Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scn1a_2

Gene Name Gene ID Reads Annotation
scn1a_2 1 sodium channel, voltage-gated, type I, alpha, transcript variant X1










Genes with expression patterns similar to scn1a_2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
2. fbxo43 ENSDARG00000104186 40 1 1.000 - - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
3. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
4. cradd ENSDARG00000028192 153 1 1.000 - - - - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
5. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
6. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
7. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
8. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
9. bcl11aa ENSDARG00000061352 61 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
10. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
11. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
12. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
13. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
14. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
15. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
16. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
17. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
18. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
19. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
20. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
21. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
22. si:ch211-132b12.7 ENSDARG00000068374 30 1 1.000 - - - - - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
23. msxa msxa 263 1 1.000 - - - - - - - -
24. si:dkey-178e17.2 1 1 1.000 - - - - - - - - si:dkey-178e17.2, transcript variant X2
25. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
26. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
27. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
28. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
29. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
30. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
31. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
32. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
33. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
34. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
35. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
36. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
37. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
38. pcdh2ab7 7 1 1.000 - - - - - - - - protocadherin 2 alpha b 7
39. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
40. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
41. btbd3a ENSDARG00000005544 595 1 1.000 - - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
42. si:dkey-51d8.6 ENSDARG00000090769 17 1 1.000 - - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
43. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
44. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
45. CR848784.2 ENSDARG00000111157 16 1 1.000 - - - - - - - -
46. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
47. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
48. DSEL DSEL 1 1 1.000 - - - - - - - -
49. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
50. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
51. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
52. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
53. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
54. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
55. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
56. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
57. si:dkey-4m13.3 6 1 1.000 - - - - - - - - si:dkey-4m13.3
58. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
59. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
60. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
61. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
62. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
63. scn1a 8 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
64. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
65. ADAMTS15_1 ADAMTS15_1 11 1 1.000 - - - - - - - -
66. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
67. SERINC4 ENSDARG00000044815 45 1 1.000 - - - - - - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
68. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
69. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
70. si:dkey-208k4.1 si:dkey-208k4.1 15 1 1.000 - - - - - - - -
71. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
72. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
73. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
74. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
75. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
76. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
77. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
78. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
79. si:ch211-191a6.3 si:ch211-191a6.3 6 1 1.000 - - - - - - - -
80. si:ch73-269m14.3 ENSDARG00000096305 28 1 1.000 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
81. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
82. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
83. C3AR1 18 1 1.000 - - - - - - - - C3a anaphylatoxin chemotactic receptor
84. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
85. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
86. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
87. si:ch211-152l15.4 si:ch211-152l15.4 13 1 1.000 - - - - - - - -
88. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
89. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
90. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
91. EPHB1 ENSDARG00000076757 20 1 1.000 - - - - - - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
92. cyp2aa2 ENSDARG00000104811 77 1 1.000 - - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
93. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
94. prelp ENSDARG00000070597 99 1 1.000 - - - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
95. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
96. CD44 CD44 11 1 1.000 - - - - - - - -
97. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
98. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
99. CABZ01118678.1 ENSDARG00000091359 2 1 1.000 - - - - - - - - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
100. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]

There are 301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA