Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scube2

Gene Name Gene ID Reads Annotation
scube2 ENSDARG00000037362 2833 signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]










Genes with expression patterns similar to scube2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scube2 ENSDARG00000037362 2833 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
2. UBE2QL1 ENSDARG00000079276 3474 3.525 0.947 - - - 0.950 0.847 0.781 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
3. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.369 0.846 - - - 0.939 0.870 0.714 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
4. TUBB8P7_1 TUBB8P7_1 2722 3.315 0.824 - - - 0.944 0.838 0.709 - -
5. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.246 0.776 0.989 - - - 0.745 0.736 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
6. msi1 ENSDARG00000010710 2634 3.242 0.755 - - - 0.869 0.833 0.785 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
7. atp6v0cb ENSDARG00000036577 3472 3.217 0.757 - - - 0.909 0.803 0.748 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
8. tmem35 ENSDARG00000052567 5685 3.157 0.840 - - - 0.711 0.816 0.790 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
9. pcdh1gc5 ENSDARG00000104826 10052 3.064 0.801 - 0.732 - - 0.775 0.756 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
10. hccs hccs 1758 2.66 0.739 0.987 - - 0.934 - - - -
11. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 2.598 - 0.991 - - - 0.833 0.774 - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
12. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 2.581 - 0.973 - - 0.877 - 0.731 - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
13. nefma ENSDARG00000021351 790 2.56 0.873 - - - 0.929 0.758 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
14. cspg5a ENSDARG00000069981 1699 2.549 0.928 - - - - 0.908 0.713 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
15. negr1 ENSDARG00000021607 1051 2.548 0.943 - - - - 0.874 0.731 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
16. SPOCK1 ENSDARG00000074644 794 2.533 0.858 - - - - 0.946 0.729 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
17. bhlhe22 ENSDARG00000058039 1673 2.533 0.920 - - - - 0.862 0.751 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
18. csf1b ENSDARG00000068263 248 2.517 0.908 - - - - 0.863 0.746 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
19. gng3 ENSDARG00000009553 2530 2.511 0.861 - - - - 0.901 0.749 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
20. gap43 ENSDARG00000099744 4114 2.509 0.884 - - - - 0.810 0.815 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
21. slc8a2b ENSDARG00000100592 598 2.507 0.863 - - - - 0.921 0.723 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
22. dnajc5aa ENSDARG00000042948 2885 2.501 0.815 - - - - 0.926 0.760 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
23. AGO1 ENSDARG00000092644 4521 2.5 0.897 - - - - 0.903 0.700 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
24. lgi1a ENSDARG00000020493 1218 2.498 0.721 - - - 0.942 0.835 - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
25. olfm2a ENSDARG00000077847 230 2.496 - 0.991 - - - 0.770 0.735 - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
26. calm1a ENSDARG00000021811 4791 2.491 - - - - 0.854 0.867 0.770 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
27. C8H1orf106 C8H1orf106 2690 2.477 0.886 - - - - 0.883 0.708 - -
28. dpysl3 ENSDARG00000002587 4381 2.477 0.827 - - - - 0.904 0.746 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
29. tuba1c ENSDARG00000055216 8384 2.477 0.863 - - - - 0.844 0.770 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
30. dbx2 2971 2.468 0.861 - - - - 0.898 0.709 - - developing brain homeobox 2
31. ckbb ENSDARG00000043257 3503 2.465 0.838 - - - - 0.880 0.747 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
32. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.456 0.866 - - - - 0.862 0.728 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
33. rbfox3 rbfox3 1443 2.442 0.816 - - - - 0.920 0.706 - -
34. cadpsb ENSDARG00000070567 458 2.44 0.804 - - - - 0.869 0.767 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
35. nbeaa ENSDARG00000070080 862 2.437 0.854 - - - - 0.837 0.746 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
36. slc1a3a ENSDARG00000104431 9888 2.435 0.872 - - - - 0.836 0.727 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
37. slc35g2b ENSDARG00000045447 378 2.434 0.796 - - - - 0.869 0.769 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
38. syngr3a ENSDARG00000014871 405 2.434 0.833 - - - - 0.898 0.703 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
39. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.432 0.853 - - - 0.822 - 0.757 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
40. nrarpb ENSDARG00000018958 6225 2.429 - - - - 0.864 0.820 0.745 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
41. ENDOD1_5 ENDOD1_5 8723 2.423 0.865 - 0.739 - - 0.819 - - -
42. kcnc3a ENSDARG00000055855 1821 2.422 0.822 - - - - 0.869 0.731 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
43. nova2 ENSDARG00000017673 7685 2.421 0.813 - - - - 0.891 0.717 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
44. CABZ01111990.1 CABZ01111990.1 4374 2.418 0.744 - - - - 0.917 0.757 - -
45. adcyap1b ENSDARG00000027740 1539 2.417 0.836 - - - - 0.816 0.765 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
46. gfap ENSDARG00000025301 5584 2.409 0.875 - - - - 0.793 0.741 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
47. mllt11 ENSDARG00000071026 2518 2.408 0.828 - - - - 0.810 0.770 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
48. hmgb3a ENSDARG00000056725 15668 2.408 0.848 - - - - 0.799 0.761 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
49. SYT2 ENSDARG00000014169 265 2.408 0.846 - - - - 0.843 0.719 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
50. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.405 0.864 - - - - 0.776 0.765 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
51. epha4b ENSDARG00000011600 3110 2.402 0.819 - - - - 0.869 0.714 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
52. pou4f1 ENSDARG00000005559 821 2.4 0.861 - - - - 0.836 0.703 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
53. ZFHX3 ENSDARG00000103057 7759 2.397 0.829 - - - - 0.823 0.745 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
54. celf4 ENSDARG00000070045 1537 2.396 0.847 - - - - 0.798 0.751 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
55. sypb ENSDARG00000002230 262 2.395 0.811 - - - - 0.882 0.702 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
56. kdm1a ENSDARG00000060679 6152 2.383 0.748 - - - 0.865 - 0.770 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
57. neurog1 ENSDARG00000056130 3924 2.383 0.820 - - - - 0.847 0.716 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
58. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.382 0.711 - - - - 0.921 0.750 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
59. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.381 0.703 - - - - 0.920 0.758 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
60. snap25a ENSDARG00000020609 4537 2.38 0.847 - - - - 0.816 0.717 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
61. elavl4 ENSDARG00000045639 998 2.375 0.744 - - - - 0.888 0.743 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
62. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.373 0.823 - - - - 0.774 0.776 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
63. her2 ENSDARG00000038205 3219 2.373 0.879 - - - - 0.747 0.747 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
64. nadl1.1 1200 2.371 0.813 - - - - 0.841 0.717 - - neural adhesion molecule L1.1, transcript variant X1
65. irx1b ENSDARG00000056594 2224 2.37 0.818 - - - - 0.801 0.751 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
66. jag1a ENSDARG00000030289 1275 2.366 0.821 - - - - 0.789 0.756 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
67. stx1b ENSDARG00000000503 2724 2.365 0.782 - - - - 0.860 0.723 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
68. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.363 0.915 - - - - 0.727 0.721 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
69. APBB3 ENSDARG00000053771 654 2.358 0.774 - - - - 0.846 0.738 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
70. scn8aa ENSDARG00000005775 792 2.357 0.775 - - - - 0.877 0.705 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
71. scn2b ENSDARG00000101713 796 2.357 0.718 - - - - 0.901 0.738 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
72. lhx1a ENSDARG00000014018 958 2.35 0.722 - - - - 0.887 0.741 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
73. rab3ab ENSDARG00000043835 1267 2.35 0.863 - - - - 0.779 0.708 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
74. cdk5r1b ENSDARG00000045087 2075 2.347 0.752 - - - - 0.893 0.702 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
75. nes ENSDARG00000088805 2710 2.343 0.801 - - - - 0.809 0.733 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
76. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.343 0.865 - - - - 0.755 0.723 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
77. vim ENSDARG00000010008 3551 2.335 0.776 - - - - 0.850 0.709 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
78. EFCC1 ENSDARG00000077826 1359 2.335 0.800 - - - - 0.811 0.724 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
79. syt3 ENSDARG00000075830 430 2.329 0.799 - - - - 0.796 0.734 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
80. ptpn5 ENSDARG00000074866 548 2.311 0.736 - - - - 0.811 0.764 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
81. vgf ENSDARG00000105529 247 2.302 0.711 - - - - 0.862 0.729 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
82. TUBB8P7_2 TUBB8P7_2 565 2.301 0.743 - - - - 0.837 0.721 - -
83. nmnat2 ENSDARG00000004580 370 2.292 0.794 - - - - 0.772 0.726 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
84. cadm3 ENSDARG00000057013 1545 2.274 0.738 - - - - 0.825 0.711 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
85. zic4 ENSDARG00000031307 1228 2.273 0.745 - - - - 0.770 0.758 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
86. CAMSAP3 ENSDARG00000059475 263 2.268 0.712 - - - - 0.819 0.737 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
87. rtn1b ENSDARG00000021143 1682 2.257 0.776 - - - - 0.762 0.719 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
88. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.252 0.824 - - - - 0.707 0.721 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
89. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.248 0.723 - - - - 0.760 0.765 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
90. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.247 0.758 - - - - 0.771 0.718 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
91. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.247 0.789 - - - - 0.745 0.713 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
92. MAP1A MAP1A 847 2.244 0.738 - - - - 0.764 0.742 - -
93. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.244 0.814 - - - - 0.716 0.714 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
94. dpysl5a ENSDARG00000011141 1827 2.228 0.818 - - - - 0.709 0.701 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
95. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.221 0.768 - - - - 0.742 0.711 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
96. hmgb1b ENSDARG00000030479 10398 2.178 - - 0.717 - - 0.737 0.724 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
97. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.165 0.725 - 0.701 - - 0.739 - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
98. GADD45G GADD45G 382 2.159 0.706 - - - - 0.733 0.720 - -
99. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.927 - 0.991 - - 0.936 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
100. ing5b ENSDARG00000068175 2502 1.924 - 0.988 - - 0.936 - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]

There are 1721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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