Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scocb

Gene Name Gene ID Reads Annotation
scocb ENSDARG00000002217 1844 short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]










Genes with expression patterns similar to scocb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scocb ENSDARG00000002217 1844 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
2. lppr3a lppr3a 1294 3.247 - - - - 0.997 0.788 0.731 - 0.731
3. atp6v0cb ENSDARG00000036577 3472 3.211 - 0.752 - - - 0.923 0.810 - 0.726 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
4. plp1a ENSDARG00000103732 3544 2.729 - - - - 0.952 0.952 0.825 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
5. C7H4orf48 C7H4orf48 1455 2.72 - - - - 0.997 0.954 0.769 - -
6. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.505 - - - - 0.947 0.756 0.802 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
7. nrarpb ENSDARG00000018958 6225 2.491 - - - - - 0.894 0.813 - 0.784 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
8. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.471 - - - - - 0.948 0.767 - 0.756 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
9. CYTH2 ENSDARG00000028800 2349 2.466 - - - - - 0.944 0.817 - 0.705 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
10. arid1aa ENSDARG00000101710 3644 2.462 - - - - 0.899 0.852 - - 0.711 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
11. cdk6 ENSDARG00000070228 1778 2.454 - - - - 0.992 - - 0.723 0.739 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
12. gap43 ENSDARG00000099744 4114 2.453 - - - - - 0.936 0.760 - 0.757 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
13. dpysl5a ENSDARG00000011141 1827 2.447 - - - - - 0.945 0.783 - 0.719 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
14. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.44 - - - - 0.890 0.842 - - 0.708 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
15. zbtb18 ENSDARG00000028228 3653 2.428 - - - - - 0.947 - 0.707 0.774 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
16. tuba1c ENSDARG00000055216 8384 2.427 - - - - - 0.907 0.791 - 0.729 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
17. ptbp2b ENSDARG00000015901 2458 2.424 - - - - - 0.923 0.731 - 0.770 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
18. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.423 - - - - - 0.961 0.728 - 0.734
19. cadm3 ENSDARG00000057013 1545 2.408 - - - - - 0.915 0.717 - 0.776 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
20. tuba2 ENSDARG00000045014 1490 2.405 - - - - - 0.949 0.712 - 0.744 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
21. hnrnpub ENSDARG00000004735 16496 2.387 - - - - - 0.847 0.768 - 0.772 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
22. dnajc5aa ENSDARG00000042948 2885 2.385 - - - - - 0.747 0.852 - 0.786 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
23. tmeff1b ENSDARG00000056740 11253 2.372 - - - - 0.812 0.808 0.752 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
24. ndrg4 ENSDARG00000103937 1234 2.369 - - - - - 0.923 0.738 - 0.708 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
25. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.35 - - - - - 0.858 0.749 - 0.743 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
26. her4.1 ENSDARG00000056732 1264 2.35 - - - - - 0.893 0.751 0.706 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
27. onecutl ENSDARG00000040253 2143 2.35 - 0.705 - - - 0.787 0.858 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
28. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.349 - - - - - 0.787 0.766 - 0.796 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
29. Sep-03 Sep-03 1124 2.34 - - - - - 0.868 0.738 - 0.734
30. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.339 - - - - - 0.835 0.706 - 0.798 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
31. tox ENSDARG00000032317 9126 2.332 - - - - - 0.806 0.774 - 0.752 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
32. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.322 - - - - 0.856 0.747 - - 0.719 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
33. snrpa ENSDARG00000018890 4593 2.319 - 0.867 - - - - - 0.746 0.706 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
34. her12 ENSDARG00000032963 754 2.31 - - - - - 0.704 0.819 0.787 - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
35. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.297 - - - - 0.794 0.789 0.714 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
36. TMEM57 TMEM57 260 2.274 - - - - - 0.824 0.746 - 0.704
37. msl2a ENSDARG00000038909 1357 2.262 - - - - - 0.766 0.781 0.715 - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
38. nbeaa ENSDARG00000070080 862 2.248 - - - - - 0.729 0.763 - 0.756 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
39. arnt2 ENSDARG00000103697 5731 2.241 - - - - - 0.739 0.798 - 0.704 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
40. EML6 250 2.238 - - - - - 0.817 0.719 - 0.702 echinoderm microtubule associated protein like 6
41. top2b ENSDARG00000034195 3715 2.232 0.814 0.700 - - - - 0.718 - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
42. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.22 - - - - - 0.796 0.721 0.703 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
43. si:dkey-28b4.8 ENSDARG00000002840 1277 2.205 - 0.701 - - - 0.758 0.746 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
44. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.198 - - - - - 0.724 0.755 0.719 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
45. thoc7 ENSDARG00000015394 3824 2.187 0.725 0.734 - - - 0.728 - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
46. fzd3a ENSDARG00000021664 1958 2.181 - - - - - 0.710 0.746 - 0.725 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
47. lhx1a ENSDARG00000014018 958 2.172 - - - - - 0.705 0.727 - 0.740 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
48. RNF38 ENSDARG00000062055 3901 1.87 - - - - 0.992 0.878 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
49. atp6ap1a ENSDARG00000041417 898 1.839 - - - - - 0.921 0.918 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
50. stmn1b ENSDARG00000033655 9491 1.825 - - - - - 0.965 0.860 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
51. dbx2 2971 1.797 - - - - 0.995 - 0.802 - - developing brain homeobox 2
52. MAPRE2 ENSDARG00000099943 3041 1.785 - - - - 0.992 - 0.793 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
53. fmnl2b ENSDARG00000075041 1744 1.782 - - - - 0.976 0.806 - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
54. pcsk1nl ENSDARG00000076170 1232 1.774 - - - - - 0.959 0.815 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
55. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.773 - - - - 0.991 - 0.782 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
56. hmp19 2554 1.773 - - - - - 0.964 0.809 - - HMP19 protein
57. ADAM22 ENSDARG00000060532 2259 1.768 - - - - - 0.961 0.807 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
58. stxbp1a ENSDARG00000001994 5154 1.766 - - - - - 0.961 0.805 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
59. pcdh1gc5 ENSDARG00000104826 10052 1.765 - - - - - 0.958 0.807 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
60. sez6l2 ENSDARG00000076052 360 1.765 - - - - - 0.966 0.799 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
61. slc1a3a ENSDARG00000104431 9888 1.765 - - - - - 0.943 0.822 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
62. rap2ip rap2ip 681 1.764 - - - - - 0.950 0.814 - -
63. syt11a ENSDARG00000057913 1145 1.763 - - - - - 0.957 0.806 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
64. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.758 - - - - - 0.917 0.841 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
65. mapk12b ENSDARG00000006409 2246 1.756 - - - - - 0.950 0.806 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
66. C19H7orf41 C19H7orf41 2243 1.756 - - - - - 0.955 0.801 - -
67. rmnd5b ENSDARG00000043359 3054 1.754 - - - - 0.952 0.802 - - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
68. nkx6.1 ENSDARG00000022569 3779 1.752 - - - - 0.973 - 0.779 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
69. glra1 ENSDARG00000012019 315 1.751 - - - - - 0.952 0.799 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
70. si:ch73-21g5.7 ENSDARG00000093156 9412 1.75 - - - - - 0.944 0.806 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
71. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.75 - - - - - 0.945 0.805 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
72. nptx1l ENSDARG00000074671 569 1.75 - - - - - 0.934 0.816 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
73. acvr1b acvr1b 2963 1.749 - - - - 0.995 - - - 0.754
74. st18 663 1.749 - - - - - 0.960 0.789 - - suppression of tumorigenicity 18, zinc finger
75. dnajc6 ENSDARG00000079891 438 1.748 - - - - - 0.947 0.801 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
76. st8sia5 ENSDARG00000036584 529 1.746 - - - - - 0.948 0.798 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
77. nrn1a ENSDARG00000071860 1311 1.743 - - - - - 0.942 0.801 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
78. atp2b3b ENSDARG00000023445 1424 1.743 - - - - - 0.942 0.801 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
79. BX957337.1 BX957337.1 1685 1.74 - - - - - 0.964 0.776 - -
80. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.737 - 0.746 - - 0.991 - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
81. notch1b ENSDARG00000052094 7874 1.736 - - - - - 0.938 0.798 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
82. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.734 - - - - - 0.956 0.778 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
83. st8sia2 ENSDARG00000018788 2183 1.733 - - - - - 0.924 0.809 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
84. cnrip1a ENSDARG00000091683 1491 1.732 - - - - - 0.927 0.805 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
85. eno2 ENSDARG00000014287 2162 1.732 - - - - - 0.922 0.810 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
86. mllt11 ENSDARG00000071026 2518 1.73 - - - - - 0.926 0.804 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
87. e2f7 ENSDARG00000008986 1439 1.729 - 0.734 - - 0.995 - - - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
88. stmn2a ENSDARG00000033234 2272 1.728 - - - - - 0.973 0.755 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
89. anapc10 ENSDARG00000090152 1406 1.727 - - - - 0.995 - - 0.732 - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
90. ROBO3_1 ROBO3_1 468 1.726 - - - - - 0.971 0.755 - -
91. spock2 ENSDARG00000075393 791 1.726 - - - - - 0.968 0.758 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
92. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.725 - - - - - 0.945 0.780 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
93. lhx5 ENSDARG00000057936 785 1.724 - - - - - 0.935 0.789 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
94. gfap ENSDARG00000025301 5584 1.724 - - - - - 0.918 0.806 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
95. nexmifb ENSDARG00000029296 416 1.722 - - - - - 0.947 0.775 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
96. scn1lab ENSDARG00000062744 155 1.719 - - - - - 0.920 0.799 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
97. st6gal1 ENSDARG00000044514 142 1.719 - - - - - 0.913 0.806 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
98. slc17a6b ENSDARG00000041150 823 1.714 - - - - - 0.967 0.747 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
99. ZFHX3 ENSDARG00000103057 7759 1.714 - - - - - 0.855 0.859 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
100. her15.2 her15.2 1701 1.714 - - - - - 0.922 0.792 - -

There are 2037 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA