Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn4ab

Gene Name Gene ID Reads Annotation
scn4ab ENSDARG00000034588 109 sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]










Genes with expression patterns similar to scn4ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn4ab ENSDARG00000034588 109 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
2. si:dkey-114c15.5 ENSDARG00000095150 70 1.644 0.748 - - - - - 0.896 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
3. zp3b ENSDARG00000039828 15 1.612 - 0.727 - - - - 0.885 - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
4. sim1a ENSDARG00000023316 190 1.557 - 0.820 - - - - 0.737 - - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
5. CR388042.1 ENSDARG00000106267 18 1.542 0.839 0.703 - - - - - - -
6. aasdh ENSDARG00000022730 13 1.516 - 0.727 - - 0.789 - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
7. klc4_1 ENSDARG00000086985 22 1.483 0.756 0.727 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
8. zp2.1 ENSDARG00000086352 41 1.475 0.756 - 0.719 - - - - - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
9. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.47 0.756 - - - 0.714 - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
10. si:ch211-42d10.5 si:ch211-42d10.5 17 1.461 - - - - - - 0.707 - 0.754
11. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.445 0.743 - - - - - 0.702 - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
12. RTKN_1 RTKN_1 176 1.426 0.721 - - - - - 0.705 - -
13. brwd3 ENSDARG00000035540 92 1.421 - 0.714 - - - - 0.707 - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
14. si:dkey-182g1.5 si:dkey-182g1.5 22 0.913 0.913 - - - - - - - -
15. CR848746.2 CR848746.2 69 0.913 0.913 - - - - - - - -
16. ighmbp2 ENSDARG00000069274, ENSDARG00000113605 60 0.911 0.911 - - - - - - - - immunoglobulin mu DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-258]
17. zgc:162913 zgc:162913 155 0.907 - 0.907 - - - - - - -
18. vipr1b ENSDARG00000059058 62 0.897 - - - - - - 0.897 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
19. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.896 - - - - - - 0.896 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
20. dph2 ENSDARG00000078077 36 0.896 - - - - - - 0.896 - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
21. CU655961.3 ENSDARG00000106724 14 0.896 - - - - - - 0.896 - -
22. tmem237a ENSDARG00000041735 13 0.896 - - - - - - 0.896 - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
23. CABZ01081748.1 ENSDARG00000102139 31 0.896 - - - - - - 0.896 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
24. si:rp71-45g20.6 si:rp71-45g20.6 19 0.896 - - - - - - 0.896 - -
25. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 0.896 - - - - - - 0.896 - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
26. CABZ01021426.1 CABZ01021426.1 25 0.885 - - - - - - 0.885 - -
27. meiob 75 0.885 - - - - - - 0.885 - - meiosis specific with OB domains
28. dachb ENSDARG00000034785, ENSDARG00000111845 109 0.884 - - - - - - 0.884 - - dachshund b [Source:ZFIN;Acc:ZDB-GENE-020402-4]
29. slco5a1 slco5a1 383 0.882 - - - - - - 0.882 - -
30. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 0.881 0.881 - - - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
31. grin2db ENSDARG00000070620 101 0.881 0.881 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
32. siae ENSDARG00000040527, ENSDARG00000111850 186 0.881 - 0.881 - - - - - - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
33. dbh ENSDARG00000069446, ENSDARG00000114942 60 0.881 0.881 - - - - - - - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
34. si:dkey-189d19.2 si:dkey-189d19.2 45 0.881 0.881 - - - - - - - -
35. COL26A1 COL26A1 9 0.881 0.881 - - - - - - - -
36. BX005423.3 BX005423.3 33 0.881 0.881 - - - - - - - -
37. tsga10 ENSDARG00000052512 79 0.877 - - - - - - 0.877 - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
38. E2F1 ENSDARG00000103868 638 0.875 - - - - - 0.875 - - - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
39. camk2b1 ENSDARG00000011065 79 0.869 0.869 - - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
40. ntf3 ENSDARG00000059043 355 0.869 0.869 - - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
41. sfrp1a ENSDARG00000035521 318 0.867 - - - - - - 0.867 - - secreted frizzled-related protein 1a [Source:ZFIN;Acc:ZDB-GENE-040310-5]
42. dcaf5 ENSDARG00000060320 163 0.864 - 0.864 - - - - - - - ddb1 and cul4 associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-060929-808]
43. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.863 - - - - - - 0.863 - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
44. taok2b_1 ENSDARG00000100620 2082 0.863 - 0.863 - - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
45. ZFHX2 2463 0.861 - 0.861 - - - - - - - zinc finger homeobox 2, transcript variant X2
46. pot1 ENSDARG00000079915 42 0.859 - - - - - - 0.859 - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
47. pnp4a ENSDARG00000057575 355 0.854 - - - - - - 0.854 - - purine nucleoside phosphorylase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-83]
48. col19a1 ENSDARG00000076163, ENSDARG00000096073 356 0.854 0.854 - - - - - - - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
49. galnt14 ENSDARG00000023448 102 0.854 - 0.854 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
50. cep57l1 ENSDARG00000002826 521 0.848 0.848 - - - - - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
51. ankmy1 ENSDARG00000062702 52 0.848 - - - - - - 0.848 - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
52. MYOCD 46 0.848 - - - - - - 0.848 - - myocardin, transcript variant X2
53. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 0.848 - - - - - - 0.848 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
54. PLXNB2 PLXNB2 99 0.846 - 0.846 - - - - - - -
55. CPNE7 ENSDARG00000102584 95 0.845 - - - - - - 0.845 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
56. CHST15 ENSDARG00000074527 210 0.844 - 0.844 - - - - - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
57. GP9 ENSDARG00000090638 53 0.843 - 0.843 - - - - - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
58. SNORA81 SNORA81 47 0.843 - 0.843 - - - - - - -
59. STK40 ENSDARG00000098135 2 0.843 - 0.843 - - - - - - - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
60. lmo1 ENSDARG00000034504 260 0.843 - 0.843 - - - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
61. tpd52l1 ENSDARG00000042548 61 0.843 - 0.843 - - - - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
62. rdh14a ENSDARG00000039299 79 0.843 - 0.843 - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
63. msh6 ENSDARG00000104541 197 0.842 - - - - - - 0.842 - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
64. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 0.84 - 0.840 - - - - - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
65. si:dkey-199i24.3 si:dkey-199i24.3 64 0.839 0.839 - - - - - - - -
66. si:ch211-32p8.2 si:ch211-32p8.2 25 0.838 - 0.838 - - - - - - -
67. BX465841.1 BX465841.1 47 0.837 - - - - - - 0.837 - -
68. gpx1b ENSDARG00000006207 67 0.836 - - - - - - 0.836 - - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
69. cpeb1b ENSDARG00000008454 37 0.833 - - - - - - 0.833 - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
70. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 0.831 - 0.831 - - - - - - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
71. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 0.831 - - - - - - 0.831 - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
72. CR854948.2 CR854948.2 4 0.831 - - - - - - 0.831 - -
73. st3gal4 ENSDARG00000041006 636 0.831 - 0.831 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
74. ttll10 ENSDARG00000090472 36 0.831 - - - - - - 0.831 - - tubulin tyrosine ligase-like family, member 10 [Source:ZFIN;Acc:ZDB-GENE-081104-350]
75. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.83 - 0.830 - - - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
76. haus3 ENSDARG00000061385, ENSDARG00000110959 343 0.83 - 0.830 - - - - - - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
77. slc5a3b ENSDARG00000077812 153 0.829 - - - - - - 0.829 - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
78. pcdh7b ENSDARG00000060610 400 0.825 - 0.825 - - - - - - - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
79. fgfrl1b ENSDARG00000052556, ENSDARG00000110034 240 0.825 - 0.825 - - - - - - - fibroblast growth factor receptor like 1b [Source:ZFIN;Acc:ZDB-GENE-050201-3]
80. GEMIN6 ENSDARG00000105394 130 0.823 - 0.823 - - - - - - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
81. ZNFX1 ENSDARG00000100280 118 0.821 - 0.821 - - - - - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
82. NUDT8 ENSDARG00000007722 329 0.821 - - - - - - 0.821 - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
83. c1ql3a ENSDARG00000010350 179 0.82 - 0.820 - - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
84. trmt44 ENSDARG00000033957 133 0.82 - 0.820 - - - - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
85. si:ch211-229l10.12 si:ch211-229l10.12 95 0.818 - - - - - - 0.818 - -
86. im:7154842 im:7154842 434 0.816 - 0.816 - - - - - - -
87. FCHSD2_1 FCHSD2_1 14 0.816 - 0.816 - - - - - - -
88. BICC1 BICC1 264 0.815 - 0.815 - - - - - - -
89. PSD PSD 367 0.814 - 0.814 - - - - - - -
90. zgc:113142 ENSDARG00000038969 74 0.814 - - - - - - 0.814 - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
91. zgc:171422 ENSDARG00000104715 255 0.814 - 0.814 - - - - - - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
92. dnajb9a ENSDARG00000052072 578 0.813 0.813 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
93. CT583626.2 CT583626.2 53 0.812 0.812 - - - - - - - -
94. ypel2a ENSDARG00000077224 242 0.812 - - - - - - 0.812 - - yippee-like 2a [Source:ZFIN;Acc:ZDB-GENE-091118-98]
95. tatdn3 ENSDARG00000054076 130 0.812 - - - - - - 0.812 - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
96. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 0.809 - 0.809 - - - - - - -
97. homer1b ENSDARG00000101759 341 0.808 - 0.808 - - - - - - - homer scaffold protein 1b [Source:ZFIN;Acc:ZDB-GENE-040801-44]
98. slc6a14 ENSDARG00000029866 61 0.807 - 0.807 - - - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
99. msto1 ENSDARG00000024381 298 0.807 - - - - - - 0.807 - - misato 1, mitochondrial distribution and morphology regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6238]
100. FAM109B FAM109B 470 0.807 0.807 - - - - - - - -

There are 618 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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