Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn4bb

Gene Name Gene ID Reads Annotation
scn4bb ENSDARG00000060319, ENSDARG00000112427 63 sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]










Genes with expression patterns similar to scn4bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
2. KLHL38 KLHL38 15 1.902 1.000 - - - 0.902 - - - -
3. GLB1L2 ENSDARG00000034941 74 1.865 1.000 0.865 - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
4. cyb561 ENSDARG00000038176 55 1.863 1.000 0.863 - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
5. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.816 1.000 0.816 - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
6. URB1 ENSDARG00000060308 78 1.799 1.000 - 0.799 - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
7. si:dkeyp-59c12.1 ENSDARG00000038112 186 1.764 1.000 0.764 - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
8. BX088525.2 ENSDARG00000117222 11 1.757 1.000 - - 0.757 - - - - -
9. aqp3b ENSDARG00000069518 80 1.72 1.000 - - 0.720 - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
10. epb41l3b ENSDARG00000019917 9 1.705 1.000 - - - - - - 0.705 - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
11. si:dkey-199m13.9 si:dkey-199m13.9 20 1.703 - 0.816 - - 0.887 - - - -
12. si:ch73-299h12.1 ENSDARG00000102321 233 1.702 1.000 0.702 - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
13. tecta ENSDARG00000059558 15 1.697 - - 0.770 - 0.927 - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
14. galnt14 ENSDARG00000023448 102 1.681 0.881 - - - 0.800 - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
15. serpine3 ENSDARG00000057108 49 1.666 0.825 - 0.841 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
16. si:dkey-29d8.3 ENSDARG00000091879 21 1.66 - 0.816 - - 0.844 - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
17. FGD5_1 FGD5_1 8 1.655 - 0.816 0.839 - - - - - -
18. aarsd1 ENSDARG00000015747 145 1.611 - 0.732 - - - 0.879 - - - alanyl-tRNA synthetase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-91]
19. pgap1 ENSDARG00000062465 30 1.607 - 0.816 - - 0.791 - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
20. xirp2b ENSDARG00000091090 759 1.605 - 0.827 - - - - 0.778 - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
21. fuom ENSDARG00000039422 82 1.55 - 0.752 0.798 - - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
22. COX5B ENSDARG00000015978 70 1.546 - 0.816 - - 0.730 - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
23. CDH16 ENSDARG00000077570 78 1.532 - - - - 0.819 0.713 - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
24. si:dkey-4c15.18 si:dkey-4c15.18 54 1.531 - 0.824 0.707 - - - - - -
25. si:dkey-270b7.4 si:dkey-270b7.4 11 1.521 - 0.816 - - - - - 0.705 -
26. MYL4 ENSDARG00000011519 309 1.504 - - 0.794 - - - 0.710 - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
27. zgc:112038 ENSDARG00000046140 73 1.498 0.746 - - - - 0.752 - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
28. rap2ab ENSDARG00000040246 63 1.491 0.746 0.745 - - - - - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. uncx4.1 ENSDARG00000037760 472 1.479 - 0.774 - - - - 0.705 - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
30. GTPBP8 ENSDARG00000075033 231 1.463 - 0.753 - - - 0.710 - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
31. sox18 ENSDARG00000058598 678 1.462 0.721 - - - - - 0.741 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
32. DUSP13_1 DUSP13_1 425 1.449 - 0.744 - - - - 0.705 - -
33. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
34. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
35. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
36. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
37. zap70 ENSDARG00000015752 1 1 1.000 - - - - - - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
38. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
39. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
40. brpf3 brpf3 15 1 1.000 - - - - - - - -
41. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
42. si:dkey-47k16.3 si:dkey-47k16.3 17 1 1.000 - - - - - - - -
43. si:ch211-10p21.1 si:ch211-10p21.1 6 1 1.000 - - - - - - - -
44. col28a1 col28a1 5 1 1.000 - - - - - - - -
45. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
46. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
47. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
48. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
49. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
50. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
51. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
52. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
53. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
54. flnb ENSDARG00000092281 10 1 1.000 - - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
55. si:ch73-381f5.2 ENSDARG00000092723 1 1 1.000 - - - - - - - - si:ch73-381f5.2 [Source:ZFIN;Acc:ZDB-GENE-090311-25]
56. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
57. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
58. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
59. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
60. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
61. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
62. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
63. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
64. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
65. CU694374.3 CU694374.3 28 1 1.000 - - - - - - - -
66. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
67. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
68. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
69. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
70. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
71. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
72. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
73. fermt3a fermt3a 56 1 1.000 - - - - - - - -
74. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
75. PLEKHS1 ENSDARG00000079227 7 1 1.000 - - - - - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
76. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
77. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
78. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
79. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
80. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
81. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
82. si:dkey-189d19.1 si:dkey-189d19.1 2 1 1.000 - - - - - - - -
83. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
84. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 1.000 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
85. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
86. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
87. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
88. arl11l arl11l 31 1 1.000 - - - - - - - -
89. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
90. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
91. or115-14 ENSDARG00000094235 17 1 1.000 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
92. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
93. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
94. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
95. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
96. BX119963.1 ENSDARG00000096135 28 1 1.000 - - - - - - - -
97. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
98. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
99. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
100. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -

There are 939 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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