Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn8aa

Gene Name Gene ID Reads Annotation
scn8aa ENSDARG00000005775 792 sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]










Genes with expression patterns similar to scn8aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn8aa ENSDARG00000005775 792 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
2. stx1b ENSDARG00000000503 2724 3.841 0.931 0.978 - - - 0.971 0.961 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
3. slc1a2b ENSDARG00000102453 3136 3.708 0.940 0.814 - - - 0.983 0.971 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
4. MAP1A MAP1A 847 3.702 0.976 0.823 - - - 0.943 0.960 - -
5. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.679 0.905 0.906 - - - 0.929 0.939 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
6. snap25a ENSDARG00000020609 4537 3.667 0.929 0.859 - - - 0.967 0.912 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
7. rbfox3 rbfox3 1443 3.659 0.860 0.865 - - - 0.953 0.981 - -
8. pcsk1nl ENSDARG00000076170 1232 3.658 0.898 0.996 - - - 0.881 0.883 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
9. stmn2b ENSDARG00000070537 1586 3.653 0.945 0.772 - - - 0.990 0.946 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
10. TUSC5 TUSC5 1436 3.639 0.895 0.889 - - - 0.885 0.970 - -
11. TUBB8P7_1 TUBB8P7_1 2722 3.636 0.968 0.842 - - - 0.976 0.850 - -
12. nadl1.1 1200 3.635 0.877 0.959 - - - 0.930 0.869 - - neural adhesion molecule L1.1, transcript variant X1
13. syt11a ENSDARG00000057913 1145 3.632 0.933 0.937 - - - 0.906 0.856 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
14. stmn2a ENSDARG00000033234 2272 3.632 0.941 0.854 - - - 0.895 0.942 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
15. slc32a1 ENSDARG00000059775 1092 3.611 0.790 0.927 - - - 0.933 0.961 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
16. amph ENSDARG00000007663 599 3.61 0.882 0.876 - - - 0.868 0.984 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
17. gap43 ENSDARG00000099744 4114 3.607 0.923 0.795 - - - 0.962 0.927 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
18. scrt2 ENSDARG00000056175 4331 3.573 0.790 0.859 - - - 0.935 0.989 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
19. SKOR2 SKOR2 1041 3.563 0.937 0.853 - - - 0.798 0.975 - -
20. cadm3 ENSDARG00000057013 1545 3.561 0.885 0.778 - - - 0.981 0.917 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
21. CHL1 CHL1 1553 3.538 0.715 0.986 - - - 0.899 0.938 - -
22. gng3 ENSDARG00000009553 2530 3.534 0.899 0.884 - - - 0.832 0.919 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
23. nova2 ENSDARG00000017673 7685 3.533 0.776 0.889 - - - 0.944 0.924 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
24. dpysl3 ENSDARG00000002587 4381 3.528 0.899 0.729 - - - 0.972 0.928 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
25. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.522 0.850 0.745 - - - 0.947 0.980 - -
26. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.521 0.875 0.921 - - - 0.812 0.913 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
27. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.52 0.943 0.808 - - - 0.836 0.933 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
28. myt1b ENSDARG00000102879 5411 3.507 0.771 0.855 - - - 0.924 0.957 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
29. rtn1b ENSDARG00000021143 1682 3.504 0.901 0.838 - - - 0.921 0.844 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
30. scn2b ENSDARG00000101713 796 3.497 0.881 0.876 - - - 0.842 0.898 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
31. dbx2 2971 3.497 0.869 0.802 - - - 0.881 0.945 - - developing brain homeobox 2
32. si:ch211-152f6.6 si:ch211-152f6.6 278 3.493 0.922 0.867 - - - 0.751 0.953 - -
33. SV2B SV2B 208 3.492 0.880 0.876 - - - 0.861 0.875 - -
34. slc1a3a ENSDARG00000104431 9888 3.476 0.880 0.755 - - - 0.966 0.875 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
35. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.475 0.846 - - 0.728 - 0.952 0.949 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
36. pcdh1gc5 ENSDARG00000104826 10052 3.469 0.823 0.808 - - - 0.950 0.888 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
37. vsnl1a ENSDARG00000023228 1584 3.468 0.715 0.963 - - - 0.935 0.855 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
38. slc18a3a ENSDARG00000006356 1285 3.467 0.708 0.908 - - - 0.915 0.936 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
39. nrn1a ENSDARG00000071860 1311 3.466 0.908 0.747 - - - 0.925 0.886 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
40. syngr3a ENSDARG00000014871 405 3.462 0.896 0.785 - - - 0.846 0.935 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
41. BX957337.1 BX957337.1 1685 3.459 0.868 0.728 - - - 0.912 0.951 - -
42. atp2b3b ENSDARG00000023445 1424 3.448 0.890 0.890 - - - 0.874 0.794 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
43. adam23a ENSDARG00000062323 580 3.442 0.803 0.928 - - - 0.915 0.796 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
44. calb1 ENSDARG00000031598 252 3.438 0.935 0.754 - - - 0.867 0.882 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
45. si:ch73-21g5.7 ENSDARG00000093156 9412 3.436 0.773 0.898 - - - 0.822 0.943 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
46. syt4 ENSDARG00000036505 421 3.418 0.921 0.799 - - - 0.777 0.921 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
47. zic4 ENSDARG00000031307 1228 3.402 0.817 0.891 - - - 0.949 0.745 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
48. jag1a ENSDARG00000030289 1275 3.397 0.817 0.846 - - - 0.808 0.926 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
49. cers6 ENSDARG00000053583 247 3.395 0.813 0.844 - - - 0.869 0.869 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
50. mapk12b ENSDARG00000006409 2246 3.38 0.724 0.880 - - - 0.820 0.956 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
51. lhx1a ENSDARG00000014018 958 3.376 0.814 0.744 - - - 0.907 0.911 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
52. cnrip1a ENSDARG00000091683 1491 3.362 0.757 0.883 - - - 0.763 0.959 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
53. nes ENSDARG00000088805 2710 3.354 0.727 0.864 - - - 0.897 0.866 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
54. kcnc3a ENSDARG00000055855 1821 3.352 0.707 0.730 - - - 0.967 0.948 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
55. GJD2_1 GJD2_1 3045 3.341 0.839 0.754 - - - 0.784 0.964 - -
56. slc8a2b ENSDARG00000100592 598 3.339 0.809 0.703 - - - 0.860 0.967 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
57. MAP6 MAP6 643 3.329 0.855 0.904 - - - 0.721 0.849 - -
58. neurog1 ENSDARG00000056130 3924 3.303 0.745 0.776 - - - 0.843 0.939 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
59. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.297 0.884 0.844 - - - 0.740 0.829 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
60. zic1 ENSDARG00000015567 2520 3.272 0.896 0.713 - - - 0.838 0.825 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
61. sez6l2 ENSDARG00000076052 360 3.271 0.713 0.746 - - - 0.907 0.905 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
62. pax3a ENSDARG00000010192 626 3.258 0.724 0.732 - - - 0.892 0.910 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
63. map1aa ENSDARG00000059601 599 3.257 0.825 - - 0.706 - 0.880 0.846 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
64. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.243 0.815 0.742 - - - 0.908 0.778 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
65. rap2ip rap2ip 681 3.237 0.760 0.746 - - - 0.887 0.844 - -
66. nptx1l ENSDARG00000074671 569 3.218 0.796 0.815 - - - 0.802 0.805 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
67. cacng3b ENSDARG00000076401 91 3.196 0.880 0.754 - - - 0.739 0.823 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
68. lgi1a ENSDARG00000020493 1218 3.193 0.791 0.801 - - - 0.893 0.708 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
69. lgi2a ENSDARG00000111069 965 3.178 0.820 0.776 - - - 0.818 - 0.764 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
70. penka ENSDARG00000004869 161 3.138 0.854 0.767 - - - 0.782 0.735 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
71. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.986 0.768 0.713 - - - 0.721 0.784 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
72. rusc1 ENSDARG00000078125 617 2.868 0.953 - - - - 0.968 0.947 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
73. SNAP91 ENSDARG00000098809 556 2.84 - 0.971 - - - 0.946 0.923 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
74. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.814 0.953 - - - - 0.949 0.912 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
75. TUBB8P7 TUBB8P7 1353 2.812 0.962 0.914 - - - 0.936 - - -
76. tuba1c ENSDARG00000055216 8384 2.799 0.871 - - - - 0.986 0.942 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
77. cdk5r1b ENSDARG00000045087 2075 2.794 0.916 - - - - 0.965 0.913 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
78. fez1 ENSDARG00000023174 701 2.792 0.969 - - - - 0.847 0.976 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
79. INA INA 950 2.785 0.850 - - - - 0.969 0.966 - -
80. olfm1b ENSDARG00000014053 1392 2.785 0.889 - - - - 0.943 0.953 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
81. snap25b ENSDARG00000058117 469 2.782 0.862 - - - - 0.935 0.985 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
82. nova1 ENSDARG00000020178 4129 2.771 - 0.804 - - - 0.981 0.986 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
83. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.768 0.893 - - - - 0.900 0.975 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
84. sncgb ENSDARG00000109715 1014 2.766 0.894 - - - - 0.955 0.917 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
85. atp1a3a ENSDARG00000018259 5393 2.766 0.900 0.925 - - - 0.941 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
86. SPOCK1 ENSDARG00000074644 794 2.76 0.882 - - - - 0.957 0.921 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
87. ndrg4 ENSDARG00000103937 1234 2.76 0.875 - - - - 0.935 0.950 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
88. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.759 0.854 - - - - 0.937 0.968 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
89. mllt11 ENSDARG00000071026 2518 2.758 0.936 - - - - 0.962 0.860 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
90. adam11 ENSDARG00000079204 298 2.757 0.873 - - - - 0.916 0.968 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
91. sypb ENSDARG00000002230 262 2.755 0.910 - - - - 0.863 0.982 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
92. rab3ab ENSDARG00000043835 1267 2.753 0.867 - - - - 0.951 0.935 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
93. gsx1 ENSDARG00000035735 1243 2.748 0.827 - - - - 0.960 0.961 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
94. pou4f1 ENSDARG00000005559 821 2.746 0.914 - - - - 0.929 0.903 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
95. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.742 0.924 - - - - 0.942 0.876 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
96. atp6v0cb ENSDARG00000036577 3472 2.737 0.859 - - - - 0.934 0.944 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
97. dnajc5aa ENSDARG00000042948 2885 2.735 0.840 - - - - 0.948 0.947 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
98. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.725 - 0.821 - - - 0.924 0.980 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
99. nbeaa ENSDARG00000070080 862 2.723 0.811 - - - - 0.926 0.986 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
100. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.722 - 0.886 - - - 0.933 0.903 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]

There are 2513 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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