Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scrn3

Gene Name Gene ID Reads Annotation
scrn3 ENSDARG00000016611 74 secernin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4783]










Genes with expression patterns similar to scrn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scrn3 ENSDARG00000016611 74 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secernin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4783]
2. fam83fb ENSDARG00000104188 79 1.695 - - 0.874 - - - 0.821 - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
3. zgc:113625 ENSDARG00000054160 276 1.649 0.840 - 0.809 - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
4. CABZ01064968.2 CABZ01064968.2 20 1.631 0.816 - - - - - 0.815 - -
5. CR457441.2 CR457441.2 82 1.619 - 0.756 - - - - 0.863 - -
6. C3AR1 18 1.594 0.816 - - - - - 0.778 - - C3a anaphylatoxin chemotactic receptor
7. si:ch73-155e10.1 si:ch73-155e10.1 13 1.576 0.816 - - - - - 0.760 - -
8. HAUS2 HAUS2 392 1.568 0.733 0.835 - - - - - - -
9. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.548 0.816 - - - - 0.732 - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
10. sult4a1 ENSDARG00000101967 205 1.547 0.816 - 0.731 - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
11. si:dkey-9i23.6 ENSDARG00000094678 58 1.53 0.816 - - - - - 0.714 - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
12. si:ch73-367f21.6 ENSDARG00000089953 46 1.503 0.723 - 0.780 - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
13. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.496 - 0.756 - - - - - - 0.740 calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
14. eng2b eng2b 865 1.493 - 0.733 - - - - 0.760 - -
15. adora2b ENSDARG00000002533 230 1.476 - - 0.726 - - - 0.750 - - adenosine A2b receptor [Source:ZFIN;Acc:ZDB-GENE-060511-1]
16. CHD6 ENSDARG00000017244 219 0.964 0.964 - - - - - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
17. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 0.962 - - 0.962 - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
18. HTR1E 103 0.953 - - 0.953 - - - - - - 5-hydroxytryptamine receptor 1E
19. si:dkeyp-107f9.4 ENSDARG00000104468 11 0.95 - - 0.950 - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
20. ttc36 ENSDARG00000011693 61 0.939 - - 0.939 - - - - - - tetratricopeptide repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-041114-87]
21. htr1bd htr1bd 8 0.939 - - 0.939 - - - - - -
22. U1_9 U1_9 3 0.937 - - 0.937 - - - - - -
23. satb2 ENSDARG00000061885 6 0.937 - - 0.937 - - - - - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
24. C7H19orf12 C7H19orf12 7 0.937 - - 0.937 - - - - - -
25. ISX ISX 8 0.937 - - 0.937 - - - - - -
26. pdk3a ENSDARG00000014527 15 0.936 - - - - - - 0.936 - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
27. TAF1C TAF1C 41 0.936 - - - - - - 0.936 - -
28. si:dkey-1f1.4 si:dkey-1f1.4 105 0.936 - - - - - - 0.936 - -
29. FASN ENSDARG00000087657 18 0.936 - - 0.936 - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
30. wnt8b ENSDARG00000006911 98 0.936 - - - - - - 0.936 - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
31. cnn1b ENSDARG00000102398 40 0.936 - - - - - - 0.936 - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
32. kif17 ENSDARG00000055238 12 0.936 - - 0.936 - - - - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
33. sstr1a ENSDARG00000104922 22 0.931 - - 0.931 - - - - - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
34. dnaaf1 ENSDARG00000012030 58 0.931 - - 0.931 - - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
35. CDHR2_1 CDHR2_1 12 0.931 - - 0.931 - - - - - -
36. bgna ENSDARG00000017884 9 0.93 - - 0.930 - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
37. scg5 ENSDARG00000032126, ENSDARG00000077045 29 0.928 - - 0.928 - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
38. TESK1_1 TESK1_1 276 0.923 0.923 - - - - - - - -
39. crlf1a ENSDARG00000024365 222 0.92 - 0.920 - - - - - - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
40. zgc:175280 ENSDARG00000099111 71 0.92 - - 0.920 - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
41. zgc:165582 ENSDARG00000074362 198 0.919 - - - - - - 0.919 - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
42. si:dkey-106m10.6 si:dkey-106m10.6 102 0.918 - 0.918 - - - - - - -
43. mphosph6 ENSDARG00000093007 340 0.917 - - - - - - 0.917 - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
44. QRFPR ENSDARG00000101969 47 0.916 - - - - - - 0.916 - - pyroglutamylated RFamide peptide receptor [Source:HGNC Symbol;Acc:HGNC:15565]
45. SDSL ENSDARG00000074698 34 0.916 - - 0.916 - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
46. PDE2A 122 0.915 - - - - - - 0.915 - - phosphodiesterase 2A
47. si:ch211-281p14.2 22 0.914 - - 0.914 - - - - - - si:ch211-281p14.2, transcript variant X2
48. CABZ01071911.2 CABZ01071911.2 64 0.912 - - - - - 0.912 - - -
49. KLB ENSDARG00000076294 595 0.911 - - 0.911 - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
