Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scml4

Gene Name Gene ID Reads Annotation
scml4 ENSDARG00000017266 194 Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]










Genes with expression patterns similar to scml4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scml4 ENSDARG00000017266 194 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
2. scn3b ENSDARG00000062359 242 1.707 - - - - - - 0.900 0.807 - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
3. BX901915.1 ENSDARG00000109857 195 1.637 - 0.792 - - - - 0.845 - -
4. wu:fi34b01 38 1.625 - 0.732 - - - - 0.893 - - wu:fi34b01
5. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.603 - - - - - - - 0.891 0.712 growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
6. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 1.599 - 0.712 - - - - 0.887 - -
7. CABZ01022575.2 CABZ01022575.2 83 1.598 - - - - - - 0.887 0.711 -
8. cadpsa ENSDARG00000043661 160 1.58 - - - - - 0.713 0.867 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
9. nkx6.1 ENSDARG00000022569 3779 1.528 - 0.759 - - - 0.769 - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
10. APOLD1 APOLD1 56 1.519 0.775 0.744 - - - - - - -
11. ache ENSDARG00000031796 1985 1.497 - 0.795 - - - 0.702 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
12. slc27a2b 72 1.491 0.755 - - - - - 0.736 - - solute carrier family 27 (fatty acid transporter), member 2b
13. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.489 - - - - - - 0.720 0.769 - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
14. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.459 0.723 - - - - - 0.736 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
15. pard3 pard3 161 1 - 1.000 - - - - - - -
16. si:ch211-218c6.9 si:ch211-218c6.9 40 0.948 - - - - - - 0.948 - -
17. lrrc24 ENSDARG00000101704 224 0.935 - - - - - - 0.935 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
18. GPR158 GPR158 64 0.933 - - - - - - 0.933 - -
19. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 0.931 - 0.931 - - - - - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
20. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.931 - - - - - - 0.931 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
21. gas8 ENSDARG00000101431 140 0.925 - - - - - - 0.925 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
22. kcnh7 ENSDARG00000062687 172 0.923 - - - - - - 0.923 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
23. prdm2b ENSDARG00000076451 97 0.92 0.920 - - - - - - - - PR domain containing 2, with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-080613-3]
24. nlgn4a 102 0.919 - - - - - - 0.919 - - neuroligin 4a, transcript variant X1
25. cbln2a ENSDARG00000074601 12 0.919 - - - - - - 0.919 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
26. CABZ01081752.1 ENSDARG00000099245 84 0.919 - - - - - - 0.919 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
27. PRRT4 ENSDARG00000088343 36 0.917 - - - - - - 0.917 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
28. cntn3a.1 ENSDARG00000062880 156 0.914 - - - - - - 0.914 - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
29. gemin5 ENSDARG00000079257 152 0.912 - - - - - - 0.912 - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
30. nmnat1 ENSDARG00000105748 102 0.91 - - - - - - 0.910 - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
31. mir184 48 0.908 - - - - - - 0.908 - - microRNA 184
32. PPP1R35 ENSDARG00000068916 94 0.906 - - - - - - 0.906 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
33. fosb ENSDARG00000055751 170 0.906 - - - - - - 0.906 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
34. C12H10orf71 C12H10orf71 595 0.904 - 0.904 - - - - - - -
35. sirt3 ENSDARG00000035819 101 0.904 - - - - - - 0.904 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
36. zbtb14 ENSDARG00000098273 36 0.902 - - - - - - 0.902 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
37. HERC4 ENSDARG00000059936 369 0.902 - - - - - - 0.902 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
38. pigm ENSDARG00000024277 86 0.902 - - - - - - 0.902 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
39. smtla ENSDARG00000038191 42 0.901 - - - - - - 0.901 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
40. CABZ01079241.1 ENSDARG00000098424 88 0.901 - - - - - - 0.901 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
41. zgc:114046 ENSDARG00000091728 68 0.9 - - - - - - 0.900 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
42. AL929092.1 ENSDARG00000092217 50 0.899 - - - - - - 0.899 - -
43. AP5B1 ENSDARG00000078805 62 0.898 - - - - - - 0.898 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
44. CABZ01112521.1 CABZ01112521.1 83 0.897 - - - - - - 0.897 - -
45. brca2 ENSDARG00000079015 410 0.894 0.894 - - - - - - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
46. si:zfos-364h11.1 99 0.894 - - - - - - 0.894 - - si:zfos-364h11.1, transcript variant X4
47. PRKCA_1 ENSDARG00000099841 12 0.893 - - - - - - 0.893 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
48. lppr5b lppr5b 23 0.893 - - - - - - 0.893 - -
49. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.893 - - - - - - 0.893 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
50. dlx6a ENSDARG00000042291 185 0.893 - - - - - - 0.893 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
51. CABZ01054405.1 CABZ01054405.1 115 0.893 - - - - - - 0.893 - -
52. HEATR2 HEATR2 6 0.893 - - - - - - 0.893 - -
53. ins ENSDARG00000035350, ENSDARG00000116735 317 0.893 - - - - - - 0.893 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
54. dapp1 ENSDARG00000039535 23 0.893 - - - - - - 0.893 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
55. C24H7orf10 C24H7orf10 7 0.893 - - - - - - 0.893 - -
56. rad51c ENSDARG00000068919 98 0.893 - - - - - - 0.893 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
57. FP085412.2 FP085412.2 5 0.893 - - - - - - 0.893 - -
58. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.893 - - - - - - 0.893 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
59. BX324215.3 BX324215.3 12 0.893 - - - - - - 0.893 - -
60. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.893 - - - - - - 0.893 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
61. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.893 - - - - - - 0.893 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
62. HIST1H4J HIST1H4J 31 0.893 - - - - - - 0.893 - -
63. FHOD3 FHOD3 422 0.893 - - - - - - 0.893 - -
64. si:ch211-271e10.2 ENSDARG00000092667 177 0.892 - 0.892 - - - - - - - si:ch211-271e10.2 [Source:ZFIN;Acc:ZDB-GENE-060526-146]
65. gfm2 ENSDARG00000005561 302 0.891 - - - - - - 0.891 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
66. cxxc4 ENSDARG00000077817 197 0.891 - - - - - - - 0.891 - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
67. CMKLR1 ENSDARG00000090890 36 0.891 - 0.891 - - - - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
68. MAGI3 MAGI3 114 0.89 - - - - - - 0.890 - -
69. smad2 ENSDARG00000006389 646 0.89 - - - - - - 0.890 - - SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
70. CCDC34 CCDC34 313 0.889 - - - - - - 0.889 - -
71. CU570684.5 CU570684.5 55 0.886 - - - - - - 0.886 - -
72. arhgef12b ENSDARG00000100913 1358 0.886 - - - - - - 0.886 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
73. drd4a ENSDARG00000038363 82 0.885 - - - - - - 0.885 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
74. slc5a11 ENSDARG00000019932 160 0.885 - - - - - - 0.885 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
75. olfml2bb ENSDARG00000021480 256 0.885 - - - - - - 0.885 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
76. BX936303.1 ENSDARG00000103105 26 0.884 - - - - - - 0.884 - -
77. CR478286.1_1 CR478286.1_1 306 0.884 - - - - - - 0.884 - -
78. arpc5lb ENSDARG00000035433 726 0.884 - - - - - - 0.884 - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
79. CMTM8_1 CMTM8_1 123 0.884 - - - - - - 0.884 - -
80. acad8 ENSDARG00000042658, ENSDARG00000116771 259 0.881 - 0.881 - - - - - - - acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828]
81. dgat1b ENSDARG00000054914 119 0.88 - - - - - - 0.880 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
82. mrap ENSDARG00000091992 9 0.88 - - - - - - 0.880 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
83. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 0.879 - 0.879 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
84. ulk1a ENSDARG00000062518 10 0.879 - - - - - - 0.879 - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
85. zdhhc24_1 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 40 0.879 - - - - - - 0.879 - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
86. cntn1b ENSDARG00000045685 159 0.876 - - - - - - 0.876 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
87. si:dkey-169i5.4 ENSDARG00000077862 511 0.876 - - - - - - 0.876 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
88. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.876 - - - - - - 0.876 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
89. CDH8 172 0.875 - - - - - - 0.875 - - cadherin 8
90. wdr47a ENSDARG00000078136 522 0.873 - - - - - - 0.873 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
91. mlh1 ENSDARG00000025948 130 0.873 - - - - - - 0.873 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
92. nck2a ENSDARG00000018206 231 0.873 - 0.873 - - - - - - - NCK adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-686]
93. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 0.873 - - - - - - 0.873 - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
94. cyp27a1.4 ENSDARG00000055159 47 0.872 - - - - - - 0.872 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
95. exosc8 ENSDARG00000068755 951 0.871 - - - - - - 0.871 - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
96. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.871 - - - - - - 0.871 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
97. BSN BSN 463 0.869 - - - - - - - 0.869 -
98. C1H9orf156 C1H9orf156 122 0.869 - - - - - - 0.869 - -
99. si:ch73-186j5.4 si:ch73-186j5.4 70 0.869 - - - - - - 0.869 - -
100. zyx ENSDARG00000075733 429 0.868 - - - - - - 0.868 - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]

There are 814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA