Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scg3

Gene Name Gene ID Reads Annotation
scg3 ENSDARG00000086288, ENSDARG00000115955 1587 secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]










Genes with expression patterns similar to scg3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
2. SYNPO2L SYNPO2L 6697 1.933 - 0.959 - - - - 0.974 - -
3. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.765 - - - - - 0.767 0.998 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
4. clcn5 clcn5 492 1.743 0.773 0.970 - - - - - - -
5. ptpn9a ENSDARG00000077495 2295 1.742 - 0.987 - - - 0.755 - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
6. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.737 - 0.981 - - - 0.756 - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
7. psma6a ENSDARG00000019398 2702 1.735 - 0.980 - - - - - 0.755 - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
8. h1fx ENSDARG00000054058 4075 1.704 - - - - - 0.705 0.999 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
9. fam20a ENSDARG00000079486 1199 1.704 0.715 0.989 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
10. SH3D21 ENSDARG00000099448 1726 1.689 - 0.975 - - - 0.714 - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
11. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.675 - 0.970 - - - 0.705 - - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
12. vimp 4034 1.611 - 0.903 - - - 0.708 - - - VCP-interacting membrane selenoprotein
13. C2CD2 ENSDARG00000105000 2573 1.585 0.804 - - - - 0.781 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
14. mrpl24 ENSDARG00000019222 798 1.572 - - - 0.760 - 0.812 - - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
15. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.538 - - - - - 0.719 0.819 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
16. rfx2 ENSDARG00000013575 1275 1.526 - - - - - 0.815 - 0.711 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
17. maff ENSDARG00000028957, ENSDARG00000111050 1809 1.519 - - - 0.734 - 0.785 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
18. C24H8orf44 C24H8orf44 405 1.508 - - - 0.717 - 0.791 - - -
19. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.504 - - - 0.734 - 0.770 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
20. rhogc ENSDARG00000028401 2671 1.494 0.703 0.791 - - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
21. bc2 5213 1.479 - - - - - 0.726 - 0.753 - putative breast adenocarcinoma marker
22. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.409 - - - - - 0.700 - 0.709 - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
23. arrdc3a ENSDARG00000052690 2280 1 - - - - - - 1.000 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
24. pigo ENSDARG00000011743 928 1 - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
25. inpp5e ENSDARG00000103926 567 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
26. lgi2a ENSDARG00000111069 965 1 - - - - - - 1.000 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
27. igfbp1a ENSDARG00000099351 1717 1 - - - - - - 1.000 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
28. CR388132.2 ENSDARG00000104041 640 1 - - - - - - 1.000 - -
29. C20H2orf44 C20H2orf44 486 1 - - - - - - 1.000 - -
30. TNRC18 ENSDARG00000077052 1095 1 - - - - - - 1.000 - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
31. galnt11 ENSDARG00000063636 1188 1 - - - - - - 1.000 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
32. CU457815.1 ENSDARG00000115823 1005 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
33. zbtb18 ENSDARG00000028228 3653 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. USP31 ENSDARG00000074017 628 1 - - - - - - 1.000 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
35. adssl ENSDARG00000012399 2271 1 - - - - - - 1.000 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
36. GPANK1 ENSDARG00000053995 1535 1 - - - - - - 1.000 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
37. TUBB8P7 TUBB8P7 1353 1 - - - - - - 1.000 - -
38. SLC29A4 ENSDARG00000059690 470 1 - - - - - - 1.000 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
39. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 1 - - - - - - 1.000 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
40. ARHGAP35 2409 1 - - - - - - 1.000 - - Rho GTPase activating protein 35b, transcript variant X2
41. kif5aa ENSDARG00000098936 2428 1 - - - - - - 1.000 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
42. dnajc8 ENSDARG00000059373 1858 1 - - - - - - 1.000 - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
43. ZNF462 ENSDARG00000112909 1132 1 - - - - - - 1.000 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
44. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 1 - - - - - - 1.000 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
45. dkk2 ENSDARG00000076420 553 1 - - - - - - 1.000 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
46. echdc2 ENSDARG00000016607 719 1 - - - - - - 1.000 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
47. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 1 - - - - - - 1.000 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
48. cux2b ENSDARG00000086345 519 1 - - - - - - 1.000 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
49. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 1 - - - - - - 1.000 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
50. AP2A1 ENSDARG00000054320 5591 0.999 - - - - - - 0.999 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
51. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.999 - - - - - - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
52. CAMK2G CAMK2G 3537 0.999 - - - - - - 0.999 - -
53. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.999 - - - - - - 0.999 - -
54. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.999 - - - - - - 0.999 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
55. ctdsp1 ENSDARG00000040674 2828 0.999 - - - - - - 0.999 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
56. prkag1 ENSDARG00000003818 2800 0.999 - - - - - - 0.999 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
57. CABZ01075242.1_1 ENSDARG00000114227 1012 0.999 - - - - - - 0.999 - -
58. fbl ENSDARG00000053912 5891 0.999 - - - - - - 0.999 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
59. mtmr14 ENSDARG00000059642 1405 0.999 - - - - - - 0.999 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
60. med6 ENSDARG00000034734 2711 0.999 - - - - - - 0.999 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
61. rbms1a ENSDARG00000074023 2742 0.999 - - - - - - 0.999 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
62. elmo1 ENSDARG00000098753 6966 0.999 - - - - - - 0.999 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
63. mapre1b ENSDARG00000002659 9119 0.999 - - - - - - 0.999 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
64. mapk6 ENSDARG00000032103 6422 0.999 - - - - - - 0.999 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
65. cd276 ENSDARG00000003061 2798 0.999 - - - - - - 0.999 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
66. vamp2 ENSDARG00000056877 2158 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
67. irx3a ENSDARG00000101076 3106 0.999 - - - - - - 0.999 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
68. hoxb3a ENSDARG00000029263 5493 0.999 - - - - - - 0.999 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
69. degs1 ENSDARG00000007347 2481 0.999 - - - - - - 0.999 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
70. pfkma ENSDARG00000014179 1293 0.999 - - - - - - 0.999 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
71. SH3BGRL ENSDARG00000058302 4525 0.998 - - - - - - 0.998 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
72. grpel2 ENSDARG00000069421 5673 0.998 - - - - - - 0.998 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
73. TNRC6C_1 TNRC6C_1 6574 0.998 - - - - - - 0.998 - -
74. gys1 ENSDARG00000016875 2037 0.998 - - - - - - 0.998 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
75. timm13 ENSDARG00000058297 4447 0.998 - - - - - - 0.998 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
76. prkacba ENSDARG00000001782 1340 0.998 - - - - - - 0.998 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
77. arf6b ENSDARG00000052928 4585 0.998 - - - - - - 0.998 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
78. zranb2 ENSDARG00000044332 6723 0.998 - - - - - - 0.998 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
79. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.998 - - - - - - 0.998 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
80. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 0.997 - - - - - - 0.997 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
81. si:ch73-110p20.1 5932 0.997 - - - - - - 0.997 - - si:ch73-110p20.1
82. snrnp27 ENSDARG00000035625 9080 0.997 - - - - - - 0.997 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
83. ywhaqa ENSDARG00000042539 7034 0.997 - - - - - - 0.997 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
84. ppa1b ENSDARG00000030441 9027 0.997 - - - - - - 0.997 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
85. tob1b ENSDARG00000021372 7048 0.996 - - - - - - 0.996 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
86. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.996 - - - - - - 0.996 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
87. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.996 - - - - - - 0.996 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
88. CHD1 ENSDARG00000103787 1645 0.996 - 0.996 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
89. meis1 meis1 6937 0.996 - - - - - - 0.996 - -
90. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.996 - - - - - - 0.996 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
91. fundc2 ENSDARG00000103740 3856 0.996 - - - - - - 0.996 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
92. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 0.995 - - - - - - 0.995 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
93. fubp1 ENSDARG00000029248 15259 0.995 - - - - - - 0.995 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
94. vamp1 ENSDARG00000031283 3094 0.995 - - - - - - 0.995 - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
95. si:rp71-45k5.4 ENSDARG00000035679 10411 0.994 - - - - - - 0.994 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
96. zgc:110339 ENSDARG00000046030 8180 0.993 - - - - - - 0.993 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
97. sirt1 ENSDARG00000068064 1393 0.993 - 0.993 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
98. sept9a ENSDARG00000020235 6881 0.992 - - - - - - 0.992 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
99. ctnnb1 ENSDARG00000014571 12004 0.992 - - - - - - 0.992 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
100. cct5 ENSDARG00000045399 11572 0.991 - - - - - - 0.991 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]

There are 863 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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