50. si:ch211-137i24.10 ENSDARG00000057706, ENSDARG00000116375 99 0.911 - - - - - - 0.911 - - si:ch211-137i24.10 [Source:ZFIN;Acc:ZDB-GENE-060526-34]
51. VDAC3_1 VDAC3_1 35 0.91 0.910 - - - - - - - -
52. CABZ01044048.1 ENSDARG00000011463 20 0.91 - - - - - - 0.910 - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
53. si:ch211-258f1.3 ENSDARG00000105119 23 0.91 0.910 - - - - - - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
54. BX530018.2 ENSDARG00000056677 83 0.907 - - 0.907 - - - - - - OCIA domain-containing protein 1-like [Source:NCBI gene;Acc:553528]
55. ccdc103 ENSDARG00000053455 81 0.907 - - - - - - 0.907 - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
56. CABZ01068153.1 CABZ01068153.1 211 0.906 0.906 - - - - - - - -
57. SNORD36_1 SNORD36_1 44 0.905 - - 0.905 - - - - - -
58. tbc1d31 ENSDARG00000074623 94 0.902 - - - - - - 0.902 - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
59. CBLC ENSDARG00000078217 96 0.901 0.901 - - - - - - - - Cbl proto-oncogene C, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-080220-20]
60. cyb5d1 ENSDARG00000056007 67 0.892 - - - - - - 0.892 - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
61. SLC24A2_1 SLC24A2_1 13 0.889 - - 0.889 - - - - - -
62. zp3a.2 ENSDARG00000042130 163 0.888 0.888 - - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
63. supt3h ENSDARG00000098141 18 0.888 0.888 - - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
64. echdc1 68 0.888 - - - - - - 0.888 - - enoyl CoA hydratase domain containing 1, transcript variant 1
65. st6galnac_1 ENSDARG00000086292 137 0.888 0.888 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
66. crygn2 ENSDARG00000030411 2551 0.888 0.888 - - - - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
67. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 0.888 - - - - - - 0.888 - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
68. pus7l_1 ENSDARG00000069780 49 0.88 - - - - - - 0.880 - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
69. ccdc129 37 0.88 - - 0.880 - - - - - - coiled-coil domain containing 129, transcript variant X2
70. FBXO48 ENSDARG00000086184 110 0.879 - - 0.879 - - - - - - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
71. USP2_1 USP2_1 544 0.879 - - - - - - 0.879 - -
72. ITPRIPL2 88 0.879 - - - - - - 0.879 - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
73. BX005069.4 BX005069.4 61 0.876 - - - - - - 0.876 - -
74. adam19b ENSDARG00000067545 162 0.875 - 0.875 - - - - - - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
75. CU855694.1 ENSDARG00000098513 402 0.874 - - - - - - 0.874 - -
76. SLC36A4 ENSDARG00000039661 175 0.874 0.874 - - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
77. si:dkey-18j14.5 si:dkey-18j14.5 147 0.873 - - - - - - 0.873 - -
78. pcdh18a ENSDARG00000089805 1096 0.872 0.872 - - - - - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
79. ANO7 ANO7 54 0.871 - - 0.871 - - - - - -
80. hspbp1 ENSDARG00000102937 260 0.871 - - - - - - 0.871 - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
81. zgc:174712 zgc:174712 47 0.87 - 0.870 - - - - - - -
82. CR361561.3 CR361561.3 91 0.87 0.870 - - - - - - - -
83. inaa ENSDARG00000011862 115 0.867 - - 0.867 - - - - - - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
84. si:ch211-95j8.3 ENSDARG00000092580 20 0.866 - 0.866 - - - - - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
85. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 0.866 - - - - - - 0.866 - - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
86. CABZ01044023.1 ENSDARG00000117734 240 0.864 0.864 - - - - - - - -
87. zgc:111991 zgc:111991 159 0.861 - - - - - - 0.861 - -
88. cetn2 ENSDARG00000101510 541 0.86 0.860 - - - - - - - - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
89. ehf ENSDARG00000052115, ENSDARG00000112589 24 0.86 - - 0.860 - - - - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
90. tmem130 ENSDARG00000103789 756 0.859 0.859 - - - - - - - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
91. tpd52l1 ENSDARG00000042548 61 0.859 0.859 - - - - - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
92. zgc:174654 zgc:174654 54 0.859 0.859 - - - - - - - -
93. nosip ENSDARG00000037958, ENSDARG00000112335 59 0.856 - - - - - - 0.856 - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
94. CU855815.2 CU855815.2 80 0.856 - - - - - - 0.856 - -
95. larsa ENSDARG00000090988 26 0.856 - - 0.856 - - - - - - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
96. aftphb ENSDARG00000071347 161 0.855 - - 0.855 - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
97. si:ch211-152f6.6 si:ch211-152f6.6 278 0.855 - - 0.855 - - - - - -
98. prkag3b ENSDARG00000000369 1945 0.854 - 0.854 - - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
99. KLHL24 KLHL24 268 0.852 - - - - - - 0.852 - -
100. gpr158 gpr158 52 0.851 - - 0.851 - - - - - -

There are 657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA