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Results for scaf4b

Gene Name Gene ID Reads Annotation
scaf4b ENSDARG00000018854 734 SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]










Genes with expression patterns similar to scaf4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scaf4b ENSDARG00000018854 734 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
2. ubl3b ENSDARG00000021556 1210 2.322 - 0.756 - - - - 0.747 0.819 - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
3. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 2.292 0.855 - - - - - 0.724 0.713 - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
4. si:dkey-57k17.1 ENSDARG00000104697 442 1.863 0.904 - - - - - - 0.959 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
5. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.782 - - - - - - 0.889 0.893 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
6. wrap53 ENSDARG00000086150 975 1.755 - - - - - - 0.885 0.870 - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
7. trabd ENSDARG00000010445 195 1.742 0.779 - - - - - - 0.963 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
8. vangl1 ENSDARG00000004305 335 1.733 0.823 - - - - - - 0.910 - VANGL planar cell polarity protein 1 [Source:ZFIN;Acc:ZDB-GENE-040621-2]
9. igdcc4 ENSDARG00000076919 1303 1.73 - - - - - - 0.783 0.947 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
10. LPHN3 LPHN3 195 1.703 - 0.745 - - - - - 0.958 -
11. si:dkey-11f4.16 ENSDARG00000099799 121 1.698 - - - - - - 0.736 0.962 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
12. mon1a ENSDARG00000078585 554 1.692 - 0.766 - - - - - 0.926 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
13. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.692 - - - - - - 0.781 0.911 - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
14. stmn4 ENSDARG00000030106 518 1.689 - 0.736 - - - - - 0.953 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
15. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 1.683 - 0.721 - - - - - 0.962 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
16. pet112 pet112 223 1.674 - 0.734 - - - - - 0.940 -
17. pggt1b ENSDARG00000103464 441 1.667 - 0.701 - - - - - 0.966 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
18. TSHZ2 ENSDARG00000079201 301 1.666 - - - - - - 0.721 0.945 - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
19. phf21ab ENSDARG00000021378 1706 1.659 - - - - - 0.789 - 0.870 - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
20. sh3pxd2b ENSDARG00000103251 1469 1.657 0.830 0.827 - - - - - - - SH3 and PX domains 2B [Source:ZFIN;Acc:ZDB-GENE-060810-52]
21. ripk4 ENSDARG00000043211 775 1.652 - 0.705 - - - - - 0.947 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
22. lancl1 ENSDARG00000013741 563 1.641 - - - - - - 0.726 0.915 - LanC antibiotic synthetase component C-like 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040924-1]
23. ESAM ESAM 123 1.64 0.839 - - - - - 0.801 - -
24. prpsap2 ENSDARG00000019326 1463 1.635 0.805 - - - - - 0.830 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
25. proza ENSDARG00000037783, ENSDARG00000116864 500 1.628 - - - - - - 0.736 0.892 - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
26. REXO4 ENSDARG00000088619 655 1.627 - - - - - - 0.714 0.913 - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
27. dus1l ENSDARG00000089260 336 1.616 - - - - - - 0.831 0.785 - dihydrouridine synthase 1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1435]
28. zgc:165653 ENSDARG00000104713 1603 1.615 - 0.779 - - - - - 0.836 - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
29. ical1 ENSDARG00000057688 357 1.608 0.848 0.760 - - - - - - - islet cell autoantigen 1-like [Source:ZFIN;Acc:ZDB-GENE-030910-4]
30. kctd16b ENSDARG00000020102 83 1.607 0.745 - - - - - - 0.862 - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
31. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.59 - 0.828 - - - - 0.762 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
32. si:dkeyp-73a2.2 ENSDARG00000079785 313 1.561 0.787 - - - - - 0.774 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
33. nab1b ENSDARG00000040700 289 1.558 - 0.758 - - - - 0.800 - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
34. NUP85 ENSDARG00000098679 804 1.543 - - - - - 0.743 0.800 - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
35. CU683898.1 CU683898.1 203 1.535 0.792 - - - - - 0.743 - -
36. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.533 0.783 - - - - - - 0.750 - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
37. prkcbb ENSDARG00000022254 319 1.532 0.776 - - - - - - 0.756 - protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
38. smurf2 ENSDARG00000038067 2057 1.532 - 0.828 - 0.704 - - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
39. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 1.531 - 0.812 - - - - - 0.719 - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
40. ap3m2 ENSDARG00000016128 851 1.526 - 0.742 - - - - - - 0.784 adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
41. TP53BP2 TP53BP2 217 1.519 - 0.769 - - - - 0.750 - -
42. PLXNB2_1 PLXNB2_1 10 1.515 0.795 - - - - - 0.720 - -
43. si:ch211-89f22.1 si:ch211-89f22.1 11 1.5 0.789 0.711 - - - - - - -
44. cgna ENSDARG00000055607 11 1.5 0.789 0.711 - - - - - - - cingulin a [Source:ZFIN;Acc:ZDB-GENE-100921-78]
45. tmem248 ENSDARG00000018825 1560 1.494 - 0.757 - - - - 0.737 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
46. CCDC135 ENSDARG00000100231 48 1.491 0.764 - - - - - 0.727 - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
47. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.485 - 0.718 - - - - 0.767 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
48. gins4 ENSDARG00000016044 671 1.474 0.721 0.753 - - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
49. cyb5r2 ENSDARG00000051925 304 1.469 - - - - - - 0.751 0.718 - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
50. sfi1 ENSDARG00000053992 1075 1.459 - 0.754 - - - - 0.705 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
51. postna ENSDARG00000043806 143 1.459 - 0.743 - - - - 0.716 - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
52. si:dkey-46m10.3 si:dkey-46m10.3 246 1.453 0.711 - - - - - 0.742 - -
53. SEMA4C ENSDARG00000079611 610 1.44 - 0.713 - - - - 0.727 - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
54. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.428 - 0.717 - - - - 0.711 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
55. si:dkey-18f7.2 si:dkey-18f7.2 895 1.427 - - - - - - 0.710 0.717 -
56. CU104697.1 CU104697.1 19 1.412 - 0.702 - - - - 0.710 - -
57. si:dkey-29n10.3 si:dkey-29n10.3 66 0.97 - - - - - - - 0.970 -
58. rad23aa ENSDARG00000020001 374 0.97 - - - - - - - 0.970 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
59. CABZ01087562.1 CABZ01087562.1 80 0.968 - - - - - - - 0.968 -
60. elp3 ENSDARG00000042005 936 0.968 - - - - - - - 0.968 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
61. fam63b 484 0.967 - - - - - - - 0.967 - family with sequence similarity 63, member B
62. fbxo7 ENSDARG00000099833 304 0.967 - - - - - - - 0.967 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
63. SNAPC2 ENSDARG00000036473 158 0.966 - - - - - - - 0.966 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
64. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.966 - - - - - - - 0.966 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
65. si:dkey-266m15.6 ENSDARG00000078508 490 0.966 - - - - - - - 0.966 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
66. JAKMIP3 ENSDARG00000100708 56 0.965 - - - - - - - 0.965 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
67. si:ch211-67e16.2 41 0.965 - - - - - - - 0.965 - si:ch211-67e16.2, transcript variant X2
68. CR848836.5 CR848836.5 42 0.965 - - - - - - - 0.965 -
69. fhl1b ENSDARG00000056653 577 0.965 - - - - - - - 0.965 - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
70. chrna2b ENSDARG00000057025 217 0.965 - - - - - - - 0.965 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
71. slc2a8 ENSDARG00000104278 764 0.965 - - - - - - - 0.965 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
72. si:ch73-67c22.3 si:ch73-67c22.3 30 0.965 - - - - - - - 0.965 -
73. si:ch211-106h4.9 ENSDARG00000075706 36 0.965 - - - - - - - 0.965 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
74. CR936337.1 CR936337.1 38 0.965 - - - - - - - 0.965 -
75. rint1 ENSDARG00000005547 898 0.965 - - - - - - - 0.965 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
76. BX682234.2 BX682234.2 28 0.965 - - - - - - - 0.965 -
77. FCHSD2 FCHSD2 35 0.965 - - - - - - - 0.965 -
78. dnah9l ENSDARG00000062630 268 0.964 - - - - - - - 0.964 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
79. si:ch211-254c8.2 233 0.964 - - - - - - - 0.964 - si:ch211-254c8.2, transcript variant X4
80. sv2ba ENSDARG00000057427 33 0.964 - - - - - - - 0.964 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
81. htra3a ENSDARG00000052895 28 0.964 - - - - - - - 0.964 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
82. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.964 - - - - - - - 0.964 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
83. styx ENSDARG00000057699 48 0.964 - - - - - - - 0.964 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
84. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.964 - - - - - - - 0.964 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
85. gcdhl gcdhl 38 0.963 - - - - - - - 0.963 -
86. si:dkey-10g2.5 si:dkey-10g2.5 72 0.963 - - - - - - - 0.963 -
87. mlh1 ENSDARG00000025948 130 0.963 - - - - - - - 0.963 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
88. STIM2 STIM2 644 0.963 - - - - - - - 0.963 -
89. cx28.8 ENSDARG00000071042 62 0.962 - - - - - - - 0.962 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
90. cacnb2a ENSDARG00000099045 374 0.962 - - - - - - - 0.962 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
91. aars2 ENSDARG00000107385 190 0.962 - - - - - - - 0.962 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
92. phf19 ENSDARG00000078050 117 0.962 - - - - - - - 0.962 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
93. CABZ01114089.1 CABZ01114089.1 127 0.961 - - - - - - - 0.961 -
94. rab20 ENSDARG00000005049 346 0.961 - - - - - - - 0.961 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
95. mknk1 ENSDARG00000018411 749 0.96 - - - - - - - 0.960 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
96. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.96 - - - - - - - 0.960 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
97. hey2 ENSDARG00000013441 540 0.96 - - - - - - - 0.960 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
98. zgc:66474 ENSDARG00000026453 784 0.96 - - - - - - - 0.960 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
99. clip2 ENSDARG00000059596 529 0.959 - - - - - - - 0.959 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
100. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.959 - - - - - - - 0.959 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]

There are 1435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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