Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sco2

Gene Name Gene ID Reads Annotation
sco2 ENSDARG00000045555 219 SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]










Genes with expression patterns similar to sco2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sco2 ENSDARG00000045555 219 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
2. si:ch211-89o9.6 ENSDARG00000075639 382 1.743 - 0.877 - - - - 0.866 - - si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]
3. rxrgb ENSDARG00000004697 332 1.611 0.735 0.876 - - - - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
4. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 1.588 0.724 - - - - - 0.864 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
5. wu:fd44f01 wu:fd44f01 391 1.548 - - - - - 0.770 0.778 - -
6. marveld3 ENSDARG00000099654 113 1.539 - - - - - 0.839 0.700 - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
7. lancl1 ENSDARG00000013741 563 1.53 - 0.765 - - - 0.765 - - - LanC antibiotic synthetase component C-like 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040924-1]
8. frmd6 ENSDARG00000002332 2698 1.522 - 0.770 - - - - 0.752 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
9. ctnna2 ENSDARG00000024785 968 1.496 0.791 0.705 - - - - - - - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
10. efcab2 ENSDARG00000074323 88 1.491 0.728 0.763 - - - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
11. mphosph10 ENSDARG00000012495 1679 1.473 - 0.734 - - - 0.739 - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
12. cib1 ENSDARG00000103118 291 1.433 - - - - - 0.704 0.729 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
13. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.431 - 0.705 - - - 0.726 - - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
14. cd248b ENSDARG00000077938 2561 1.41 - 0.702 - - - 0.708 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
15. FOXN2 FOXN2 118 0.958 - - - - - 0.958 - - -
16. cdc7 ENSDARG00000023584 536 0.95 - - - - - 0.950 - - - cell division cycle 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-113]
17. uqcrfs1 ENSDARG00000007745 4654 0.921 - - - - - 0.921 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
18. gas8 ENSDARG00000101431 140 0.919 - - - - - - 0.919 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
19. mlh1 ENSDARG00000025948 130 0.918 - - - - - - 0.918 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
20. ctdspl2b ENSDARG00000060586 1682 0.913 - - - - - - 0.913 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
21. ZBTB8A ENSDARG00000059226 98 0.905 - - - - - - 0.905 - - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
22. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.904 - - - - - - 0.904 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
23. dnmt3aa ENSDARG00000005394 63 0.903 0.903 - - - - - - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
24. AP5B1 ENSDARG00000078805 62 0.901 - - - - - - 0.901 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
25. fer ENSDARG00000012196 83 0.901 - - - - - - 0.901 - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
26. gfm2 ENSDARG00000005561 302 0.899 - - - - - - 0.899 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
27. arpc5lb ENSDARG00000035433 726 0.898 - - - - - - 0.898 - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
28. si:dkey-70e17.2 si:dkey-70e17.2 371 0.893 - - - - - - 0.893 - -
29. ift52 ENSDARG00000045025 606 0.892 - - - - - 0.892 - - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
30. cacna2d1a ENSDARG00000014804 1924 0.891 - 0.891 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
31. txnl4b ENSDARG00000058962 296 0.89 - 0.890 - - - - - - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
32. cyp27a1.4 ENSDARG00000055159 47 0.889 - - - - - - 0.889 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
33. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 0.889 - - - - - - 0.889 - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
34. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 0.888 - - - - - - 0.888 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
35. si:dkey-169i5.4 ENSDARG00000077862 511 0.888 - - - - - - 0.888 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
36. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.888 - - - - - - 0.888 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
37. GLIS2 GLIS2 141 0.887 - - - - - - 0.887 - -
38. CR848032.1 ENSDARG00000102710 338 0.887 - - - - - - 0.887 - -
39. HERC4 ENSDARG00000059936 369 0.886 - - - - - - 0.886 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
40. TAF4 TAF4 658 0.886 - - - - - - 0.886 - -
41. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.885 - - - - - - 0.885 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
42. inpp5f ENSDARG00000061437 1228 0.883 - - - - - - 0.883 - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
43. si:ch73-186j5.4 si:ch73-186j5.4 70 0.883 - - - - - - 0.883 - -
44. si:dkey-183n20.2 si:dkey-183n20.2 210 0.882 - - - - - 0.882 - - -
45. hs3st3l ENSDARG00000059903 184 0.882 - - - - - - 0.882 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
46. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.882 - - - - - - 0.882 - -
47. CU306817.2 CU306817.2 406 0.88 - 0.880 - - - - - - -
