Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scin

Gene Name Gene ID Reads Annotation
scin ENSDARG00000010728, ENSDARG00000111092 437 scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]










Genes with expression patterns similar to scin

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scin ENSDARG00000010728, ENSDARG00000111092 437 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
2. PPFIA3 ENSDARG00000077053 310 2.554 - 1.000 - - - 0.815 0.739 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
3. CABZ01065506.1 CABZ01065506.1 204 2.532 0.752 1.000 - - - 0.780 - - -
4. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 2.497 0.738 1.000 - - - 0.759 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
5. hecw1 hecw1 241 2.345 - 0.888 - 0.701 - 0.756 - - -
6. BEND2 BEND2 92 1.869 - - - 0.869 - - 1.000 - -
7. sgms2 57 1.834 - 1.000 - - - 0.834 - - - sphingomyelin synthase 2, transcript variant X1
8. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.832 - 1.000 - - - 0.832 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
9. XKR7 ENSDARG00000026333 175 1.828 - 1.000 - - - 0.828 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
10. atat1 ENSDARG00000004472 700 1.82 - 1.000 - - - 0.820 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
11. SSBP2 ENSDARG00000099727 22 1.81 - 1.000 - - - 0.810 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
12. KCNIP4 ENSDARG00000088100 86 1.806 - 1.000 - - - 0.806 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
13. zgc:174697 zgc:174697 128 1.792 - 1.000 - - - 0.792 - - -
14. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.784 - 1.000 - - - - 0.784 - -
15. tmeff2b ENSDARG00000058699 82 1.776 0.776 1.000 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
16. si:dkey-21o19.6 si:dkey-21o19.6 18 1.774 - 1.000 - - - 0.774 - - -
17. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.772 - - - 0.844 - 0.928 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
18. si:dkey-56m15.4 si:dkey-56m15.4 39 1.752 0.752 1.000 - - - - - - -
19. lppr5b lppr5b 23 1.752 0.752 1.000 - - - - - - -
20. si:ch211-10j20.7 si:ch211-10j20.7 8 1.752 0.752 1.000 - - - - - - -
21. BX548021.2 BX548021.2 4 1.752 0.752 1.000 - - - - - - -
22. si:dkey-4j21.1 17 1.752 0.752 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
23. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.752 0.752 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
24. PGBD4 ENSDARG00000079328 20 1.752 0.752 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
25. gria2b ENSDARG00000052765 188 1.743 - 0.950 - - - - 0.793 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
26. bsk146 ENSDARG00000099069 274 1.74 - 1.000 - - - 0.740 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
27. CABZ01038313.1 CABZ01038313.1 79 1.738 - 1.000 - - - 0.738 - - -
28. slc12a5b ENSDARG00000078187 329 1.732 - 1.000 - - - - 0.732 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
29. gphnb ENSDARG00000100851 118 1.723 - 1.000 - - - - 0.723 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
30. syt9a ENSDARG00000003994 298 1.716 - 1.000 - - - 0.716 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
31. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.711 - 0.921 - - - - 0.790 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
32. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.703 - 1.000 - - - - 0.703 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
33. wu:fc75a09 ENSDARG00000111625 289 1.68 - - - 0.780 - 0.900 - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
34. trim9 ENSDARG00000039123 53 1.664 0.752 - - - - - 0.912 - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
35. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.658 - 0.900 - - - 0.758 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
36. TTC9 ENSDARG00000074363 196 1.653 - 0.761 - - - 0.892 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
37. KCNS1 KCNS1 24 1.653 - - - - - 0.813 0.840 - -
38. etaa1 ENSDARG00000074915 123 1.649 - 0.908 - - - - 0.741 - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
39. helt ENSDARG00000056400 482 1.648 0.752 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
40. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 - 0.822 - - - 0.826 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
41. pknox2 ENSDARG00000055349 784 1.636 0.873 - - - - 0.763 - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
42. cnn1b ENSDARG00000102398 40 1.635 0.752 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
43. mapk8ip2 ENSDARG00000063157 467 1.615 - 0.861 - - - 0.754 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
44. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.61 - 0.776 - - - - 0.834 - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
45. pisd ENSDARG00000052462, ENSDARG00000110128 463 1.604 - - - 0.741 - - 0.863 - - phosphatidylserine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-061215-46]
46. zic3 ENSDARG00000071497 1448 1.604 0.802 - - - - 0.802 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
47. dpysl5b ENSDARG00000059311 600 1.602 - 0.816 - - - - 0.786 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
48. mcm9 ENSDARG00000013528 212 1.6 - - - - - 0.771 0.829 - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
49. adarb1a ENSDARG00000041609 476 1.591 - - - 0.835 - 0.756 - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
50. atpv0e2 ENSDARG00000059057 585 1.587 - - - - - 0.803 0.784 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
51. cbln1 ENSDARG00000057296 165 1.586 0.770 - - - - 0.816 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
52. ppp2r2ba 321 1.579 - - - 0.783 - 0.796 - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
53. tor3a ENSDARG00000079308 142 1.579 - 0.813 - - - - 0.766 - - torsin family 3, member A [Source:ZFIN;Acc:ZDB-GENE-081104-165]
54. KCNJ3_1 KCNJ3_1 30 1.575 0.752 - - - - 0.823 - - -
55. DLK1 60 1.572 0.752 - - - - 0.820 - - - delta like non-canonical Notch ligand 1
56. B4GALNT1 B4GALNT1 352 1.571 - 0.753 - - - 0.818 - - -
57. kcng1 ENSDARG00000099038 23 1.571 0.752 - - - - 0.819 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
58. zgc:162576 zgc:162576 56 1.569 - 0.802 - - - - 0.767 - -
59. CLDN20 26 1.569 0.752 - - - - 0.817 - - - claudin 20, transcript variant X2
60. PROCA1 ENSDARG00000069823 343 1.567 - - - - - 0.792 0.775 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
61. fancd2 ENSDARG00000053574 247 1.564 - - - 0.762 - 0.802 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
62. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.563 - 0.771 - - - - 0.792 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
63. kcnj11l ENSDARG00000031438 369 1.554 - - - - - 0.797 0.757 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
64. calb1 ENSDARG00000031598 252 1.549 0.708 - - - - - 0.841 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
65. noc3l ENSDARG00000002487 230 1.549 - - - 0.831 - 0.718 - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
66. rheb ENSDARG00000090213 1432 1.548 - - - 0.785 - - 0.763 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
67. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.547 0.763 - - - - - 0.784 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
68. ENSDARG00000086878 ENSDARG00000086878 332 1.542 - - - 0.722 - 0.820 - - -
69. sox2 ENSDARG00000070913 2763 1.541 - - - - - 0.769 0.772 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
70. zdhhc12b ENSDARG00000052787 43 1.538 0.752 - - - - 0.786 - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
71. BX470131.1 BX470131.1 86 1.535 0.752 - - - - 0.783 - - -
72. nrsn1 ENSDARG00000111235 123 1.532 - - - - - 0.767 0.765 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
73. CABZ01029822.1 ENSDARG00000086931 1654 1.528 0.732 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
74. si:ch211-240g9.1 36 1.524 - 0.704 - - - 0.820 - - - si:ch211-240g9.1
75. mnx2a ENSDARG00000042106 939 1.524 - 0.813 - - - - 0.711 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
76. st6gal1 ENSDARG00000044514 142 1.516 - - - - - 0.767 0.749 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
77. zgc:113307 ENSDARG00000044894 17 1.511 0.752 - - - - 0.759 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
78. esyt1a ENSDARG00000034714 129 1.511 - - - - - - 0.711 0.800 - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
79. dcaf15 ENSDARG00000077790 1039 1.509 0.714 - - - - - 0.795 - - DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
80. si:dkey-23a23.3 ENSDARG00000088214 86 1.507 - - - - - 0.791 0.716 - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
81. si:dkey-100n10.2 101 1.505 - - - - - 0.763 0.742 - - si:dkey-100n10.2
82. C8H9orf172 C8H9orf172 113 1.501 0.752 - - - - - 0.749 - -
83. CU856359.2 CU856359.2 182 1.5 - - - - - 0.716 0.784 - -
84. thsd7ba ENSDARG00000095022 231 1.499 - 0.770 - - - 0.729 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
85. SLC9B1 SLC9B1 137 1.496 - 0.704 - - - 0.792 - - -
86. cacng8a ENSDARG00000020450 32 1.495 - - - - - 0.764 0.731 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
87. cnih3 ENSDARG00000014953 25 1.494 0.763 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
88. atp1b4 ENSDARG00000053262 1337 1.492 - 0.764 - - - - 0.728 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
89. si:ch211-216b21.2 ENSDARG00000060253 54 1.492 0.752 - - - - - 0.740 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
90. kcnn1a ENSDARG00000091306 95 1.49 - - - - - 0.766 0.724 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
91. CSMD1 CSMD1 15 1.483 0.752 0.731 - - - - - - -
92. DTX4 ENSDARG00000076302 2642 1.481 - - - - - 0.717 0.764 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
93. her15.2 her15.2 1701 1.477 - - - - - 0.741 0.736 - -
94. thap4 ENSDARG00000077323 434 1.477 - - - 0.761 - 0.716 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
95. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.475 - 0.710 - - - 0.765 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
96. kif18a ENSDARG00000008022 546 1.472 0.724 - - - - 0.748 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
97. atp2b3b ENSDARG00000023445 1424 1.465 - 0.716 - - - - 0.749 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
98. thsd7a thsd7a 194 1.464 - 0.751 - - - - 0.713 - -
99. rtn4r ENSDARG00000090035 46 1.461 0.752 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
100. slc6a1b ENSDARG00000039647 1301 1.461 - - - - - 0.743 0.718 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]

There are 1721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA