 0.971 - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
95. si:dkey-219c3.2 ENSDARG00000075805 619 0.971 - - - 0.971 - - - - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
96. rapgef5a ENSDARG00000075271 282 0.971 - - - 0.971 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
97. nck2b ENSDARG00000043361 908 0.969 - - - 0.969 - - - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
98. lmo1 ENSDARG00000034504 260 0.969 - - - 0.969 - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
99. SPTBN4_1 ENSDARG00000092624 473 0.969 - - - 0.969 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
100. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 0.969 - - - 0.969 - - - - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]

There are 1280 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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