48. si:ch211-197g15.8 ENSDARG00000094984 218 0.879 - - - - - - 0.879 - - si:ch211-197g15.8 [Source:ZFIN;Acc:ZDB-GENE-050208-377]
49. slc5a11 ENSDARG00000019932 160 0.878 - - - - - - 0.878 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
50. olfml2bb ENSDARG00000021480 256 0.878 - - - - - - 0.878 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
51. CABZ01112521.1 CABZ01112521.1 83 0.877 - - - - - - 0.877 - -
52. CABZ01079241.1 ENSDARG00000098424 88 0.877 - - - - - - 0.877 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
53. si:zfos-364h11.1 99 0.876 - - - - - - 0.876 - - si:zfos-364h11.1, transcript variant X4
54. coq4 ENSDARG00000104733 402 0.876 - 0.876 - - - - - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
55. CT583625.2 ENSDARG00000094770 57 0.876 - - - - - 0.876 - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
56. trim3b ENSDARG00000005397 680 0.875 - - - - - - 0.875 - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
57. GPSM3 GPSM3 257 0.874 - - - - - - 0.874 - -
58. cbln2a ENSDARG00000074601 12 0.873 - - - - - - 0.873 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
59. sgsm3 ENSDARG00000019038 352 0.872 - - - - - - 0.872 - - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
60. satb1a ENSDARG00000057649 250 0.869 - - - - - - 0.869 - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
61. cdc45 ENSDARG00000043720 353 0.869 - - - - - - 0.869 - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
62. DFNA5 DFNA5 201 0.868 - - - - - - 0.868 - -
63. hsd17b7_1 ENSDARG00000088140 36 0.867 - - - - - - 0.867 - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
64. scn3b ENSDARG00000062359 242 0.866 - - - - - - 0.866 - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
65. hspa12a ENSDARG00000070603 1474 0.864 - - - - - - 0.864 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
66. si:ch211-212k5.1 ENSDARG00000110637 337 0.863 - - - - - 0.863 - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
67. lrrc24 ENSDARG00000101704 224 0.862 - - - - - - 0.862 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
68. PPP1R35 ENSDARG00000068916 94 0.861 - - - - - - 0.861 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
69. pik3cg ENSDARG00000017757 157 0.861 - - - - - - 0.861 - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
70. OLFM4_1 OLFM4_1 213 0.86 - - - - - - 0.860 - -
71. TSSC4 ENSDARG00000036144 1994 0.859 - - - - - 0.859 - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
72. si:ch73-211l2.1 605 0.859 - - - - - - 0.859 - - si:ch73-211l2.1
73. rcc1 ENSDARG00000037158 1165 0.859 - - - - - - 0.859 - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
74. eno1b ENSDARG00000013750 63 0.858 - - - - - - 0.858 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
75. CDA 491 0.858 - 0.858 - - - - - - - cytidine deaminase
76. banp ENSDARG00000017562 296 0.858 - - - - - - 0.858 - - BTG3 associated nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050522-54]
77. nsun5 ENSDARG00000043209 764 0.858 - - - - - 0.858 - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
78. CDH8 172 0.856 - - - - - - 0.856 - - cadherin 8
79. arhgef12b ENSDARG00000100913 1358 0.856 - - - - - - 0.856 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
80. fosb ENSDARG00000055751 170 0.856 - - - - - - 0.856 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
81. dgat1b ENSDARG00000054914 119 0.855 - - - - - - 0.855 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
82. WDR48 WDR48 448 0.855 - - - - - - 0.855 - -
83. nlgn4a 102 0.855 - - - - - - 0.855 - - neuroligin 4a, transcript variant X1
84. mrap ENSDARG00000091992 9 0.855 - - - - - - 0.855 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
85. napepld ENSDARG00000009252 228 0.855 - - - - - - 0.855 - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
86. ZCCHC2 ENSDARG00000067950 204 0.855 - - - - - 0.855 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
87. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.855 - - - - - - 0.855 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
88. CU570684.5 CU570684.5 55 0.854 - - - - - - 0.854 - -
89. ndrg3a ENSDARG00000013087 5581 0.854 - - - - - 0.854 - - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
90. ADRA1B ADRA1B 319 0.854 - - - - - 0.854 - - -
91. rgs3a ENSDARG00000099746 727 0.854 - - - - - - 0.854 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
92. CU570781.1 ENSDARG00000094656 49 0.853 - - - - - - 0.853 - -
93. dscama ENSDARG00000024865 75 0.853 - - - - - - 0.853 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
94. MIS12 ENSDARG00000026454 649 0.853 - - - - - - 0.853 - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
95. SHF SHF 92 0.853 - - - - - - 0.853 - -
96. kcnh7 ENSDARG00000062687 172 0.851 - - - - - - 0.851 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
97. CABZ01066717.1 CABZ01066717.1 351 0.851 0.851 - - - - - - - -
98. si:ch211-113e8.11 ENSDARG00000076585 721 0.851 - - - - - - 0.851 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
99. timm17b ENSDARG00000060124 125 0.85 - - - - - - 0.850 - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
100. mapre3b ENSDARG00000102878 362 0.85 - - - - - - 0.850 - - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]

There are 711 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA