Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn4bb

Gene Name Gene ID Reads Annotation
scn4bb ENSDARG00000060319, ENSDARG00000112427 63 sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]










Genes with expression patterns similar to scn4bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
2. KLHL38 KLHL38 15 1.902 1.000 - - - 0.902 - - - -
3. GLB1L2 ENSDARG00000034941 74 1.865 1.000 0.865 - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
4. cyb561 ENSDARG00000038176 55 1.863 1.000 0.863 - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
5. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.816 1.000 0.816 - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
6. URB1 ENSDARG00000060308 78 1.799 1.000 - 0.799 - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
7. si:dkeyp-59c12.1 ENSDARG00000038112 186 1.764 1.000 0.764 - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
8. BX088525.2 ENSDARG00000117222 11 1.757 1.000 - - 0.757 - - - - -
9. aqp3b ENSDARG00000069518 80 1.72 1.000 - - 0.720 - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
10. epb41l3b ENSDARG00000019917 9 1.705 1.000 - - - - - - 0.705 - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
11. si:dkey-199m13.9 si:dkey-199m13.9 20 1.703 - 0.816 - - 0.887 - - - -
12. si:ch73-299h12.1 ENSDARG00000102321 233 1.702 1.000 0.702 - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
13. tecta ENSDARG00000059558 15 1.697 - - 0.770 - 0.927 - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
14. galnt14 ENSDARG00000023448 102 1.681 0.881 - - - 0.800 - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
15. serpine3 ENSDARG00000057108 49 1.666 0.825 - 0.841 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
16. si:dkey-29d8.3 ENSDARG00000091879 21 1.66 - 0.816 - - 0.844 - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
17. FGD5_1 FGD5_1 8 1.655 - 0.816 0.839 - - - - - -
18. aarsd1 ENSDARG00000015747 145 1.611 - 0.732 - - - 0.879 - - - alanyl-tRNA synthetase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-91]
19. pgap1 ENSDARG00000062465 30 1.607 - 0.816 - - 0.791 - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
20. xirp2b ENSDARG00000091090 759 1.605 - 0.827 - - - - 0.778 - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
21. fuom ENSDARG00000039422 82 1.55 - 0.752 0.798 - - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
22. COX5B ENSDARG00000015978 70 1.546 - 0.816 - - 0.730 - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
23. CDH16 ENSDARG00000077570 78 1.532 - - - - 0.819 0.713 - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
24. si:dkey-4c15.18 si:dkey-4c15.18 54 1.531 - 0.824 0.707 - - - - - -
25. si:dkey-270b7.4 si:dkey-270b7.4 11 1.521 - 0.816 - - - - - 0.705 -
26. MYL4 ENSDARG00000011519 309 1.504 - - 0.794 - - - 0.710 - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
27. zgc:112038 ENSDARG00000046140 73 1.498 0.746 - - - - 0.752 - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
28. rap2ab ENSDARG00000040246 63 1.491 0.746 0.745 - - - - - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. uncx4.1 ENSDARG00000037760 472 1.479 - 0.774 - - - - 0.705 - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
30. GTPBP8 ENSDARG00000075033 231 1.463 - 0.753 - - - 0.710 - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
31. sox18 ENSDARG00000058598 678 1.462 0.721 - - - - - 0.741 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
32. DUSP13_1 DUSP13_1 425 1.449 - 0.744 - - - - 0.705 - -
33. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
34. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
35. irgq2 ENSDARG00000068657 4 1 1.000 - - - - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
36. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
37. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
38. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
39. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
40. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
41. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
42. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
43. BX119963.1 ENSDARG00000096135 28 1 1.000 - - - - - - - -
44. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
45. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
46. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
47. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
48. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
49. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
50. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
51. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
52. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
53. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
54. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
55. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
56. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
57. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 1.000 - - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
58. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
59. vipr1b ENSDARG00000059058 62 1 1.000 - - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
60. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
61. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
62. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
63. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
64. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
65. CABZ01006254.1 CABZ01006254.1 95 1 1.000 - - - - - - - -
66. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
67. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
68. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
69. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
70. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
71. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
72. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
73. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
74. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
75. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
76. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
77. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
78. CABZ01078481.1 CABZ01078481.1 6 1 1.000 - - - - - - - -
79. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
80. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
81. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
82. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
83. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
84. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
85. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
86. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
87. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
88. si:dkey-85n7.8 ENSDARG00000095793 31 1 1.000 - - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
89. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
90. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
91. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
92. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
93. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
94. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
95. FAM196B FAM196B 1 1 1.000 - - - - - - - -
96. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
97. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
98. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
99. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
100. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]

There are 939 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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