Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scn12aa

Gene Name Gene ID Reads Annotation
scn12aa ENSDARG00000090724 5 sodium channel, voltage gated, type XII, alpha a [Source:ZFIN;Acc:ZDB-GENE-060908-2]










Genes with expression patterns similar to scn12aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn12aa ENSDARG00000090724 5 3 - - 1.000 - - - - 1.000 1.000 sodium channel, voltage gated, type XII, alpha a [Source:ZFIN;Acc:ZDB-GENE-060908-2]
2. muc5f ENSDARG00000104914 1 1 - - - - - - - 1.000 - mucin 5f [Source:ZFIN;Acc:ZDB-GENE-110411-240]
3. si:ch211-95j8.3 ENSDARG00000092580 20 0.899 - - 0.899 - - - - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
4. tpbgl ENSDARG00000114338 5 0.876 - - - - - - - 0.876 - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
5. neu4 ENSDARG00000057677 1 0.871 - - 0.871 - - - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
6. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 0.871 - - 0.871 - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
7. fank1 ENSDARG00000039657 9 0.871 - - 0.871 - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
8. CU596012.1 CU596012.1 24 0.871 - - 0.871 - - - - - -
9. runx2a ENSDARG00000040261 1 0.871 - - 0.871 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
10. samd7 ENSDARG00000060354 15 0.871 - - 0.871 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
11. dfnb31b 1 0.871 - - 0.871 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
12. TDRD12 ENSDARG00000075217 3 0.871 - - 0.871 - - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
13. si:rp71-45g20.6 si:rp71-45g20.6 19 0.871 - - 0.871 - - - - - -
14. si:ch1073-75o15.4 ENSDARG00000094478 1 0.871 - - 0.871 - - - - - - si:ch1073-75o15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-199]
15. zswim6 ENSDARG00000101282 1 0.871 - - 0.871 - - - - - - zinc finger, SWIM-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-060602-4]
16. CR792453.1 ENSDARG00000095699 4 0.871 - - 0.871 - - - - - -
17. GPR137B GPR137B 50 0.871 - - 0.871 - - - - - -
18. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 0.871 - - 0.871 - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
19. sinup ENSDARG00000017163 5 0.871 - - 0.871 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
20. BX548078.2 BX548078.2 6 0.871 - - 0.871 - - - - - -
21. ankar ENSDARG00000000516 3 0.871 - - 0.871 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
22. tmem26b ENSDARG00000014682 2 0.871 - - 0.871 - - - - - - transmembrane protein 26b [Source:ZFIN;Acc:ZDB-GENE-080204-66]
23. clcf1 ENSDARG00000076140 5 0.871 - - 0.871 - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
24. kcnc2 ENSDARG00000057468 12 0.871 - - 0.871 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
25. clcn1b ENSDARG00000012269 12 0.871 - - 0.871 - - - - - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
26. smpdl3a ENSDARG00000053119 1 0.871 - - 0.871 - - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
27. si:ch211-199g17.8 si:ch211-199g17.8 9 0.871 - - 0.871 - - - - - -
28. si:dkey-115f9.2 si:dkey-115f9.2 18 0.871 - - 0.871 - - - - - -
29. CR753866.2 CR753866.2 6 0.863 - - 0.863 - - - - - -
30. lipt2 ENSDARG00000069852 14 0.862 - - - - - - - - 0.862 lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
31. si:ch211-202h22.7 ENSDARG00000073912 18 0.861 - - 0.861 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
32. si:ch211-207e19.16 si:ch211-207e19.16 3 0.849 - - 0.849 - - - - - -
33. lhpp ENSDARG00000060196 34 0.849 - - 0.849 - - - - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
34. crfb16 ENSDARG00000075181 40 0.849 - - 0.849 - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
35. taf4b ENSDARG00000075732 3 0.849 - - 0.849 - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
36. slc25a15b ENSDARG00000062271, ENSDARG00000111891 75 0.837 - - 0.837 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15b [Source:ZFIN;Acc:ZDB-GENE-060526-35]
37. CU929391.2 ENSDARG00000090304 3 0.835 - - - - - - - 0.835 -
38. CABZ01028403.3 CABZ01028403.3 4 0.835 - - - - - - - 0.835 -
39. 5S_rRNA_1 5S_rRNA_1 5 0.835 - - - - - - - 0.835 -
40. si:dkey-4c15.19 si:dkey-4c15.19 219 0.835 - - - - - - - 0.835 -
41. HTR7 17 0.835 - - - - - - - 0.835 - 5-hydroxytryptamine receptor 7
42. NAV1 NAV1 23 0.835 - - - - - - - 0.835 -
43. si:dkeyp-67d2.4 si:dkeyp-67d2.4 1 0.835 - - - - - - - 0.835 -
44. zgc:171310 ENSDARG00000110627 23 0.835 - - - - - - - 0.835 - zgc:171310 [Source:ZFIN;Acc:ZDB-GENE-070822-11]
45. CR356223.2 ENSDARG00000100655 4 0.835 - - - - - - - 0.835 -
46. C5H9orf171 C5H9orf171 34 0.835 - - - - - - - 0.835 -
47. twsg1b 7 0.835 - - - - - - - 0.835 - twisted gastrulation BMP signaling modulator 1b
48. si:dkey-92c21.3 si:dkey-92c21.3 2 0.835 - - - - - - - 0.835 -
49. mvb12bb ENSDARG00000079478 9 0.835 - - - - - - - 0.835 - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
50. znf652 ENSDARG00000062302 17 0.835 - - - - - - - 0.835 - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
51. si:ch211-3o3.8 si:ch211-3o3.8 2 0.835 - - - - - - - 0.835 -
52. si:dkey-100j22.3 si:dkey-100j22.3 0 0.835 - - - - - - - 0.835 -
53. AC024175.9 AC024175.9 56 0.835 - - - - - - - 0.835 -
54. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 0.835 - - - - - - - 0.835 - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
55. tas1r3 ENSDARG00000006341 3 0.835 - - - - - - - 0.835 - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
56. dab1b ENSDARG00000003290 7 0.835 - - - - - - - 0.835 - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
57. CU468041.1 ENSDARG00000092125 1 0.835 - - - - - - - 0.835 -
58. BX571823.5 BX571823.5 4 0.835 - - - - - - - 0.835 -
59. PPAP2C PPAP2C 0 0.835 - - - - - - - 0.835 -
60. il11a ENSDARG00000037859 5 0.835 - - - - - - - 0.835 - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
61. CR318595.2 CR318595.2 17 0.835 - - - - - - - 0.835 -
62. pvrl1a 0 0.835 - - - - - - - 0.835 - poliovirus receptor-related 1a, transcript variant X2
63. CABZ01073641.1 CABZ01073641.1 0 0.835 - - - - - - - 0.835 -
64. slc25a28_1 ENSDARG00000052994, ENSDARG00000113235 2 0.835 - - - - - - - 0.835 - solute carrier family 25 (mitochondrial iron transporter), member 28 [Source:ZFIN;Acc:ZDB-GENE-040426-2125]
65. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 0.832 - - 0.832 - - - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
66. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.832 - - 0.832 - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
67. ftr58 ENSDARG00000071238 10 0.827 - - 0.827 - - - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
68. RBM44 RBM44 25 0.825 - - 0.825 - - - - - -
69. USP43 USP43 14 0.811 - - 0.811 - - - - - -
70. si:ch211-22k7.1 si:ch211-22k7.1 30 0.809 - - 0.809 - - - - - -
71. lhx2a ENSDARG00000037964 3 0.806 - - 0.806 - - - - - - LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
72. LAMC2 ENSDARG00000068288 37 0.804 - - 0.804 - - - - - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
73. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 0.787 - - - - - - - 0.787 -
74. CU638738.1 CU638738.1 131 0.783 - - 0.783 - - - - - -
75. camta1a ENSDARG00000077428, ENSDARG00000116922 176 0.781 - - 0.781 - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
76. ODF3L2 40 0.78 - - - - - - - 0.780 - outer dense fiber of sperm tails 3-like 2
77. irf8 ENSDARG00000056407 85 0.779 - - 0.779 - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
78. dnm3 dnm3 45 0.775 - - 0.775 - - - - - -
79. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.775 - - 0.775 - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
80. FOLR1 FOLR1 25 0.768 - - 0.768 - - - - - -
81. slco2b1 ENSDARG00000054609 68 0.765 - - 0.765 - - - - - - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
82. si:ch211-215m21.29 si:ch211-215m21.29 5 0.764 - - 0.764 - - - - - -
83. BX511021.2 ENSDARG00000097646 5 0.764 - - - - - - - 0.764 -
84. lars2 ENSDARG00000075337 31 0.764 - - - - - - - 0.764 - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
85. si:dkey-19a16.10 si:dkey-19a16.10 3 0.75 - - 0.750 - - - - - -
86. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 0.75 - - - - - - - 0.750 -
87. CR376787.1 CR376787.1 10 0.748 - - - - - - - 0.748 -
88. si:dkey-163m14.6 5 0.745 - - - - - - - 0.745 - si:dkey-163m14.6
89. ABI3 ABI3 31 0.743 - - 0.743 - - - - - -
90. CABZ01021426.1 CABZ01021426.1 25 0.741 - - 0.741 - - - - - -
91. actl6b ENSDARG00000034107 9 0.741 - - - - - - - - 0.741 actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
92. racgap1 ENSDARG00000015460 38 0.741 - - - - - - - 0.741 - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
93. si:ch73-343l4.2 ENSDARG00000079903 10 0.739 - - 0.739 - - - - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
94. LRRC38 LRRC38 5 0.737 - - - - - - - - 0.737
95. zgc:136605 ENSDARG00000042972 2 0.737 - - - - - - - - 0.737 zgc:136605 [Source:ZFIN;Acc:ZDB-GENE-060312-11]
96. BX957278.1_1 ENSDARG00000010940 9 0.737 - - - - - - - - 0.737
97. trim108 ENSDARG00000061762, ENSDARG00000114698 5 0.737 - - - - - - - - 0.737 tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
98. si:ch211-264f5.2 ENSDARG00000078547 12 0.737 - - - - - - - - 0.737 si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
99. si:dkey-284p5.3 ENSDARG00000095638 4 0.737 - - - - - - - - 0.737 si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
100. TMEM173 ENSDARG00000091058 25 0.737 - - - - - - - - 0.737 transmembrane protein 173 [Source:ZFIN;Acc:ZDB-GENE-120921-1]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA