Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn4aa

Gene Name Gene ID Reads Annotation
scn4aa ENSDARG00000098738, ENSDARG00000113568 5 sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]










Genes with expression patterns similar to scn4aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 6 1.000 - 1.000 - 1.000 1.000 1.000 - 1.000 sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
2. PATL2 PATL2 10 2 - - - - 1.000 1.000 - - -
3. CR847893.4 CR847893.4 2 2 - - 1.000 - - 1.000 - - -
4. si:dkey-256e21.1 si:dkey-256e21.1 11 2 - - 1.000 - 1.000 - - - -
5. fam169b ENSDARG00000069321 5 2 - - - - - 1.000 - - 1.000 family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
6. viml ENSDARG00000044501 5 2 - - 1.000 - - 1.000 - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
7. CU468142.1 CU468142.1 6 2 - - - - - - 1.000 - 1.000
8. ZNF70 ZNF70 2 2 - - 1.000 - - - 1.000 - -
9. slc5a12 ENSDARG00000005004 15 1.977 0.977 - - - - 1.000 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
10. pdzd3a ENSDARG00000040568 2 1.974 - - - - 1.000 - - - 0.974 PDZ domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-080430-1]
11. BX470224.1 ENSDARG00000092793 22 1.9 - - - - 1.000 0.900 - - -
12. smad6b ENSDARG00000031763 12 1.88 - - 0.880 - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
13. DBNDD1 DBNDD1 43 1.854 - - - - - 0.854 1.000 - -
14. BX927369.3 BX927369.3 5 1.85 - - - - - - 0.850 - 1.000
15. TBC1D10C ENSDARG00000037408 18 1.806 - - - - 0.806 - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
16. FBXO16 ENSDARG00000033949 10 1.798 - - 1.000 - - - 0.798 - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
17. n6amt2 7 1.753 - - 1.000 - 0.753 - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
18. ftr43 ENSDARG00000076106 2 1.735 - - 0.735 - - - 1.000 - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
19. PRKCA ENSDARG00000099841 2 1.735 1.000 - 0.735 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
20. CU638737.1 CU638737.1 17 1.717 - - - - 1.000 - - - 0.717
21. SLC13A5 SLC13A5 31 1.705 0.863 - - - - 0.842 - - -
22. tnfsf10l3 ENSDARG00000032746 37 1.704 1.000 - - - - 0.704 - - - tumor necrosis factor (ligand) superfamily, member 10 like 3 [Source:ZFIN;Acc:ZDB-GENE-070606-1]
23. zgc:162402 zgc:162402 298 1.7 - - - - - 0.883 0.817 - -
24. SDR42E2 ENSDARG00000059914 132 1.696 0.787 - 0.909 - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
25. CU184832.2 CU184832.2 35 1.668 0.835 - - - - 0.833 - - -
26. klhl38 klhl38 44 1.574 0.762 - - - - 0.812 - - -
27. zgc:152977 ENSDARG00000077178 59 1.573 0.729 - - - - 0.844 - - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
28. C7H19orf12_1 C7H19orf12_1 20 1.5 - - - - 0.702 - 0.798 - -
29. med18 ENSDARG00000041237 247 1.471 0.711 - - - - - 0.760 - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
30. lypla1 ENSDARG00000104228 185 1.429 0.720 - - - - 0.709 - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
31. alox5 alox5 406 1 1.000 - - - - - - - -
32. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
33. CLPX CLPX 2 1 - - 1.000 - - - - - -
34. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
35. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
36. si:ch211-207m11.2 si:ch211-207m11.2 63 1 1.000 - - - - - - - -
37. zgc:112958 zgc:112958 5 1 - - - - 1.000 - - - -
38. zgc:56231 ENSDARG00000010332 0 1 - - - - - - 1.000 - - zgc:56231 [Source:ZFIN;Acc:ZDB-GENE-040426-1914]
39. zgc:194285 ENSDARG00000078423 27 1 1.000 - - - - - - - - zgc:194285 [Source:ZFIN;Acc:ZDB-GENE-081022-97]
40. wu:fe38f03 wu:fe38f03 22 1 - - - - - - 1.000 - -
41. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
42. grtp1b ENSDARG00000030269 24 1 1.000 - - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
43. TRPC4_1 TRPC4_1 212 1 - - - - - - 1.000 - -
44. pcdh2g8 2 1 - - - - - - 1.000 - - protocadherin 2 gamma 8
45. nphs2 ENSDARG00000042850 31 1 - - - - 1.000 - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
46. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
47. kif20a ENSDARG00000044491 12 1 - - - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
48. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
49. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
50. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
51. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
52. ovca2 ENSDARG00000103748 38 1 - - - - - 1.000 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
53. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
54. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
55. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - - 1.000 - - - -
56. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
57. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 - - - - 1.000 - - - -
58. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1 - - - - - 1.000 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
59. zzef1 ENSDARG00000094380 4 1 - - - - 1.000 - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
60. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
61. tbr1a ENSDARG00000076259 341 1 - - - - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
62. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
63. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
64. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
65. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
66. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
67. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
68. si:dkey-56d12.4 ENSDARG00000070845 2 1 - - - - 1.000 - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
69. pcdh2g12 5 1 1.000 - - - - - - - - protocadherin 2 gamma 12
70. irak1 ENSDARG00000025949 19 1 - - - - - - 1.000 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
71. si:rp71-10g3.1 si:rp71-10g3.1 6 1 - - - - 1.000 - - - -
72. FAM13C FAM13C 1 1 - - - - 1.000 - - - -
73. dkk2 ENSDARG00000076420 553 1 - - - - - 1.000 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
74. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
75. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - 1.000 - - - -
76. STYK1_1 STYK1_1 34 1 - - - - - - - - 1.000
77. CNGB3 CNGB3 7 1 1.000 - - - - - - - -
78. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - - - 1.000 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
79. BX323089.1 BX323089.1 0 1 - - - - - - 1.000 - -
80. notchl ENSDARG00000088308 28 1 - - - - - 1.000 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
81. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
82. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
83. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
84. BX936443.2 BX936443.2 28 1 - - - - - - 1.000 - -
85. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
86. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 1 1.000 - - - - - - - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
87. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
88. casd1 ENSDARG00000023900 12 1 1.000 - - - - - - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
89. kcnk2b ENSDARG00000007151 1 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 2b [Source:ZFIN;Acc:ZDB-GENE-051120-69]
90. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
91. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
92. BX897714.3 BX897714.3 3 1 - - - - 1.000 - - - -
93. meox2b ENSDARG00000061818, ENSDARG00000116206 62 1 1.000 - - - - - - - - mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853]
94. ENSDARG00000078787 ENSDARG00000078787 97 1 - - - - 1.000 - - - -
95. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
96. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
97. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1 - - - - - 1.000 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
98. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
99. si:ch211-133n4.11 ENSDARG00000094796 2 1 1.000 - - - - - - - - si:ch211-133n4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-124]
100. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -

There are 1129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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