Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scamp4

Gene Name Gene ID Reads Annotation
scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]










Genes with expression patterns similar to scamp4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
2. slc45a4 ENSDARG00000077326 481 2.362 - 0.793 - - - 0.820 0.749 - - solute carrier family 45, member 4 [Source:ZFIN;Acc:ZDB-GENE-091230-5]
3. mir203a 1519 2.267 0.746 - - - - 0.796 0.725 - - microRNA 203a
4. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.845 - - - - - - 0.917 0.928 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
5. GGT7 ENSDARG00000115805 481 1.84 - - - - - - 0.902 0.938 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
6. zgc:171971 ENSDARG00000042054 388 1.81 - - - - - - 0.881 0.929 - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
7. coro2a ENSDARG00000005210 1479 1.792 - - - - - - 0.942 0.850 - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
8. tfap2c ENSDARG00000040606 4628 1.7 - - - - - - 0.747 0.953 - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
9. clic1 ENSDARG00000103340 2235 1.693 - - - - - - 0.761 0.932 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
10. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.69 0.757 - - - - - - 0.933 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
11. snx27a ENSDARG00000033804 2249 1.677 - 0.742 - - - - - 0.935 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
12. arpc1a ENSDARG00000008383 7353 1.673 - 0.726 - - - - - 0.947 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
13. cpla2 cpla2 1031 1.663 - - - - - - 0.721 0.942 -
14. araf ENSDARG00000054533 1132 1.644 0.707 - - - - - - 0.937 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
15. trpm4 trpm4 501 1.626 - - - - - 0.745 0.881 - -
16. kansl1a ENSDARG00000090895 2593 1.624 - - - - - 0.735 - 0.889 - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
17. galnt12 ENSDARG00000055490 1653 1.624 - - - - - 0.808 0.816 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
18. prelid1a ENSDARG00000098671 4745 1.612 - - - - - - 0.772 0.840 - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
19. si:dkey-11f4.14 ENSDARG00000098461 35 1.61 - - - - - 0.723 0.887 - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
20. C21H5orf15 C21H5orf15 2318 1.579 0.825 - - - - - 0.754 - -
21. chmp4b chmp4b 5318 1.579 - - - - - - 0.717 0.862 -
22. rrbp1a ENSDARG00000013763 4723 1.572 - - - - - - 0.775 0.797 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
23. si:ch211-179l5.5 si:ch211-179l5.5 249 1.57 0.741 - - - - - 0.829 - -
24. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.553 - 0.734 - - - - 0.819 - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
25. ppp1cc 2361 1.547 - - - - - - 0.708 0.839 - protein phosphatase 1, catalytic subunit, gamma isozyme
26. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.543 - 0.747 - - - - - 0.796 - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
27. EPS8L1 891 1.54 0.755 - - - - - 0.785 - - eps8-like1, transcript variant X3
28. lonp2 ENSDARG00000101438 179 1.539 - - - - - 0.704 0.835 - - lon peptidase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041212-1]
29. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.537 0.802 0.735 - - - - - - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
30. alox5 alox5 406 1.529 - - - - - 0.715 0.814 - -
31. rab11fip1b ENSDARG00000036462 466 1.527 - 0.741 - - - - 0.786 - - RAB11 family interacting protein 1 (class I) b [Source:ZFIN;Acc:ZDB-GENE-091204-322]
32. aldh3b1 ENSDARG00000013839 796 1.527 - - - - - 0.762 0.765 - - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
33. dnmbp ENSDARG00000074121 2711 1.515 - 0.763 - - - - 0.752 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
34. CABZ01054962.1 CABZ01054962.1 91 1.514 - - - - - 0.729 0.785 - -
35. atp7a ENSDARG00000003699 476 1.512 0.726 - - - - - 0.786 - - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
36. MDFIC ENSDARG00000074223 781 1.494 - - - - - 0.779 0.715 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
37. CNNM2 CNNM2 225 1.494 0.727 - - - - 0.767 - - -
38. srrm2 ENSDARG00000037965 1967 1.488 - 0.719 - - - 0.769 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
39. man1b1 man1b1 3294 1.487 - - - - - 0.784 0.703 - -
40. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 1.483 - 0.707 - - - - 0.776 - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
41. foxred2 ENSDARG00000061354 718 1.481 - 0.769 - - - - 0.712 - - FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
42. psmd4b ENSDARG00000023279 2002 1.48 - - - - - - 0.767 - 0.713 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
43. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 1.47 - - - - - 0.769 0.701 - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
44. serpinb1l3 ENSDARG00000014556 378 1.465 - 0.733 - - - - 0.732 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7059]
45. bmp4 ENSDARG00000019995 2038 1.459 - 0.737 - - - - 0.722 - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
46. COL7A1 ENSDARG00000021720 2210 1.452 0.705 - - - - 0.747 - - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
47. polr2a ENSDARG00000099966 5706 1.451 - - - - - 0.743 0.708 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
48. krt17 ENSDARG00000094041 7683 1.423 - - - - - - 0.714 0.709 - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
49. padi2 ENSDARG00000044167 6765 1.409 - - - - - - 0.708 0.701 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
50. MAN2A2 ENSDARG00000063101 922 0.974 - - - - - - - 0.974 - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
51. srebf2 ENSDARG00000063438 1982 0.974 - - - - - - - 0.974 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
52. slc7a6os ENSDARG00000010596 1599 0.969 - - - - - - - 0.969 - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
53. BX470254.1 ENSDARG00000097402 1389 0.962 - - - - - - - 0.962 -
54. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.957 - - - - - - - 0.957 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
55. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.956 - - - - - - - 0.956 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
56. dusp7 ENSDARG00000101413 1307 0.954 - - - - - - - 0.954 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
57. map3k1 ENSDARG00000098405 3043 0.953 - - - - - - - 0.953 - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
58. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.951 - - - - - - - 0.951 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
59. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.951 - - - - - - - 0.951 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
60. ell ENSDARG00000000568 1404 0.95 - - - - - - - 0.950 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
61. st6gal2 st6gal2 1570 0.95 - - - - - - - 0.950 -
62. drg2 ENSDARG00000006642 1167 0.95 - - - - - - - 0.950 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
63. smyd5 ENSDARG00000071669 1194 0.95 - - - - - - - 0.950 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
64. agtr1b ENSDARG00000045443 232 0.95 - - - - - - - 0.950 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
65. RIN3 ENSDARG00000077618 745 0.95 - - - - - - - 0.950 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
66. elovl6l ENSDARG00000038639 1184 0.949 - - - - - - - 0.949 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
67. hcst ENSDARG00000092074 172 0.949 - - - - - - - 0.949 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
68. slc6a11a ENSDARG00000074002 189 0.949 - - - - - - - 0.949 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
69. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.949 - - - - - - - 0.949 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
70. PARP14 PARP14 164 0.949 - - - - - - - 0.949 -
71. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.948 - - - - - - - 0.948 -
72. myo9b ENSDARG00000077410 1956 0.948 - - - - - - - 0.948 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
73. CABZ01073405.1 CABZ01073405.1 275 0.948 - - - - - - - 0.948 -
74. ftr23 ENSDARG00000067985 254 0.948 - - - - - - - 0.948 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
75. zgc:113019 ENSDARG00000099743 994 0.948 - - - - - - - 0.948 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
76. golga4 ENSDARG00000075331 447 0.948 - - - - - - - 0.948 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
77. hsd17b4 ENSDARG00000101239 301 0.947 - - - - - - - 0.947 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
78. si:dkey-238o14.5 si:dkey-238o14.5 450 0.947 - - - - - - - 0.947 -
79. wscd2 ENSDARG00000061819 304 0.947 - - - - - - - 0.947 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
80. kmt2d ENSDARG00000037060 1232 0.947 - - - - - - - 0.947 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
81. pir ENSDARG00000056638 722 0.946 - - - - - - - 0.946 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
82. TAF4 TAF4 658 0.945 - - - - - - - 0.945 -
83. csf1a ENSDARG00000075343 548 0.945 - - - - - - - 0.945 - colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]
84. cxxc1l cxxc1l 1035 0.945 - - - - - - - 0.945 -
85. agk ENSDARG00000009837, ENSDARG00000113514 811 0.945 - - - - - - - 0.945 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
86. usp1 ENSDARG00000056414 1816 0.945 - - - - - - - 0.945 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
87. prelid1b ENSDARG00000044169 501 0.945 - - - - - - - 0.945 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
88. C6H1orf159 C6H1orf159 406 0.945 - - - - - - - 0.945 -
89. lepre1 lepre1 5346 0.944 - - - - - - - 0.944 -
90. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.944 - - - - - - - 0.944 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
91. si:dkey-204f11.64 ENSDARG00000094695 586 0.944 - - - - - - - 0.944 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
92. rdh12 ENSDARG00000018069 396 0.944 - - - - - - - 0.944 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
93. si:dkey-56e3.2 ENSDARG00000092551 835 0.944 - - - - - - - 0.944 - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
94. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.943 - - - - - - - 0.943 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
95. vps4b ENSDARG00000069175 1922 0.943 - - - - - - - 0.943 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
96. slc30a9 ENSDARG00000057272 766 0.943 - - - - - - - 0.943 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
97. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.943 - - - - - - - 0.943 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
98. TUBGCP6 1991 0.943 - - - - - - - 0.943 - tubulin, gamma complex associated protein 6
99. USP6 USP6 613 0.943 - - - - - - - 0.943 -
100. si:dkey-38p12.2 si:dkey-38p12.2 504 0.942 - - - - - - - 0.942 -

There are 1140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA