Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scara5

Gene Name Gene ID Reads Annotation
scara5 ENSDARG00000010425 84 scavenger receptor class A, member 5 (putative) [Source:ZFIN;Acc:ZDB-GENE-041210-258]










Genes with expression patterns similar to scara5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scara5 ENSDARG00000010425 84 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class A, member 5 (putative) [Source:ZFIN;Acc:ZDB-GENE-041210-258]
2. ICT1 356 1.544 0.770 - - - - 0.774 - - - immature colon carcinoma transcript 1
3. RUNDC3A RUNDC3A 204 1.482 - - 0.766 - - - 0.716 - -
4. trim101 ENSDARG00000018264 827 1.478 0.756 - - - - 0.722 - - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
5. bmpr1bb ENSDARG00000102742 1036 1.46 0.709 - - - - 0.751 - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
6. CR792456.1 CR792456.1 783 1.439 - 0.736 - - - 0.703 - - -
7. zgc:92880 zgc:92880 56 1.426 0.718 - - - - 0.708 - - -
8. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.931 0.931 - - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
9. CR524823.3 CR524823.3 124 0.915 - 0.915 - - - - - - -
10. si:ch211-209f23.3 ENSDARG00000095607 15 0.915 - 0.915 - - - - - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
11. asb11 ENSDARG00000056561 39 0.899 - - 0.899 - - - - - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
12. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.889 - 0.889 - - - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
13. si:ch211-135f11.1 166 0.885 - 0.885 - - - - - - - si:ch211-135f11.1, transcript variant X3
14. CR318595.2 CR318595.2 17 0.885 - 0.885 - - - - - - -
15. CDR2_1 CDR2_1 8 0.885 - 0.885 - - - - - - -
16. si:ch211-196f5.9 ENSDARG00000096451 70 0.885 - 0.885 - - - - - - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
17. sfr1 ENSDARG00000021974 45 0.883 - 0.883 - - - - - - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
18. Mar-01 Mar-01 176 0.881 - 0.881 - - - - - - -
19. hsd11b2 ENSDARG00000001975 245 0.881 - 0.881 - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
20. SNORA63_1 SNORA63_1 7 0.876 - - 0.876 - - - - - -
21. TTC17 ENSDARG00000044812 124 0.866 - - - - - - 0.866 - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
22. EMC7 ENSDARG00000012144 76 0.866 - - - - - - 0.866 - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
23. aqp4 ENSDARG00000010565 624 0.859 - - - - - 0.859 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
24. C2H1orf27 245 0.858 - - - - - - 0.858 - - c2h1orf27 homolog (H. sapiens), transcript variant X1
25. myo15aa ENSDARG00000075292 29 0.858 - 0.858 - - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
26. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.856 - 0.856 - - - - - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
27. reep1 ENSDARG00000014854 915 0.855 - - - - - - 0.855 - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
28. vgll2b ENSDARG00000053773 444 0.852 - - - - - - 0.852 - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
29. ttll5 ENSDARG00000036793 4 0.852 - - 0.852 - - - - - - tubulin tyrosine ligase-like family, member 5 [Source:ZFIN;Acc:ZDB-GENE-100922-236]
30. mblac2 ENSDARG00000059689 62 0.85 - - - - - 0.850 - - - metallo-beta-lactamase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-313]
31. foxf2a ENSDARG00000017195 345 0.846 - 0.846 - - - - - - - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
32. pdk3a ENSDARG00000014527 15 0.844 - - 0.844 - - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
33. si:ch211-241n15.3 ENSDARG00000088915 5 0.843 - - 0.843 - - - - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
34. si:ch211-117m20.4 ENSDARG00000094286 7 0.842 - - 0.842 - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
35. MYT1L MYT1L 5 0.84 - - 0.840 - - - - - -
36. LRRC38 LRRC38 5 0.84 - - 0.840 - - - - - -
37. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 0.84 - - 0.840 - - - - - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
38. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 0.84 - - 0.840 - - - - - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
39. CR847571.1 ENSDARG00000069362 4 0.84 - - 0.840 - - - - - - uncharacterized LOC110437789 [Source:NCBI gene;Acc:110437789]
40. si:dkey-14o1.18 si:dkey-14o1.18 23 0.84 - - 0.840 - - - - - -
41. ptx3b ENSDARG00000079515 10 0.84 - - 0.840 - - - - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
42. CCDC37 CCDC37 10 0.84 - - 0.840 - - - - - -
43. zgc:175136 ENSDARG00000103024 4 0.84 - - 0.840 - - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
44. jakmip2 ENSDARG00000053547 32 0.838 - - 0.838 - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
45. si:ch211-120e1.7 ENSDARG00000094634 14 0.838 - - 0.838 - - - - - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
46. pdk2 pdk2 32 0.837 - - 0.837 - - - - - -
47. tpgs2 ENSDARG00000011926 48 0.837 - 0.837 - - - - - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
48. BX321870.1 ENSDARG00000098519 9 0.837 - - 0.837 - - - - - -
49. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 0.836 - - 0.836 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
50. WDR89 ENSDARG00000077265 322 0.836 0.836 - - - - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
51. CR854827.2 ENSDARG00000097227 15 0.836 - - 0.836 - - - - - -
52. Mar-08 Mar-08 52 0.831 - 0.831 - - - - - - -
53. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 0.831 - 0.831 - - - - - - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
54. CABZ01036951.1 CABZ01036951.1 71 0.831 - 0.831 - - - - - - -
55. fads2 ENSDARG00000019532 152 0.831 - 0.831 - - - - - - - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
56. P2RY14 ENSDARG00000103305 41 0.831 - - - - - 0.831 - - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
57. loxhd1a ENSDARG00000094738 7 0.831 - - 0.831 - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
58. RASGRF2 RASGRF2 644 0.828 - 0.828 - - - - - - -
59. flj13639 ENSDARG00000010764 29 0.826 - - 0.826 - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
60. irak4 ENSDARG00000100534 108 0.826 - 0.826 - - - - - - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
61. srrd ENSDARG00000059028 173 0.824 - - - - - 0.824 - - - SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]
62. si:dkeyp-23e4.3 ENSDARG00000074819 42 0.824 - - 0.824 - - - - - - si:dkeyp-23e4.3 [Source:ZFIN;Acc:ZDB-GENE-091118-19]
63. si:ch73-269m14.3 ENSDARG00000096305 28 0.822 - - 0.822 - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
64. zgc:66350 zgc:66350 122 0.819 - 0.819 - - - - - - -
65. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 0.818 - - 0.818 - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
66. CNTNAP2A ENSDARG00000058969 97 0.817 - - 0.817 - - - - - - contactin associated protein like 2a [Source:ZFIN;Acc:ZDB-GENE-120328-3]
67. atrnl1a ENSDARG00000077188 66 0.816 - - - - - - 0.816 - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
68. si:dkey-118k5.3 ENSDARG00000087736 155 0.816 - - 0.816 - - - - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
69. ugt5b4 ENSDARG00000091916 130 0.813 - - 0.813 - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
70. arnt ENSDARG00000021855, ENSDARG00000115999 32 0.812 - - - - - 0.812 - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
71. si:dkey-208k4.1 si:dkey-208k4.1 15 0.812 - - 0.812 - - - - - -
72. rom1a ENSDARG00000019752 11 0.812 - - - - - 0.812 - - - retinal outer segment membrane protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1765]
73. si:dkey-197c15.6 ENSDARG00000079401 745 0.811 0.811 - - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
74. colq ENSDARG00000019692 656 0.811 - - - - - - 0.811 - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
75. zgc:174712 zgc:174712 47 0.81 - 0.810 - - - - - - -
76. CT737138.1 CT737138.1 26 0.81 - - - 0.810 - - - - -
77. tinf2 ENSDARG00000054473 391 0.809 - - - - - 0.809 - - - TERF1 (TRF1)-interacting nuclear factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6168]
78. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 0.809 - 0.809 - - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
79. capn3b ENSDARG00000043035, ENSDARG00000113539 229 0.809 0.809 - - - - - - - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
80. si:ch211-236p5.3 ENSDARG00000086418 138 0.808 - 0.808 - - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
81. mms19 ENSDARG00000079067 65 0.808 - 0.808 - - - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
82. si:dkey-191g9.5 ENSDARG00000056080 60 0.808 - 0.808 - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
83. zgc:113418 zgc:113418 58 0.808 - 0.808 - - - - - - -
84. FOLR1 FOLR1 25 0.807 - - - - - 0.807 - - -
85. six1a ENSDARG00000039304 1183 0.807 - - - - - - 0.807 - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
86. nacad ENSDARG00000012347 1268 0.807 - 0.807 - - - - - - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
87. chic1 ENSDARG00000053166 210 0.806 - 0.806 - - - - - - - cysteine-rich hydrophobic domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7763]
88. CU694315.1 CU694315.1 87 0.806 - 0.806 - - - - - - -
89. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.804 - 0.804 - - - - - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
90. si:ch211-113e8.9 ENSDARG00000095065 33 0.804 - 0.804 - - - - - - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
91. si:dkey-167i21.4 si:dkey-167i21.4 12 0.804 - - 0.804 - - - - - -
92. si:dkey-103i16.6 ENSDARG00000062893, ENSDARG00000116729 108 0.803 - 0.803 - - - - - - - si:dkey-103i16.6 [Source:ZFIN;Acc:ZDB-GENE-061207-46]
93. ptpn6 ENSDARG00000089043 168 0.803 - - 0.803 - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
94. GJD4 ENSDARG00000116895 139 0.802 0.802 - - - - - - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
95. tm4sf4 ENSDARG00000040747 65 0.802 - - 0.802 - - - - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
96. si:ch211-81a5.8 ENSDARG00000070972 59 0.802 - 0.802 - - - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
97. FP102801.1_1 FP102801.1_1 238 0.801 - - - - - - 0.801 - -
98. TECPR1 TECPR1 173 0.801 - - - - - 0.801 - - -
99. EOGT ENSDARG00000022853 366 0.8 - - - - - - 0.800 - - EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [Source:ZFIN;Acc:ZDB-GENE-120813-8]
100. zgc:162576 zgc:162576 56 0.8 0.800 - - - - - - - -

There are 410 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA