Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn8ab

Gene Name Gene ID Reads Annotation
scn8ab ENSDARG00000018032, ENSDARG00000112543 883 sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]










Genes with expression patterns similar to scn8ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
2. cdk5r1b ENSDARG00000045087 2075 3.722 0.856 0.975 - - - 0.908 0.983 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
3. snap25a ENSDARG00000020609 4537 3.69 0.964 0.812 - - - 0.969 0.945 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
4. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 3.602 0.858 0.857 - - - 0.935 0.952 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
5. adam11 ENSDARG00000079204 298 3.579 0.965 0.820 - - - 0.908 0.886 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
6. TUBB8P7_1 TUBB8P7_1 2722 3.575 0.888 0.809 - - - 0.975 0.903 - -
7. gap43 ENSDARG00000099744 4114 3.528 0.957 0.718 - - - 0.940 0.913 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
8. STMN3 ENSDARG00000038465 1009 3.515 0.959 - - - - 0.816 0.959 0.781 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
9. rab3ab ENSDARG00000043835 1267 3.5 0.871 0.742 - - - 0.939 0.948 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
10. mllt11 ENSDARG00000071026 2518 3.486 0.899 0.784 - - - 0.952 0.851 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
11. Sep-03 Sep-03 1124 3.484 0.789 0.967 - - - 0.939 0.789 - -
12. scn8aa ENSDARG00000005775 792 3.475 0.846 - - 0.728 - 0.952 0.949 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
13. cspg5a ENSDARG00000069981 1699 3.462 0.843 0.886 - - - 0.828 0.905 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
14. sh3gl2 sh3gl2 1305 3.457 0.750 0.814 - - - 0.932 0.961 - -
15. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.422 0.854 0.704 - - - 0.912 0.952 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
16. nbeaa ENSDARG00000070080 862 3.422 0.848 0.794 - - - 0.816 0.964 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
17. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 3.421 0.831 0.799 - - - 0.830 0.961 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
18. adcyap1b ENSDARG00000027740 1539 3.401 0.938 0.798 - - - 0.943 0.722 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
19. ppp3ca ENSDARG00000004988 615 3.4 0.783 0.897 - - - 0.808 0.912 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
20. nova2 ENSDARG00000017673 7685 3.399 0.887 0.736 - - - 0.893 0.883 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
21. fgf13b ENSDARG00000056633 455 3.351 0.722 0.840 - - - 0.906 0.883 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
22. SV2A ENSDARG00000059945 1278 3.315 0.835 0.890 - 0.714 - - 0.876 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
23. eno2 ENSDARG00000014287 2162 3.305 0.878 0.753 - - - 0.831 0.843 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
24. irx1b ENSDARG00000056594 2224 3.296 0.806 0.815 - - - 0.770 0.905 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
25. tmie ENSDARG00000069423 305 3.27 0.834 - - - - 0.705 0.895 0.836 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
26. grin1a ENSDARG00000027828 1327 3.248 0.719 - - - - 0.901 0.903 0.725 - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
27. C19H7orf41 C19H7orf41 2243 3.243 0.755 0.768 - - - 0.762 0.958 - -
28. neurog1 ENSDARG00000056130 3924 3.241 0.793 0.773 - - - 0.763 0.912 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
29. zic2b ENSDARG00000037178, ENSDARG00000112354 993 3.227 0.729 0.927 - - - 0.763 0.808 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
30. rtn1b ENSDARG00000021143 1682 3.182 0.726 0.724 - - - 0.928 0.804 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
31. C7H4orf48 C7H4orf48 1455 3.177 0.746 0.741 - - - 0.907 0.783 - -
32. map1aa ENSDARG00000059601 599 3.173 0.725 - - 0.777 - 0.842 0.829 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
33. nadl1.2 695 3.147 0.869 0.700 - - - - 0.765 0.813 - neural adhesion molecule L1.2, transcript variant X1
34. C8H1orf106 C8H1orf106 2690 3.046 0.829 0.701 - - - 0.750 0.766 - -
35. tuba1c ENSDARG00000055216 8384 2.871 0.942 - - - - 0.963 0.966 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
36. dpysl3 ENSDARG00000002587 4381 2.841 0.969 - - - - 0.919 0.953 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
37. rbfox3 rbfox3 1443 2.838 0.940 - - - - 0.933 0.965 - -
38. slc32a1 ENSDARG00000059775 1092 2.837 0.931 - - - - 0.945 0.961 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
39. amph ENSDARG00000007663 599 2.835 0.978 - - - - 0.889 0.968 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
40. lhx1a ENSDARG00000014018 958 2.835 0.931 - - - - 0.926 0.978 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
41. slc1a2b ENSDARG00000102453 3136 2.833 0.906 - - - - 0.986 0.941 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
42. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.815 0.935 - - - - 0.912 0.968 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
43. TUSC5 TUSC5 1436 2.809 0.923 - - - - 0.912 0.974 - -
44. scrt2 ENSDARG00000056175 4331 2.797 0.883 - - - - 0.941 0.973 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
45. stx1b ENSDARG00000000503 2724 2.783 0.863 - - - - 0.943 0.977 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
46. MAPK8IP1_1 MAPK8IP1_1 186 2.781 0.942 - - - - 0.911 0.928 - -
47. cadm3 ENSDARG00000057013 1545 2.768 0.847 - - - - 0.947 0.974 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
48. lhx5 ENSDARG00000057936 785 2.763 0.902 - - - - 0.922 0.939 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
49. stmn2a ENSDARG00000033234 2272 2.761 0.909 - - - - 0.888 0.964 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
50. stmn4l ENSDARG00000043932 654 2.751 0.844 - - - - 0.932 0.975 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
51. vamp1 ENSDARG00000031283 3094 2.748 0.897 0.900 - - - 0.951 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
52. pou4f1 ENSDARG00000005559 821 2.746 0.896 - - - - 0.910 0.940 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
53. MAP1A MAP1A 847 2.746 0.841 - - - - 0.932 0.973 - -
54. aplp1 ENSDARG00000098368 2317 2.742 0.901 0.970 - - - 0.871 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
55. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.739 0.790 - - - - 0.967 0.982 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
56. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.734 0.887 - - - - 0.886 0.961 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
57. clstn3 ENSDARG00000073883 590 2.732 0.849 - - - - 0.904 0.979 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
58. gfap ENSDARG00000025301 5584 2.728 0.868 - - - - 0.903 0.957 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
59. cplx2l ENSDARG00000018997 3975 2.726 0.857 0.898 - - - - 0.971 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
60. kcnc3a ENSDARG00000055855 1821 2.712 0.760 - - - - 0.972 0.980 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
61. stmn1b ENSDARG00000033655 9491 2.699 0.925 - - - - 0.856 0.918 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
62. pnoca ENSDARG00000025024 467 2.695 0.932 - - - - 0.781 0.982 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
63. olfm1b ENSDARG00000014053 1392 2.694 0.814 - - - - 0.931 0.949 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
64. SV2B SV2B 208 2.692 0.832 - - - - 0.897 0.963 - -
65. EPB41L1 EPB41L1 1896 2.692 0.858 - - - - 0.857 0.977 - -
66. lrrc4.1 ENSDARG00000069402 323 2.69 0.779 - - - - 0.955 0.956 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
67. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.686 0.815 - - - - 0.899 0.972 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
68. dpysl5a ENSDARG00000011141 1827 2.685 0.810 - - - - 0.908 0.967 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
69. stmn2b ENSDARG00000070537 1586 2.685 0.863 - - - - 0.949 0.873 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
70. sez6l2 ENSDARG00000076052 360 2.677 0.834 - - - - 0.916 0.927 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
71. necap1 ENSDARG00000020798 612 2.675 0.866 - - - - 0.920 0.889 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
72. nell2b ENSDARG00000062797 854 2.67 0.811 - - - - 0.886 0.973 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
73. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.67 0.925 - - - - 0.844 0.901 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
74. stxbp1a ENSDARG00000001994 5154 2.669 - 0.822 - - - 0.919 0.928 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
75. mapk12b ENSDARG00000006409 2246 2.666 0.933 - - - - 0.807 0.926 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
76. SPOCK1 ENSDARG00000074644 794 2.664 0.832 - - - - 0.914 0.918 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
77. lhfpl4a ENSDARG00000111810 206 2.662 0.839 - - 0.874 - - 0.949 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
78. nova1 ENSDARG00000020178 4129 2.661 - 0.736 - - - 0.943 0.982 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
79. plp1a ENSDARG00000103732 3544 2.65 0.951 - - - - 0.824 0.875 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
80. pcdh1gc5 ENSDARG00000104826 10052 2.644 0.822 - - - - 0.929 0.893 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
81. slc1a3a ENSDARG00000104431 9888 2.642 0.905 - - - - 0.942 0.795 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
82. syt4 ENSDARG00000036505 421 2.64 0.907 - - - - 0.771 0.962 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
83. CABZ01111990.1 CABZ01111990.1 4374 2.639 0.877 - - - - 0.825 0.937 - -
84. dnajc5aa ENSDARG00000042948 2885 2.637 0.812 - - - - 0.908 0.917 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
85. INA INA 950 2.636 0.713 - - - - 0.937 0.986 - -
86. snap25b ENSDARG00000058117 469 2.635 0.846 - - - - 0.885 0.904 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
87. atp6v0cb ENSDARG00000036577 3472 2.632 0.786 - - - - 0.916 0.930 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
88. epha4b ENSDARG00000011600 3110 2.631 0.851 - - - - 0.869 0.911 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
89. sncgb ENSDARG00000109715 1014 2.631 0.703 - - - - 0.950 0.978 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
90. gng3 ENSDARG00000009553 2530 2.631 0.842 - - - - 0.841 0.948 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
91. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.629 0.769 - - - - 0.894 0.966 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
92. syngr3a ENSDARG00000014871 405 2.629 0.947 - - - - 0.801 0.881 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
93. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.627 0.738 - - - - 0.933 0.956 - -
94. slc8a2b ENSDARG00000100592 598 2.623 0.821 - - - - 0.841 0.961 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
95. dtnbp1b ENSDARG00000055206 64 2.616 0.812 - - - - 0.833 0.971 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
96. ZFHX3 ENSDARG00000103057 7759 2.607 0.842 - - - - 0.860 0.905 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
97. celf4 ENSDARG00000070045 1537 2.606 0.948 - - - - 0.759 0.899 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
98. tox ENSDARG00000032317 9126 2.605 0.855 - - - - 0.843 0.907 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
99. mdkb ENSDARG00000020708 5393 2.603 0.902 - - - - 0.884 0.817 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
100. AGO1 ENSDARG00000092644 4521 2.598 0.887 - - - - 0.818 0.893 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]

There are 2128 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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