Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scfd2

Gene Name Gene ID Reads Annotation
scfd2 ENSDARG00000040005, ENSDARG00000116272 7 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]










Genes with expression patterns similar to scfd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 6 - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
2. HIST1H2BA ENSDARG00000116654 10 2.749 - 1.000 - 0.749 - - 1.000 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
3. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 2 - 1.000 - - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
4. lmx1a ENSDARG00000020354 111 2 - 1.000 - - - - 1.000 - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
5. si:ch211-215m21.17 si:ch211-215m21.17 14 1.963 - 1.000 - - - - 0.963 - -
6. hspbap1 ENSDARG00000033771 41 1.957 - 1.000 - - - - 0.957 - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
7. TMEM74 26 1.946 - 1.000 - - - - 0.946 - - transmembrane protein 74, transcript variant X3
8. si:dkey-97l20.5 si:dkey-97l20.5 33 1.915 - 1.000 - - - - 0.915 - -
9. cyp2j20 ENSDARG00000094057 44 1.891 - 1.000 - - - - 0.891 - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
10. C18H15orf59 C18H15orf59 80 1.874 - 1.000 - - - - 0.874 - -
11. si:ch73-141f17.1 si:ch73-141f17.1 1 1.842 - 1.000 - - 0.842 - - - -
12. zeb2b ENSDARG00000078416 23 1.842 - 1.000 - - 0.842 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
13. si:dkey-13i19.10 si:dkey-13i19.10 2 1.842 - - - - 0.842 - 1.000 - -
14. XRCC2 ENSDARG00000013933 15 1.837 - 1.000 - - - - - - 0.837 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
15. si:dkeyp-46h3.3 ENSDARG00000092887 11 1.837 - 1.000 - - - - - - 0.837 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
16. sts ENSDARG00000053241 10 1.837 - - - - - - 1.000 - 0.837 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
17. DNAI1 DNAI1 11 1.822 - 0.822 - - - - 1.000 - -
18. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.811 - - - - 0.937 - 0.874 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
19. si:dkey-45k15.1 ENSDARG00000061714 32 1.797 - - - 0.797 - - 1.000 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
20. CT573468.1 CT573468.1 283 1.795 - - - - - - 0.958 - 0.837
21. ABCA7 ABCA7 12 1.784 - 1.000 0.784 - - - - - -
22. ciita ENSDARG00000090851 5 1.765 - - - - - - 1.000 - 0.765 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
23. si:dkey-119g10.4 si:dkey-119g10.4 7 1.759 - 1.000 - - - - 0.759 - -
24. cpeb1a ENSDARG00000045932 81 1.757 - 0.822 - - - - 0.935 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
25. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1.75 - - - - 0.842 - 0.908 - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
26. si:dkey-14d8.2 38 1.747 - - - - - - 0.910 - 0.837 si:dkey-14d8.2
27. TMEM98 ENSDARG00000059743 214 1.747 - 1.000 - - - - 0.747 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
28. PLCXD1_3 PLCXD1_3 35 1.726 - 1.000 - 0.726 - - - - -
29. irf1b ENSDARG00000043249 30 1.677 - 0.960 - 0.717 - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
30. slc8a1a ENSDARG00000013422 12 1.655 - - - - 0.824 - - - 0.831 solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
31. rasal3 ENSDARG00000089933 17 1.651 - - - - 0.735 - 0.916 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
32. U1_15 U1_15 1 1.639 - - - 0.797 0.842 - - - -
33. FAM175B FAM175B 23 1.635 - - 0.793 - 0.842 - - - -
34. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1.622 - - - - 0.842 - - - 0.780 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
35. si:dkey-222o15.4 si:dkey-222o15.4 4 1.607 - - - - 0.842 - - - 0.765
36. CU104716.1 ENSDARG00000109332 12 1.599 - - - - 0.762 - - - 0.837
37. BRPF1 ENSDARG00000103665 10 1.586 - - - - 0.842 - - - 0.744 bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
38. BX664622.1 ENSDARG00000101754 39 1.579 - - - - - - 0.742 - 0.837
39. wu:fe11b02_1 wu:fe11b02_1 7 1.559 - - - 0.797 0.762 - - - -
40. slc13a5 slc13a5 15 1.553 - 0.704 - - - - 0.849 - -
41. CABZ01064671.1 ENSDARG00000039935 21 1.493 - - - - 0.706 - - - 0.787
42. si:ch211-80h18.1 ENSDARG00000078522 1941 1.452 - 0.710 - - - - 0.742 - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
43. CU695006.1 CU695006.1 4 1 - 1.000 - - - - - - -
44. CU915778.1 ENSDARG00000099025 40 1 - - - - - - 1.000 - -
45. DKK3 DKK3 12 1 - 1.000 - - - - - - -
46. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
47. FUT9 FUT9 91 1 - 1.000 - - - - - - -
48. rfc4 ENSDARG00000042458 2 1 - - - - - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
49. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1 - - - - - - 1.000 - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
50. CABZ01108997.2 CABZ01108997.2 1 1 - - - - - - 1.000 - -
51. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
52. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
53. TNFRSF14_4 TNFRSF14_4 5 1 - - - - - - 1.000 - -
54. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
55. CU896563.2 CU896563.2 2 1 - 1.000 - - - - - - -
56. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - - - 1.000 - -
57. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 - - - - - - 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
58. wfikkn2b ENSDARG00000059139 45 1 - - - - - - 1.000 - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
59. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - 1.000 - - - - - - -
60. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
61. CU138503.3 CU138503.3 31 1 - 1.000 - - - - - - -
62. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
63. si:dkey-234l24.2p si:dkey-234l24.2p 1 1 - - - - - - 1.000 - -
64. DNAH10 ENSDARG00000061486 29 1 - 1.000 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
65. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
66. tagln3a ENSDARG00000079805 123 1 - 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
67. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
68. PLXNB2_1 PLXNB2_1 10 1 - - - - - - 1.000 - -
69. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
70. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
71. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
72. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
73. prdm14 ENSDARG00000045371 106 1 - 1.000 - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
74. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
75. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
76. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
77. NPPC ENSDARG00000068126 45 1 - 1.000 - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
78. pcsk7 ENSDARG00000069968 5 1 - - - - - - 1.000 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
79. CABZ01073334.1 CABZ01073334.1 1 1 - 1.000 - - - - - - -
80. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
81. USP43 USP43 14 1 - 1.000 - - - - - - -
82. il11b ENSDARG00000058557 17 1 - - - - - - 1.000 - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
83. btr22 ENSDARG00000100539 137 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
84. FAM46A FAM46A 81 1 - - - - - - 1.000 - -
85. CU694445.1 ENSDARG00000111931 7 1 - 1.000 - - - - - - -
86. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
87. BX324210.1 BX324210.1 0 1 - 1.000 - - - - - - -
88. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
89. DNM2 DNM2 2 1 - - - - - - - - 1.000
90. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
91. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
92. CT573433.2 CT573433.2 115 1 - 1.000 - - - - - - -
93. si:rp71-36d5.4 si:rp71-36d5.4 20 1 - - - - - - 1.000 - -
94. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
95. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
96. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
97. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
98. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
99. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
100. cers3b ENSDARG00000036337 1 1 - - - - - - 1.000 - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]

There are 1154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA