Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scarf1

Gene Name Gene ID Reads Annotation
scarf1 ENSDARG00000077285 108 scavenger receptor class F, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8778]










Genes with expression patterns similar to scarf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scarf1 ENSDARG00000077285 108 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class F, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8778]
2. bcat1 ENSDARG00000045568 39 1.778 - 0.851 - - - 0.927 - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
3. CCDC30 ENSDARG00000056961 178 1.778 - 0.807 - - - - 0.971 - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
4. ndufa4l2 153 1.741 - - - - 0.862 - 0.879 - - NDUFA4, mitochondrial complex associated like 2
5. si:dkey-261j4.4 ENSDARG00000035150 32 1.689 - 0.725 - - - 0.964 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
6. ARMC6 ENSDARG00000103770 39 1.687 - 0.862 - - - 0.825 - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
7. mak ENSDARG00000059287 144 1.623 0.762 - - - - - 0.861 - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
8. map4k2l_1 map4k2l_1 77 1.59 - 0.851 - - - 0.739 - - -
9. sesn1 ENSDARG00000020693 198 1.572 0.748 0.824 - - - - - - - sestrin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-408]
10. il4r il4r 75 1.569 0.796 - - - - 0.773 - - -
11. PEA15 ENSDARG00000079771 80 1.549 - 0.846 - - - - 0.703 - - proliferation and apoptosis adaptor protein 15 [Source:ZFIN;Acc:ZDB-GENE-170119-2]
12. VPRBP VPRBP 727 1.528 0.807 0.721 - - - - - - -
13. si:dkey-10f21.4 ENSDARG00000057743 247 1.522 - 0.784 - - - - 0.738 - - si:dkey-10f21.4 [Source:ZFIN;Acc:ZDB-GENE-070912-350]
14. nf2a ENSDARG00000020204 740 1.509 - 0.734 - - - 0.775 - - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
15. wnt11 ENSDARG00000004256, ENSDARG00000115343 331 1.504 - 0.719 - - - 0.785 - - - wingless-type MMTV integration site family, member 11 [Source:ZFIN;Acc:ZDB-GENE-990603-12]
16. PCDH12 ENSDARG00000076594 381 1.454 0.713 0.741 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
17. ptpn2a ENSDARG00000016481 493 1.414 - - - - - 0.706 0.708 - - protein tyrosine phosphatase, non-receptor type 2, a [Source:ZFIN;Acc:ZDB-GENE-040426-1196]
18. SYDE1 ENSDARG00000077440 4 0.964 - - - - - 0.964 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
19. CABZ01071407.1 CABZ01071407.1 6 0.964 - - - - - 0.964 - - -
20. DPEP1 ENSDARG00000068181 1 0.964 - - - - - 0.964 - - - dipeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-388]
21. il13 ENSDARG00000077809 8 0.964 - - - - - 0.964 - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
22. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.964 - - - - - 0.964 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
23. CR847893.4 CR847893.4 2 0.964 - - - - - 0.964 - - -
24. GPR35_1 GPR35_1 1 0.964 - - - - - 0.964 - - -
25. si:ch211-235f1.3 ENSDARG00000095179 27 0.964 - - - - - 0.964 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
26. slc5a12 ENSDARG00000005004 15 0.964 - - - - - 0.964 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
27. U1_41 U1_41 1 0.964 - - - - - 0.964 - - -
28. zgc:163061_1 ENSDARG00000075538, ENSDARG00000076766 18 0.964 - - - - - 0.964 - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
29. KCNH2 KCNH2 1 0.964 - - - - - 0.964 - - -
30. CT027762.3_1 CT027762.3_1 62 0.964 - - - - - 0.964 - - -
31. tmem237a ENSDARG00000041735 13 0.964 - - - - - 0.964 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
32. fam169b ENSDARG00000069321 5 0.964 - - - - - 0.964 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
33. anpepa ENSDARG00000041083, ENSDARG00000111591 5 0.964 - - - - - 0.964 - - - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
34. CABZ01033130.1 CABZ01033130.1 5 0.964 - - - - - 0.964 - - -
35. mhc1uma ENSDARG00000039164 16 0.964 - - - - - 0.964 - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
36. CMAS CMAS 10 0.964 - - - - - 0.964 - - -
37. cx23 ENSDARG00000054150 115 0.964 - - - - - 0.964 - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
38. zgc:174712 zgc:174712 47 0.964 - - - - - 0.964 - - -
39. PATL2 PATL2 10 0.964 - - - - - 0.964 - - -
40. dkk2 ENSDARG00000076420 553 0.964 - - - - - 0.964 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
41. GP9 ENSDARG00000090638 53 0.964 - - - - - 0.964 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
42. dpagt1 ENSDARG00000061061 3 0.964 - - - - - 0.964 - - - dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) [Source:ZFIN;Acc:ZDB-GENE-060526-18]
43. CR352230.1 CR352230.1 1 0.964 - - - - - 0.964 - - -
44. rhd ENSDARG00000002194 269 0.964 - - - - - 0.964 - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
45. cdc25d ENSDARG00000075599 7 0.964 - - - - - 0.964 - - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
46. viml ENSDARG00000044501 5 0.964 - - - - - 0.964 - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
47. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 0.964 - - - - - 0.964 - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
48. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 0.964 - - - - - 0.964 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
49. C11H3orf83 C11H3orf83 30 0.964 - - - - - 0.964 - - -
50. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.964 - - - - - 0.964 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
51. bbs9 ENSDARG00000079217 4 0.964 - - - - - 0.964 - - - Bardet-Biedl syndrome 9 [Source:ZFIN;Acc:ZDB-GENE-081027-4]
52. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 0.964 - - - - - 0.964 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
53. notchl ENSDARG00000088308 28 0.964 - - - - - 0.964 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
54. CR854855.2 CR854855.2 1 0.964 - - - - - 0.964 - - -
55. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.964 - - - - - 0.964 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
56. CR394546.2 ENSDARG00000090061 3 0.964 - - - - - 0.964 - - -
57. rest ENSDARG00000103046 51 0.964 - - - - - 0.964 - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
58. si:dkey-56m15.1 si:dkey-56m15.1 1 0.964 - - - - - 0.964 - - -
59. ovca2 ENSDARG00000103748 38 0.964 - - - - - 0.964 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
60. CABZ01016332.1 CABZ01016332.1 5 0.964 - - - - - 0.964 - - -
61. ftr26_1 ENSDARG00000092961 1 0.964 - - - - - 0.964 - - - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
62. CU302316.1 ENSDARG00000109600 2 0.964 - - - - - 0.964 - - -
63. BX470224.1 ENSDARG00000092793 22 0.963 - - - - - 0.963 - - -
64. C12H10orf107 C12H10orf107 8 0.96 - - - - - 0.960 - - -
65. C6H21orf58 C6H21orf58 14 0.945 - - - - - 0.945 - - -
66. vav3b ENSDARG00000073713, ENSDARG00000075962 26 0.944 - - - - - 0.944 - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
67. si:ch211-245h7.2 si:ch211-245h7.2 317 0.944 - - - - - 0.944 - - -
68. znfl2a ENSDARG00000008333 357 0.943 - - - - - 0.943 - - - zinc finger-like gene 2a [Source:ZFIN;Acc:ZDB-GENE-030828-7]
69. GPR158 GPR158 64 0.942 - - - - - 0.942 - - -
70. SDK2 SDK2 145 0.941 - 0.941 - - - - - - -
71. CACNA1H CACNA1H 34 0.935 - - - - - 0.935 - - -
72. CABZ01066695.1 CABZ01066695.1 12 0.935 - - - - - 0.935 - - -
73. CUZD1 CUZD1 2 0.935 - - - - - 0.935 - - -
74. CT583679.2 CT583679.2 10 0.935 - - - - - 0.935 - - -
75. KCNS1 KCNS1 24 0.933 - - - - - - 0.933 - -
76. C22H1orf53 C22H1orf53 24 0.933 - - - - - - 0.933 - -
77. dcaf15 ENSDARG00000077790 1039 0.925 - - - - - - 0.925 - - DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
78. APH1A APH1A 129 0.923 - - - - - 0.923 - - -
79. CABZ01007222.1 CABZ01007222.1 78 0.922 - - - - - - 0.922 - -
80. runx2b ENSDARG00000059233 106 0.919 - - - - - 0.919 - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
81. kcnt1 ENSDARG00000079484 45 0.918 - - - - - 0.918 - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
82. admb ENSDARG00000069027 67 0.917 - 0.917 - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
83. myt1la ENSDARG00000008209 120 0.917 - - - - - - 0.917 - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
84. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.916 - - - - - 0.916 - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
85. tmtc2 tmtc2 798 0.916 - 0.916 - - - - - - -
86. kal1b kal1b 495 0.916 - - - - - 0.916 - - -
87. pcsk2 ENSDARG00000019451 442 0.913 - - - - - - 0.913 - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
88. CABZ01061873.1 CABZ01061873.1 51 0.912 - - - - - - 0.912 - -
89. epor_1 ENSDARG00000090834 366 0.91 - - - - - 0.910 - - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
90. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.909 - - - - - 0.909 - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
91. KLHL14 ENSDARG00000045275 155 0.909 - - - - - - 0.909 - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
92. SLC29A3 ENSDARG00000077828 382 0.908 - 0.908 - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-081107-66]
93. epb41b ENSDARG00000029019 1472 0.908 - - - - - 0.908 - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
94. BEND2 BEND2 92 0.907 - - - - - - 0.907 - -
95. scin ENSDARG00000010728, ENSDARG00000111092 437 0.907 - - - - - - 0.907 - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
96. si:dkey-50i6.5 ENSDARG00000101320 95 0.907 - - - - - - 0.907 - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
97. gnaq ENSDARG00000011487 123 0.906 - - - - - - 0.906 - - guanine nucleotide binding protein (G protein), q polypeptide [Source:ZFIN;Acc:ZDB-GENE-081104-25]
98. grk1a ENSDARG00000058803 13 0.905 - - - - - 0.905 - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
99. BAIAP2 BAIAP2 88 0.905 - - - - - 0.905 - - -
100. mms19 ENSDARG00000079067 65 0.905 - - - - - 0.905 - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]

There are 818 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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