Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scn3b

Gene Name Gene ID Reads Annotation
scn3b ENSDARG00000062359 242 sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]










Genes with expression patterns similar to scn3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn3b ENSDARG00000062359 242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
2. crot ENSDARG00000040352 701 1.843 0.855 0.988 - - - - - - - carnitine O-octanoyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-35]
3. ubn2 ubn2 534 1.832 0.833 0.999 - - - - - - -
4. HIST1H4J HIST1H4J 31 1.781 0.860 - - - - - 0.921 - -
5. smtla ENSDARG00000038191 42 1.768 0.879 - - - - - 0.889 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
6. tnfrsf19 ENSDARG00000041869 796 1.757 - 0.997 - - - - 0.760 - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
7. ZBTB8A ENSDARG00000059226 98 1.749 0.889 - - - - - 0.860 - - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
8. satb1a ENSDARG00000057649 250 1.745 - - - - - - 0.964 0.781 - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
9. tpi1a ENSDARG00000025012 562 1.739 0.739 1.000 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
10. wdr5 ENSDARG00000016903 4834 1.716 - 0.972 - - - - - 0.744 - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
11. ptprz1a ENSDARG00000051814 385 1.708 0.912 - - - - - 0.796 - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
12. scml4 ENSDARG00000017266 194 1.707 - - - - - - 0.900 0.807 - Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
13. pank1b ENSDARG00000010098 3202 1.691 0.706 0.985 - - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
14. dvl3a ENSDARG00000015707 1132 1.684 0.815 - - - - - 0.869 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
15. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.669 - - - - - - 0.882 0.787 - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
16. gng13b ENSDARG00000037921 215 1.659 0.823 - - - - - - 0.836 - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
17. cadpsa ENSDARG00000043661 160 1.641 - - - - - - 0.935 0.706 - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
18. C17H10orf137 C17H10orf137 273 1.628 0.816 - - - - - 0.812 - -
19. MIS12 ENSDARG00000026454 649 1.617 - - - - - - 0.840 0.777 - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
20. galnt8b galnt8b 77 1.612 0.879 - - - - - 0.733 - -
21. PARP8 ENSDARG00000059789 264 1.589 0.875 - - - - - - 0.714 - poly (ADP-ribose) polymerase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-060929-432]
22. AL954676.2 AL954676.2 50 1.583 - - - - - - 0.869 0.714 -
23. PLA2R1 ENSDARG00000077474 45 1.581 0.806 - - - - 0.775 - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
24. tmtc4 ENSDARG00000020447 873 1.566 0.770 - - - - - 0.796 - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
25. smad2 ENSDARG00000006389 646 1.565 0.710 - - - - - 0.855 - - SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
26. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.528 - - - - - - 0.712 0.816 - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
27. map4k2l map4k2l 248 1.497 0.784 - - - - - 0.713 - -
28. MICAL2 MICAL2 396 1.494 - - 0.786 - - - 0.708 - -
29. gc3 31 1.472 - - - - - 0.704 - 0.768 - guanylyl cyclase 3, transcript variant X2
30. cbwd ENSDARG00000004318, ENSDARG00000111371 626 1.445 - - - - - 0.705 0.740 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
31. mxra7 ENSDARG00000095300 332 1 - 1.000 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
32. mis18a ENSDARG00000035333 555 1 - 1.000 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
33. dhrs9 ENSDARG00000019260 250 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
34. SETDB2 ENSDARG00000101462 249 1 - 1.000 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
35. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 1 - 1.000 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
36. RCSD1 RCSD1 144 1 - 1.000 - - - - - - -
37. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 1 - 1.000 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
38. KLF8 ENSDARG00000060661 219 1 - 1.000 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
39. zgc:123295 ENSDARG00000056324 361 1 - 1.000 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
40. si:dkey-11e23.9 ENSDARG00000095586 114 1 - 1.000 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
41. sept8b ENSDARG00000014233 223 1 - 1.000 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
42. ppp1r14ba ENSDARG00000044541 792 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
43. prr12a ENSDARG00000074229 1668 0.999 - 0.999 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
44. ptk6a ENSDARG00000017947 682 0.999 - 0.999 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
45. acadsb ENSDARG00000076780 2382 0.999 - 0.999 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
46. slc31a2 ENSDARG00000076092 251 0.999 - 0.999 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
47. DUSP28 ENSDARG00000059695 1135 0.999 - 0.999 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
48. csrnp2 ENSDARG00000075972 1650 0.999 - 0.999 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
49. wipf1 wipf1 760 0.999 - 0.999 - - - - - - -
50. appl1 1019 0.999 - 0.999 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
51. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.998 - 0.998 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
52. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.998 - 0.998 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
53. ptpn9a ENSDARG00000077495 2295 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
54. pfkfb3 ENSDARG00000001953 656 0.998 - 0.998 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
55. cenpl ENSDARG00000038802 696 0.998 - 0.998 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
56. ptpn4b ENSDARG00000000183 425 0.998 - 0.998 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
57. arid1ab ENSDARG00000101891 1722 0.998 - 0.998 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
58. pip4k2aa ENSDARG00000003776 865 0.998 - 0.998 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
59. C25H1orf51 C25H1orf51 2460 0.997 - 0.997 - - - - - - -
60. im:7136729 im:7136729 1625 0.997 - 0.997 - - - - - - -
61. jhdm1da jhdm1da 512 0.997 - 0.997 - - - - - - -
62. tox4 tox4 1671 0.997 - 0.997 - - - - - - -
63. ube2e2 ENSDARG00000034670 5918 0.997 - 0.997 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
64. lrrc23 ENSDARG00000006174 234 0.997 - 0.997 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
65. cdk11b ENSDARG00000102546 1579 0.996 - 0.996 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
66. cnot3b ENSDARG00000019842 838 0.996 - 0.996 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
67. fosl2 ENSDARG00000040623 2041 0.996 - 0.996 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
68. igsf9a ENSDARG00000075864 1870 0.996 - 0.996 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
69. stxbp5b ENSDARG00000029234 760 0.996 - 0.996 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
70. sirt1 ENSDARG00000068064 1393 0.996 - 0.996 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
71. AL929204.1 AL929204.1 773 0.996 - 0.996 - - - - - - -
72. zfyve28 ENSDARG00000060430 797 0.996 - 0.996 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
73. si:ch211-218c6.8 ENSDARG00000092364 1270 0.996 - 0.996 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
74. tnfaip2a ENSDARG00000043416 688 0.996 - 0.996 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
75. meis4.1a meis4.1a 1165 0.995 - 0.995 - - - - - - -
76. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.995 - 0.995 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
77. larp1 ENSDARG00000101722 976 0.995 - 0.995 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
78. prrx1b ENSDARG00000042027 1128 0.995 - 0.995 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
79. setd7 ENSDARG00000038858 1072 0.995 - 0.995 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
80. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.995 - 0.995 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
81. mtpn ENSDARG00000104018 4264 0.995 - 0.995 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
82. chpfa ENSDARG00000078392 1427 0.995 - 0.995 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
83. BRCC3 ENSDARG00000098242 1123 0.995 - 0.995 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
84. CHD1 ENSDARG00000103787 1645 0.994 - 0.994 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
85. ppp2r5cb ENSDARG00000031200 1832 0.994 - 0.994 - - - - - - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
86. GABARAPL3 GABARAPL3 1198 0.994 - 0.994 - - - - - - -
87. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.994 - 0.994 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
88. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.993 - 0.993 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
89. hsd17b14 ENSDARG00000054842 1394 0.993 - 0.993 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
90. nol11 ENSDARG00000026767 2528 0.993 - 0.993 - - - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
91. tsc22d1 ENSDARG00000038306 2413 0.992 - 0.992 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
92. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.992 - 0.992 - - - - - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
93. sult1st4 ENSDARG00000003181 540 0.992 - 0.992 - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
94. sp1 ENSDARG00000088347 1697 0.992 - 0.992 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
95. znhit1 ENSDARG00000054574 979 0.992 - 0.992 - - - - - - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
96. nsun5 ENSDARG00000043209 764 0.992 - 0.992 - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
97. eny2 ENSDARG00000070046 3741 0.991 - 0.991 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
98. cebpa ENSDARG00000036074 751 0.991 - 0.991 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
99. MDP1 MDP1 687 0.991 - 0.991 - - - - - - -
100. pax9 ENSDARG00000053829 1193 0.991 - 0.991 - - - - - - - paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]

There are 1000 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA