Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scn4ba

Gene Name Gene ID Reads Annotation
scn4ba ENSDARG00000099031 1634 sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]










Genes with expression patterns similar to scn4ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn4ba ENSDARG00000099031 1634 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
2. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 2.509 - 0.862 - - - 0.821 0.826 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
3. mafa ENSDARG00000015890 2140 2.494 - - - - - 0.870 0.912 0.712 - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
4. PTPLA PTPLA 4044 2.473 - - - - - 0.908 0.819 - 0.746
5. myom1a ENSDARG00000061249 10230 2.426 - - - - - 0.852 0.865 0.709 - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
6. nexn ENSDARG00000057317 10972 2.419 - - - - - 0.879 0.835 - 0.705 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
7. myod1 ENSDARG00000030110 6019 2.411 - - - - - 0.824 0.830 - 0.757 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
8. si:ch211-255p10.3 ENSDARG00000096616 8336 2.408 - - - - - 0.900 0.747 - 0.761 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
9. klhl41b ENSDARG00000006757 10762 2.38 - - - - - 0.872 0.804 - 0.704 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
10. ryr3 ENSDARG00000071331 6795 2.368 - - - - - 0.721 0.866 - 0.781 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
11. trdn ENSDARG00000041779 4283 2.362 - - - - - 0.779 0.801 - 0.782 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
12. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.34 0.815 - - - - 0.741 0.784 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
13. agla ENSDARG00000103811 2856 2.328 - - - - - 0.719 0.860 0.749 - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
14. MYOM1 MYOM1 3870 2.321 - - - - - - 0.793 0.808 0.720
15. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.31 0.704 - - - - 0.782 0.824 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
16. C13H10orf71 3489 2.31 - - - - - - 0.822 0.720 0.768 chromosome 13 C10orf71 homolog
17. dhrs7c dhrs7c 1173 2.284 - - - - - 0.773 0.808 0.703 -
18. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.268 - - - - - 0.702 0.752 - 0.814 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
19. map7d2a ENSDARG00000068480 513 2.263 0.808 - - - - 0.742 0.713 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
20. smyd1a ENSDARG00000009280 1503 2.251 - - - - - 0.745 0.804 0.702 - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
21. sptb ENSDARG00000030490 7128 2.236 - - - - - 0.737 0.786 - 0.713 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
22. tnnt2d ENSDARG00000002988 7590 2.222 - - - - - 0.710 0.800 - 0.712 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
23. zgc:136930 ENSDARG00000055192 1208 2.17 - - 0.705 - - 0.713 0.752 - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
24. rtn1b ENSDARG00000021143 1682 2.153 0.704 - - - - 0.708 0.741 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
25. ylpm1 ENSDARG00000043680 7676 2.144 0.710 - - - - 0.704 0.730 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
26. iqsec3b ENSDARG00000093091 10 1.812 0.836 0.976 - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
27. asic1b ENSDARG00000101866 61 1.812 0.836 0.976 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
28. C2CD3 ENSDARG00000074137 51 1.785 0.809 0.976 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
29. nadl1.2 695 1.776 0.808 0.968 - - - - - - - neural adhesion molecule L1.2, transcript variant X1
30. atp1b3b ENSDARG00000042837 5163 1.768 - - - - - 0.890 0.878 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
31. tmem47 ENSDARG00000057322 4691 1.766 - - - - - 0.868 0.898 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
32. CABZ01021433.1 ENSDARG00000105696 74 1.765 0.836 0.929 - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
33. adcyap1b ENSDARG00000027740 1539 1.76 0.883 0.877 - - - - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
34. camk2d2 ENSDARG00000014273 2840 1.751 - - - - - 0.861 0.890 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
35. nr1d4b ENSDARG00000059370 243 1.74 0.762 0.978 - - - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
36. tmem182 tmem182 12589 1.732 - - - - - 0.917 0.815 - -
37. gabra5 ENSDARG00000070730 156 1.731 0.755 0.976 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
38. C7H4orf48 C7H4orf48 1455 1.729 0.811 0.918 - - - - - - -
39. GPR158 GPR158 64 1.729 0.765 0.964 - - - - - - -
40. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.722 - - - - - 0.909 0.813 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
41. lmx1bb ENSDARG00000068365 627 1.717 0.754 0.963 - - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
42. chrna1 ENSDARG00000009021 2931 1.706 - - - - - 0.858 0.848 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
43. tprg1l ENSDARG00000068149 1605 1.706 - - - - - 0.837 0.869 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
44. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.7 - - - - - 0.869 0.831 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
45. flncb ENSDARG00000018820 5595 1.69 - - - - - 0.809 0.881 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
46. KIF1A KIF1A 1686 1.689 0.770 0.919 - - - - - - -
47. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.687 - - - - - 0.788 0.899 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
48. SPAG5 SPAG5 1117 1.686 - 0.886 - - - - 0.800 - -
49. scrt1a ENSDARG00000100821 2687 1.686 0.759 0.927 - - - - - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
50. itga10 ENSDARG00000002507 158 1.681 - 0.890 - - - - 0.791 - - integrin, alpha 10 [Source:ZFIN;Acc:ZDB-GENE-100922-54]
51. adam11 ENSDARG00000079204 298 1.678 0.794 0.884 - - - - - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
52. trim44 ENSDARG00000051761 509 1.664 - 0.891 - - - - 0.773 - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
53. INA INA 950 1.662 0.700 0.962 - - - - - - -
54. ank2b ENSDARG00000043313 3065 1.661 - - - - - 0.772 0.889 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
55. si:ch211-219a4.3 ENSDARG00000040445 120 1.661 - 0.953 - - 0.708 - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
56. cdk5r1b ENSDARG00000045087 2075 1.659 0.905 0.754 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
57. sms ENSDARG00000008155 1192 1.659 - - - - - 0.805 0.854 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
58. clvs2 ENSDARG00000053122 1390 1.659 0.718 0.941 - - - - - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
59. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.658 - - - - - 0.823 0.835 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
60. NRAP ENSDARG00000009341 3565 1.656 - - - - - 0.855 0.801 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
61. ctnna2 ENSDARG00000024785 968 1.655 - - - - - 0.782 0.873 - - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
62. hif1an ENSDARG00000031915 2098 1.654 - - - - - 0.773 0.881 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
63. myoz2a ENSDARG00000012311 1373 1.653 - - - - - 0.764 0.889 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
64. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.651 - - - - - 0.846 0.805 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
65. DNAJA4 ENSDARG00000051762 5657 1.649 - - - - - 0.824 0.825 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
66. hspb9 ENSDARG00000078674 2755 1.649 - - - - - 0.792 0.857 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
67. PRIMA1 PRIMA1 459 1.648 - - - - - 0.810 0.838 - -
68. NAT16 ENSDARG00000086222 4682 1.639 - - - - - 0.856 0.783 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
69. CNTNAP2A ENSDARG00000058969 97 1.634 - 0.914 - - - - 0.720 - - contactin associated protein like 2a [Source:ZFIN;Acc:ZDB-GENE-120328-3]
70. tmsb ENSDARG00000054911 6411 1.634 - - - - - 0.775 0.859 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
71. txnipb ENSDARG00000070000 2365 1.633 - - - - - 0.825 0.808 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
72. SV2A ENSDARG00000059945 1278 1.633 0.878 0.755 - - - - - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
73. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.628 - 0.828 - - - - 0.800 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
74. klhl40a ENSDARG00000039052 2537 1.625 - - - - - 0.841 0.784 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
75. ryr1b ENSDARG00000023797 5693 1.625 - - - - - - 0.847 - 0.778 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
76. TRIM63 TRIM63 1600 1.622 - - - - - 0.806 0.816 - -
77. PTP4A3 ENSDARG00000039997 3814 1.621 - - - - - 0.781 0.840 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
78. osbpl2a ENSDARG00000053804 1883 1.621 - - - - - 0.877 0.744 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
79. ugt5g1 ENSDARG00000032862, ENSDARG00000111242 222 1.617 - - - - 0.806 - 0.811 - - UDP glucuronosyltransferase 5 family, polypeptide G1 [Source:ZFIN;Acc:ZDB-GENE-080305-10]
80. ALDH1L2 ENSDARG00000070230 2550 1.615 - - - - - 0.827 0.788 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
81. trim63 trim63 2437 1.615 - - - - - 0.820 0.795 - -
82. stac3 ENSDARG00000098883 1765 1.614 - - - - - 0.795 0.819 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
83. phex ENSDARG00000062363 1413 1.613 - - - - - 0.810 0.803 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
84. sox6 ENSDARG00000015536 7728 1.613 - - - - - 0.726 0.887 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
85. tdh ENSDARG00000002745 5344 1.609 - - - - - 0.815 0.794 - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
86. slc16a3 ENSDARG00000045051 818 1.606 - - - - - 0.750 0.856 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
87. CR354540.2 ENSDARG00000117517 18452 1.606 - - - - - - 0.828 - 0.778
88. cap2 ENSDARG00000104478 3266 1.606 - - - - - 0.786 0.820 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
89. rp42-pen rp42-pen 3395 1.606 - - - - - 0.813 0.793 - -
90. kbtbd12 ENSDARG00000001882 1196 1.605 - - - - - 0.807 0.798 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
91. ank3b ENSDARG00000077582, ENSDARG00000110151 831 1.604 - - - - - 0.774 0.830 - - ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]
92. jph1a ENSDARG00000058603 2852 1.598 - - - - - - 0.856 - 0.742 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
93. zic2a ENSDARG00000015554 2860 1.597 0.816 - - - - - 0.781 - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
94. CR847973.1 ENSDARG00000115516 8754 1.596 - - - - - 0.740 0.856 - -
95. pou4f2 ENSDARG00000069737 451 1.596 0.895 - - - - - 0.701 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
96. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.595 0.882 - - - - - 0.713 - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
97. sgcd ENSDARG00000098573 4980 1.594 - - - - - - 0.838 - 0.756 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
98. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.592 - - - - - 0.748 0.844 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
99. si:dkey-66n24.2 si:dkey-66n24.2 69 1.591 0.836 0.755 - - - - - - -
100. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.589 - - - - - - 0.828 - 0.761 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]

There are 2017 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA