Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scg5

Gene Name Gene ID Reads Annotation
scg5 ENSDARG00000032126, ENSDARG00000077045 29 secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]










Genes with expression patterns similar to scg5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scg5 ENSDARG00000032126, ENSDARG00000077045 29 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
2. si:ch211-152f6.6 si:ch211-152f6.6 278 2.67 0.841 0.946 0.883 - - - - - -
3. sox12 ENSDARG00000025847 681 2.571 0.725 1.000 - - - - 0.846 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
4. MCF2L2 ENSDARG00000079742 52 2.542 - 1.000 - - - 0.724 0.818 - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
5. RIMS1 RIMS1 9 2.522 0.820 1.000 - - - 0.702 - - -
6. gltpb ENSDARG00000077962 5 2.509 - 1.000 - - 0.807 0.702 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
7. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.137 0.700 0.704 - - - - 0.733 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
8. GJD2_1 GJD2_1 3045 2 1.000 1.000 - - - - - - -
9. C10H5orf63 C10H5orf63 17 2 - 1.000 - - - 1.000 - - -
10. kif17 ENSDARG00000055238 12 1.989 - 1.000 0.989 - - - - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
11. ankrd37 ENSDARG00000056376 131 1.938 0.938 1.000 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
12. TUBB2A TUBB2A 142 1.916 0.916 1.000 - - - - - - -
13. rgs7 rgs7 208 1.908 0.962 0.946 - - - - - - -
14. calb1 ENSDARG00000031598 252 1.856 0.856 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
15. KCNAB2 KCNAB2 129 1.855 0.855 1.000 - - - - - - -
16. TRPC4_1 TRPC4_1 212 1.833 0.833 1.000 - - - - - - -
17. pkd2l1 ENSDARG00000022503 372 1.825 - 0.901 - - - - 0.924 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
18. GRIK3 ENSDARG00000077715 178 1.82 0.820 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
19. lmx1a ENSDARG00000020354 111 1.82 0.820 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
20. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.82 0.820 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
21. crispld1a ENSDARG00000077275 7 1.82 0.820 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
22. si:ch211-122l14.7 ENSDARG00000095576 5 1.812 - 1.000 - - 0.812 - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
23. CLDN20 26 1.812 - 1.000 - - 0.812 - - - - claudin 20, transcript variant X2
24. si:dkeyp-107f9.4 ENSDARG00000104468 11 1.799 0.820 - 0.979 - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
25. si:dkey-220a11.9 si:dkey-220a11.9 10 1.796 - 1.000 - - 0.796 - - - -
26. si:ch211-138k19.2 si:ch211-138k19.2 398 1.794 0.794 1.000 - - - - - - -
27. gfra3 ENSDARG00000087704 122 1.77 - 1.000 - - - - 0.770 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
28. BX469915.2 BX469915.2 48 1.77 - 1.000 - - - - 0.770 - -
29. sst2 ENSDARG00000014190 617 1.759 - 1.000 - - 0.759 - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
30. syt11a ENSDARG00000057913 1145 1.752 0.850 0.902 - - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
31. sstr1a ENSDARG00000104922 22 1.747 - - 0.977 - - - 0.770 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
32. trim46b ENSDARG00000058649 54 1.747 0.747 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
33. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.741 0.978 0.763 - - - - - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
34. scn2b ENSDARG00000101713 796 1.735 0.826 0.909 - - - - - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
35. si:ch211-215m21.17 si:ch211-215m21.17 14 1.734 - 1.000 - 0.734 - - - - -
36. pax6b ENSDARG00000045936 349 1.733 0.770 - - - - 0.963 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
37. urp2 ENSDARG00000067781 85 1.733 - 0.752 - - - - 0.981 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
38. tagln3a ENSDARG00000079805 123 1.732 - 1.000 - - - - 0.732 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
39. aspn ENSDARG00000002192 218 1.726 - 1.000 0.726 - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
40. NPPC ENSDARG00000068126 45 1.722 - 1.000 - - - - 0.722 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
41. EGLN1 EGLN1 62 1.721 0.962 0.759 - - - - - - -
42. kcnk10b ENSDARG00000045956 43 1.718 - 1.000 - - - 0.718 - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
43. FRMPD1 34 1.711 0.711 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
44. rnft2 ENSDARG00000053019 270 1.709 - 0.822 - - - - 0.887 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
45. nkx1.2lb ENSDARG00000099427 220 1.706 0.825 0.881 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
46. syt11b ENSDARG00000056105 578 1.703 0.729 0.974 - - - - - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
47. htr3a ENSDARG00000089212 51 1.703 0.703 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
48. rbfox3l rbfox3l 34 1.702 - 1.000 - - - 0.702 - - -
49. si:dkey-97l20.5 si:dkey-97l20.5 33 1.702 - 1.000 - - - 0.702 - - -
50. mfsd4a mfsd4a 179 1.702 - 1.000 - - - 0.702 - - -
51. hoxc9a ENSDARG00000092809 18 1.702 - 1.000 - - - 0.702 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
52. DKK3 DKK3 12 1.702 - 1.000 - - - 0.702 - - -
53. si:ch73-115f13.1 si:ch73-115f13.1 15 1.682 0.820 - 0.862 - - - - - -
54. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.679 - - 0.915 - - - 0.764 - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
55. tnr ENSDARG00000020771 20 1.672 0.820 - - - - 0.852 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
56. cbln2b ENSDARG00000077151 38 1.672 0.855 - - - - - 0.817 - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
57. FJX1 ENSDARG00000035873 22 1.669 0.820 - - - 0.849 - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
58. lrrc4bb ENSDARG00000014792 47 1.667 - 0.889 - - - - 0.778 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
59. CR394546.2 ENSDARG00000090061 3 1.666 0.820 - - - - - - - 0.846
60. nrxn2a ENSDARG00000061454 291 1.661 0.780 0.881 - - - - - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
61. epo epo 41 1.655 - 0.816 0.839 - - - - - -
62. nrsn1 ENSDARG00000111235 123 1.653 - 0.913 - - - - 0.740 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
63. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.651 0.742 0.909 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
64. sox19b ENSDARG00000040266 532 1.65 0.862 - - - - 0.788 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
65. gng3 ENSDARG00000009553 2530 1.65 0.721 0.929 - - - - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
66. dbx2 2971 1.644 0.863 0.781 - - - - - - - developing brain homeobox 2
67. slc30a2 ENSDARG00000021305 4 1.64 0.938 - - - - 0.702 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
68. cacna1da ENSDARG00000102773 114 1.636 0.910 - - - - 0.726 - - - calcium channel, voltage-dependent, L type, alpha 1D subunit, a [Source:ZFIN;Acc:ZDB-GENE-030616-135]
69. MAP1A MAP1A 847 1.629 0.818 0.811 - - - - - - -
70. rtn1b ENSDARG00000021143 1682 1.623 0.840 0.783 - - - - - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
71. NPDC1 NPDC1 126 1.622 0.820 0.802 - - - - - - -
72. nmnat2 ENSDARG00000004580 370 1.617 0.742 - - - - - 0.875 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
73. FAM196A 82 1.614 - 0.901 - - - - 0.713 - - family with sequence similarity 196 member A
74. ppp1r1c ENSDARG00000038941 265 1.612 0.705 0.907 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]
75. tmem240 tmem240 180 1.612 0.752 - - - - - 0.860 - -
76. CCSAP CCSAP 147 1.611 0.820 - 0.791 - - - - - -
77. dtnbb ENSDARG00000013020 280 1.605 - 0.756 - - - - 0.849 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
78. BX530409.1 BX530409.1 65 1.603 0.820 - 0.783 - - - - - -
79. pcsk1nl ENSDARG00000076170 1232 1.6 0.855 0.745 - - - - - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
80. scn8aa ENSDARG00000005775 792 1.593 0.839 0.754 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
81. UNC13A UNC13A 36 1.59 0.820 - - - - - 0.770 - -
82. CR352328.3 CR352328.3 9 1.588 0.820 - - - 0.768 - - - -
83. CR407704.1 CR407704.1 188 1.579 0.837 - - - - 0.742 - - -
84. zgc:113625 ENSDARG00000054160 276 1.575 - - 0.862 - - 0.713 - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
85. pknox2 ENSDARG00000055349 784 1.575 0.710 - - - - - 0.865 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
86. zgc:114037_2 11 1.57 0.820 - - - - - - - 0.750 zgc:114037
87. npffr1l2 ENSDARG00000062631 127 1.561 0.764 0.797 - - - - - - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
88. nfasca ENSDARG00000061099, ENSDARG00000109524 275 1.559 - - - - - 0.789 0.770 - - neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
89. si:dkey-245p14.4 ENSDARG00000070320 418 1.555 0.730 0.825 - - - - - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
90. lbx1b ENSDARG00000018611 399 1.554 0.765 0.789 - - - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
91. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.551 0.727 - - - - 0.824 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
92. hs3st3l ENSDARG00000059903 184 1.546 0.801 0.745 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
93. stx1b ENSDARG00000000503 2724 1.544 0.730 0.814 - - - - - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
94. LRRN3 LRRN3 261 1.541 0.789 0.752 - - - - - - -
95. pcdh2ac ENSDARG00000099783 325 1.54 - 0.710 - - - 0.830 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
96. her8.2 ENSDARG00000069675 315 1.537 0.781 - - - - 0.756 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
97. sv2bb ENSDARG00000060711 196 1.533 - 0.822 - - - 0.711 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
98. neto1l ENSDARG00000071596 57 1.53 0.725 - - - - 0.805 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
99. efna3b ENSDARG00000098295 319 1.53 0.749 - - - - 0.781 - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
100. gria2b ENSDARG00000052765 188 1.525 0.820 - - - - - 0.705 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]

There are 1412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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