Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn2b

Gene Name Gene ID Reads Annotation
scn2b ENSDARG00000101713 796 sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]










Genes with expression patterns similar to scn2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn2b ENSDARG00000101713 796 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
2. gng3 ENSDARG00000009553 2530 3.719 0.806 0.957 - - - 0.978 0.978 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
3. dbx2 2971 3.693 0.861 0.925 - - - 0.929 0.978 - - developing brain homeobox 2
4. stx1b ENSDARG00000000503 2724 3.616 0.922 0.918 - - - 0.810 0.966 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
5. cacng3b ENSDARG00000076401 91 3.58 0.856 0.909 - - - 0.869 0.946 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
6. snap25a ENSDARG00000020609 4537 3.542 0.834 0.945 - - - 0.806 0.957 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
7. slc1a2b ENSDARG00000102453 3136 3.538 0.871 0.897 - - - 0.846 0.924 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
8. nadl1.1 1200 3.536 0.864 0.855 - - - 0.828 0.989 - - neural adhesion molecule L1.1, transcript variant X1
9. sv2bb ENSDARG00000060711 196 3.527 0.846 0.985 - - - 0.726 0.970 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
10. scn8aa ENSDARG00000005775 792 3.497 0.881 0.876 - - - 0.842 0.898 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
11. TUBB8P7_1 TUBB8P7_1 2722 3.459 0.924 0.731 - - - 0.817 0.987 - -
12. MAP1A MAP1A 847 3.453 0.838 0.967 - - - 0.724 0.924 - -
13. rbfox3 rbfox3 1443 3.447 0.709 0.854 - - - 0.948 0.936 - -
14. si:ch211-152f6.6 si:ch211-152f6.6 278 3.433 0.784 0.959 - - - 0.856 0.834 - -
15. syt4 ENSDARG00000036505 421 3.424 0.881 0.838 - - - 0.898 0.807 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
16. calb1 ENSDARG00000031598 252 3.423 0.897 0.909 - - - 0.781 0.836 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
17. nova2 ENSDARG00000017673 7685 3.412 0.723 0.895 - - - 0.839 0.955 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
18. adam23a ENSDARG00000062323 580 3.402 0.806 0.861 - - - 0.805 0.930 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
19. zic6 ENSDARG00000071496 402 3.375 0.716 0.940 - - - 0.898 - 0.821 - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
20. C8H1orf106 C8H1orf106 2690 3.37 0.856 0.745 - - - 0.880 0.889 - -
21. pax6a ENSDARG00000103379 3061 3.369 0.764 0.792 - - - 0.885 0.928 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
22. GLRA3 ENSDARG00000011066 242 3.359 0.751 0.899 - - - 0.736 0.973 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
23. scrt2 ENSDARG00000056175 4331 3.356 0.770 0.976 - - - 0.722 0.888 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
24. sox19b ENSDARG00000040266 532 3.355 0.833 0.768 - - - 0.828 0.926 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
25. cadm3 ENSDARG00000057013 1545 3.344 0.841 0.821 - - - 0.763 0.919 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
26. GJD2_1 GJD2_1 3045 3.344 0.826 0.909 - - - 0.732 0.877 - -
27. neurog1 ENSDARG00000056130 3924 3.338 0.802 0.754 - - - 0.807 0.975 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
28. nrxn2a ENSDARG00000061454 291 3.326 0.849 0.791 - - - - 0.819 0.867 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
29. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 3.318 0.819 0.830 - - - - 0.932 0.737 - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
30. slc32a1 ENSDARG00000059775 1092 3.307 0.716 0.861 - - - 0.794 0.936 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
31. syngr3a ENSDARG00000014871 405 3.305 0.707 0.792 - - - 0.924 0.882 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
32. MCTP1 MCTP1 219 3.297 0.743 0.986 - - - 0.796 0.772 - -
33. gap43 ENSDARG00000099744 4114 3.286 0.832 0.815 - - - 0.709 0.930 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
34. jag1a ENSDARG00000030289 1275 3.277 0.738 0.890 - - - 0.788 0.861 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
35. slc18a3a ENSDARG00000006356 1285 3.273 0.719 0.829 - - - 0.748 0.977 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
36. pcdh1gc5 ENSDARG00000104826 10052 3.251 0.802 0.766 - - - 0.708 0.975 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
37. CR848045.1 CR848045.1 459 3.246 0.724 0.714 - - - 0.830 0.978 - -
38. draxin ENSDARG00000058256, ENSDARG00000111676 266 3.22 0.757 0.927 - - - 0.705 - 0.831 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
39. rtn1b ENSDARG00000021143 1682 3.216 0.836 0.821 - - - 0.710 0.849 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
40. zic1 ENSDARG00000015567 2520 3.209 0.843 0.708 - - - - 0.808 0.850 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
41. myt1b ENSDARG00000102879 5411 3.187 0.809 0.756 - - - 0.711 0.911 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
42. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.103 0.747 0.749 - - - 0.724 0.883 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
43. mapk11 ENSDARG00000045836 846 3.048 0.736 0.714 - - - 0.840 0.758 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
44. SV2B SV2B 208 2.833 0.895 1.000 - - - - 0.938 - -
45. syt11a ENSDARG00000057913 1145 2.796 0.896 0.936 - - - - 0.964 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
46. lhx1a ENSDARG00000014018 958 2.788 - 0.939 - - - 0.924 0.925 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
47. pcsk1nl ENSDARG00000076170 1232 2.78 0.894 0.896 - - - - 0.990 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
48. APBB3 ENSDARG00000053771 654 2.777 0.909 - - - - 0.889 0.979 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
49. her8.2 ENSDARG00000069675 315 2.774 0.936 - - - - 0.904 0.934 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
50. elavl4 ENSDARG00000045639 998 2.765 0.895 - - - - 0.893 0.977 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
51. amph ENSDARG00000007663 599 2.755 0.830 1.000 - - - - 0.925 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
52. CAMSAP3 ENSDARG00000059475 263 2.755 0.943 - - - - 0.938 0.874 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
53. zgc:194665 ENSDARG00000004577 136 2.754 0.907 - - - - 0.947 0.900 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
54. SPOCK1 ENSDARG00000074644 794 2.754 0.846 - - - - 0.939 0.969 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
55. stmn2a ENSDARG00000033234 2272 2.751 0.917 0.900 - - - - 0.934 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
56. bhlhe22 ENSDARG00000058039 1673 2.748 0.848 - - - - 0.941 0.959 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
57. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.735 0.898 - - - - 0.887 0.950 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
58. syt11b ENSDARG00000056105 578 2.732 0.909 0.947 - - - 0.876 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
59. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.728 0.908 - - - - 0.953 0.867 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
60. celf4 ENSDARG00000070045 1537 2.721 0.828 - - - - 0.902 0.991 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
61. sypb ENSDARG00000002230 262 2.719 0.882 - - - - 0.888 0.949 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
62. ATP6AP1L ATP6AP1L 164 2.717 0.816 - - - - 0.940 0.961 - -
63. LRRN3 LRRN3 261 2.715 0.841 0.896 - - - - 0.978 - -
64. TUBB8P7_2 TUBB8P7_2 565 2.706 0.865 - - - - 0.887 0.954 - -
65. slc8a2b ENSDARG00000100592 598 2.702 0.762 - - - - 0.974 0.966 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
66. pou4f1 ENSDARG00000005559 821 2.691 0.825 - - - - 0.881 0.985 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
67. atp1a3a ENSDARG00000018259 5393 2.686 0.922 0.818 - - - 0.946 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
68. neflb ENSDARG00000012426 298 2.686 - 0.909 - - - 0.785 0.992 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
69. slc35g2b ENSDARG00000045447 378 2.685 - 0.849 - - - 0.888 0.948 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
70. nefmb ENSDARG00000043697 2052 2.681 0.917 - - - - 0.928 0.836 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
71. itm2ca ENSDARG00000043448 1265 2.68 - 0.820 - - - 0.867 0.993 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
72. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.678 0.863 0.910 - - - - 0.905 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
73. TUBB2A TUBB2A 142 2.678 0.900 0.909 - - - - 0.869 - -
74. SKOR2 SKOR2 1041 2.66 0.844 - - - - 0.909 0.907 - -
75. gsx1 ENSDARG00000035735 1243 2.657 0.786 - - - - 0.915 0.956 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
76. cdk5r1b ENSDARG00000045087 2075 2.656 0.867 - - - - 0.854 0.935 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
77. epha4b ENSDARG00000011600 3110 2.656 0.852 - - - - 0.844 0.960 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
78. scn1bb ENSDARG00000105003 239 2.652 0.738 - - - - 0.944 0.970 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
79. nes ENSDARG00000088805 2710 2.652 - 0.952 - - - 0.739 0.961 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
80. NEFH NEFH 101 2.65 0.900 - - - - 0.891 0.859 - -
81. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.649 - 0.853 - - - 0.873 0.923 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
82. tmem179 ENSDARG00000013292 343 2.648 - 0.959 - - - 0.917 0.772 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
83. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.645 0.897 - - - - 0.776 0.972 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
84. znf804a ENSDARG00000027079 121 2.643 0.936 - - - - 0.906 0.801 - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
85. ppp2r2c ppp2r2c 441 2.636 0.851 - - - - 0.949 0.836 - -
86. rheb ENSDARG00000090213 1432 2.634 0.869 - - - - 0.896 0.869 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
87. rab39b rab39b 449 2.634 - 0.741 - - - 0.984 0.909 - -
88. si:ch211-138k19.2 si:ch211-138k19.2 398 2.634 0.742 0.909 - - - - 0.983 - -
89. cspg5a ENSDARG00000069981 1699 2.632 - - - - - 0.934 0.977 0.721 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
90. MAP6 MAP6 643 2.632 0.710 0.936 - - - - 0.986 - -
91. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.63 0.923 - - - - 0.767 0.940 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
92. PPP1R9B PPP1R9B 855 2.626 - - - - - 0.933 0.895 0.798 -
93. CU179656.1 ENSDARG00000107086 270 2.626 0.774 0.956 - - - 0.896 - - -
94. map1aa ENSDARG00000059601 599 2.626 0.846 - - - - 0.973 0.807 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
95. calca ENSDARG00000056590 150 2.624 - 0.844 - - - 0.800 0.980 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
96. porcn ENSDARG00000052558, ENSDARG00000111556 110 2.623 0.776 0.909 - - - 0.938 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
97. dnajc5aa ENSDARG00000042948 2885 2.623 0.782 - - - - 0.905 0.936 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
98. INA INA 950 2.62 0.892 - - - - 0.823 0.905 - -
99. gabrg2 ENSDARG00000053665 434 2.619 0.807 - - - - 0.853 0.959 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
100. ntrk2a ENSDARG00000059897 185 2.618 0.766 - - - - 0.902 0.950 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]

There are 2588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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