Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scnm1

Gene Name Gene ID Reads Annotation
scnm1 ENSDARG00000003027 256 sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]










Genes with expression patterns similar to scnm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scnm1 ENSDARG00000003027 256 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
2. MKL2_1 MKL2_1 292 1.728 - - - - - - 0.854 0.874 -
3. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 1.686 - 0.754 - - - - - 0.932 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
4. si:dkey-238g7.2 si:dkey-238g7.2 181 1.65 - - - - - - 0.743 0.907 -
5. si:ch73-248e21.7 ENSDARG00000096331 176 1.645 - 0.743 - - - - 0.902 - - si:ch73-248e21.7 [Source:ZFIN;Acc:ZDB-GENE-120215-231]
6. nphp4 ENSDARG00000069014 77 1.636 - - - - - - - 0.927 0.709 nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
7. zgc:109744 ENSDARG00000070800 262 1.632 - - - - - - 0.732 0.900 - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
8. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 1.628 - 0.709 - - - - - 0.919 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
9. crfb5 crfb5 342 1.626 - - - - - 0.741 - 0.885 -
10. chkb ENSDARG00000063167 440 1.615 - - - - - - 0.738 0.877 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
11. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 1.614 - - - - - - - 0.910 0.704 forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
12. zgc:103438 ENSDARG00000035663 46 1.592 - 0.735 - - - - 0.857 - - zgc:103438 [Source:ZFIN;Acc:ZDB-GENE-041010-131]
13. STYK1 108 1.58 - 0.740 - - - - - - 0.840 serine/threonine/tyrosine kinase 1
14. CT583728.14 ENSDARG00000112295 911 1.577 - - - - - 0.737 0.840 - -
15. serpine3 ENSDARG00000057108 49 1.573 - - 0.742 - - - - - 0.831 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
16. SYMPK ENSDARG00000059553 1159 1.556 - 0.796 - - - - - 0.760 - symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
17. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 1.551 - - - - - - 0.747 0.804 - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
18. adnp2a ENSDARG00000060937 562 1.55 - 0.799 - - - 0.751 - - - ADNP homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040914-55]
19. cry3 cry3 483 1.528 - - - - - 0.789 0.739 - -
20. trappc2 ENSDARG00000097660 760 1.517 - 0.732 - - - - - 0.785 - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
21. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.516 - 0.797 - - - - 0.719 - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
22. ttpal ENSDARG00000070644, ENSDARG00000112925 471 1.505 - - - - - 0.712 0.793 - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
23. ZNF784_2 ZNF784_2 181 1.491 - 0.722 - - - - - - 0.769
24. als2b ENSDARG00000076924 738 1.49 0.740 - - - - - - 0.750 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
25. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.481 - 0.720 0.761 - - - - - - adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
26. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.476 - 0.762 - - - - - 0.714 - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
27. ptprc ENSDARG00000071437 104 1.47 - - 0.702 - - - - - 0.768 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
28. tmem245 ENSDARG00000070455 264 1.455 - - - - - 0.732 - - 0.723 transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
29. EMP3 EMP3 523 1.433 - - 0.711 - - - 0.722 - -
30. si:dkey-238o14.5 si:dkey-238o14.5 450 1.432 - 0.700 - - - - 0.732 - -
31. deptor ENSDARG00000040930 191 0.934 - - - - - - 0.934 - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
32. si:dkey-42p8.3 1117 0.927 - - - - - - - 0.927 - si:dkey-42p8.3, transcript variant X1
33. fam8a1 fam8a1 561 0.927 - - - - - - - 0.927 -
34. CT573468.1 CT573468.1 283 0.926 - - - - - - - 0.926 -
35. atrip ENSDARG00000063076 385 0.926 - - - - - - - 0.926 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
36. nlgn1 ENSDARG00000077710 72 0.926 - - - - - - - 0.926 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
37. nmt2 ENSDARG00000021808 510 0.925 - - - - - - - 0.925 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
38. GABRR1 ENSDARG00000043902 71 0.924 - - - - - - - 0.924 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
39. GPR137B GPR137B 50 0.924 - - - - - - - 0.924 -
40. mob3c ENSDARG00000043705 306 0.924 - - - - - - - 0.924 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
41. BX511006.2 BX511006.2 29 0.922 - - - - - - - 0.922 -
42. trmt5 ENSDARG00000069278 228 0.922 - - - - - - - 0.922 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
43. zc3h10 ENSDARG00000030335 236 0.922 - - - - - - - 0.922 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
44. zgc:171459 ENSDARG00000077248 224 0.92 - - - - - - - 0.920 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
45. cul1b ENSDARG00000007691 719 0.92 - - - - - - - 0.920 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
46. ba1 69 0.919 - - - - - - - 0.919 - ba1 globin
47. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.919 - - - - - - - 0.919 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
48. bcl3 ENSDARG00000087832 69 0.919 - - - - - - - 0.919 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
49. ubr1 ENSDARG00000060480 71 0.919 - - - - - - - 0.919 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
50. KIF21B ENSDARG00000009733 53 0.919 - - - - - - - 0.919 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
51. PHC3 ENSDARG00000074604 239 0.918 - - - - - - - 0.918 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
52. slc5a3a ENSDARG00000010376 134 0.918 - - - - - - - 0.918 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
53. ANKLE1 ANKLE1 346 0.917 - - - - - - - 0.917 -
54. srd5a2a ENSDARG00000043587 21 0.916 - - - - - - - 0.916 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
55. tmprss13b ENSDARG00000077573 47 0.916 - - - - - - - 0.916 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
56. atraid ENSDARG00000043388 648 0.915 - - - - - - 0.915 - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
57. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.915 - - - - - - - 0.915 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
58. nfybb ENSDARG00000045611, ENSDARG00000110926 350 0.915 - 0.915 - - - - - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
59. spop ENSDARG00000100519 177 0.913 - - - - - - - 0.913 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
60. CPNE8_1 CPNE8_1 140 0.913 - - - - - - - 0.913 -
61. si:zfos-364h11.1 99 0.912 - - - - - - - 0.912 - si:zfos-364h11.1, transcript variant X4
62. CABZ01078431.1 CABZ01078431.1 183 0.912 - - - - - - - 0.912 -
63. tab1 ENSDARG00000036613 445 0.911 - - - - - - 0.911 - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
64. si:ch1073-174d20.2 ENSDARG00000079651 171 0.911 - - - - - - - 0.911 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
65. gpr137 ENSDARG00000037244 801 0.911 - - - - - - - 0.911 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
66. tmem180 tmem180 430 0.911 - - - - - - - 0.911 -
67. ASPH ENSDARG00000055945 214 0.91 - - - - - - - 0.910 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
68. si:dkey-152b24.6 ENSDARG00000105043 39 0.909 - - - - - - - 0.909 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
69. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.909 - - - - - - - 0.909 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
70. si:ch211-282k23.2 ENSDARG00000093591 447 0.909 - - - - - - - 0.909 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
71. RHBDF1 RHBDF1 131 0.909 - - - - - - - 0.909 -
72. lrriq1 ENSDARG00000093781 83 0.909 - - - - - - - 0.909 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
73. nanp ENSDARG00000075143, ENSDARG00000114467 328 0.908 - - - - - - - 0.908 - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
74. ZNF362 ZNF362 638 0.908 - - - - - - - 0.908 -
75. prkab1a ENSDARG00000044183 264 0.907 - - - - - - - 0.907 - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
76. leng1 ENSDARG00000037633 351 0.906 - - - - - - - 0.906 - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
77. CABZ01088330.1 CABZ01088330.1 679 0.906 - 0.906 - - - - - - -
78. ovol1 1037 0.906 - - - - - - - 0.906 - ovo-like zinc finger 1, transcript variant X1
79. trmt10c ENSDARG00000041575 447 0.904 - - - - - - - 0.904 - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:ZFIN;Acc:ZDB-GENE-041114-12]
80. PRC1 PRC1 583 0.904 - - - - - - - 0.904 -
81. hoxa11a ENSDARG00000104162 283 0.902 - - - - - - - 0.902 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
82. zgc:56585 ENSDARG00000026236 704 0.9 - - - - - - - 0.900 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
83. ZBTB8A ENSDARG00000059226 98 0.899 - - - - - - - 0.899 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
84. CU469544.1 CU469544.1 219 0.899 - - - - - - - 0.899 -
85. THEM6_1 ENSDARG00000103914 469 0.896 - - - - - - - 0.896 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
86. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.896 - - - - - - - 0.896 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
87. GFRAL ENSDARG00000089709 167 0.895 - - - - - - - 0.895 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
88. cnn1b ENSDARG00000102398 40 0.894 - - - - - - - 0.894 - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
89. BX897726.3 BX897726.3 220 0.893 - - - - - - - 0.893 -
90. si:ch211-67e16.2 41 0.892 - - - - - - 0.892 - - si:ch211-67e16.2, transcript variant X2
91. LRIF1 LRIF1 135 0.892 - - - - - - 0.892 - -
92. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 0.892 - - - - - - - 0.892 - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
93. mier1b ENSDARG00000001447 1680 0.891 - - - - - - - 0.891 - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
94. scaper ENSDARG00000023104 491 0.891 - - - - - - - 0.891 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
95. zcchc17 ENSDARG00000018936 1577 0.89 - - - - - - - 0.890 - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
96. mao ENSDARG00000023712 1448 0.889 - - - - - - 0.889 - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
97. pdk1 ENSDARG00000013128 526 0.889 - - - - - - - 0.889 - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
98. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 0.889 - - - - - - - 0.889 - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
99. hbl1 ENSDARG00000068221 116 0.888 - - - - - - 0.888 - - hexose-binding lectin 1 [Source:ZFIN;Acc:ZDB-GENE-070912-285]
100. rxrgb ENSDARG00000004697 332 0.887 - - - - - - - 0.887 - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]

There are 837 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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