Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sc:d0139

Gene Name Gene ID Reads Annotation
sc:d0139 sc:d0139 233










Genes with expression patterns similar to sc:d0139

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sc:d0139 sc:d0139 233 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. nr1d2b ENSDARG00000009594 1144 2.395 0.704 - - - - 0.958 - 0.733 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
3. SLC22A15 ENSDARG00000055445 111 1.9 0.909 - - - - 0.991 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
4. si:dkey-115f9.2 si:dkey-115f9.2 18 1.893 - - - - - 0.995 0.898 - -
5. slc6a19b ENSDARG00000056719 140 1.893 - - - - - 0.995 0.898 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
6. CLCN2 CLCN2 8 1.854 0.956 - - - - - 0.898 - -
7. CIR1 ENSDARG00000099733 66 1.853 - - - 0.858 - 0.995 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
8. CZv9_NA429H14orf28 CZv9_NA429H14orf28 157 1.825 - 0.938 - - - - 0.887 - -
9. coa5 ENSDARG00000094833 1988 1.812 - - - - - 0.893 - 0.919 - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
10. ube2j1 ENSDARG00000033489 497 1.794 0.803 - - - - 0.991 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
11. sfr1 ENSDARG00000021974 45 1.774 - 0.901 0.873 - - - - - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
12. CABZ01049802.1 CABZ01049802.1 195 1.766 0.804 - - - - 0.962 - - -
13. si:ch73-386o14.1 si:ch73-386o14.1 82 1.758 - - 0.875 - - - 0.883 - -
14. cabp5a ENSDARG00000002576 14 1.758 - 0.860 - - - - 0.898 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
15. dhrs13a.2 ENSDARG00000111240 491 1.734 - - - 0.755 - 0.979 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
16. cdkn2c ENSDARG00000057610 179 1.731 0.784 - - - - 0.947 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
17. PEX5L PEX5L 179 1.727 - - 0.888 0.839 - - - - -
18. abl2 ENSDARG00000013841 145 1.717 0.885 - - 0.832 - - - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
19. GCNT7 ENSDARG00000040608 91 1.706 - - - - - 0.981 0.725 - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
20. kcnj13 ENSDARG00000043443 700 1.695 - - - - - 0.852 0.843 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
21. CABZ01027552.1 CABZ01027552.1 760 1.694 0.748 - - - - 0.946 - - -
22. dzip1l ENSDARG00000074265 61 1.688 0.822 - - - - - 0.866 - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
23. dennd1b ENSDARG00000101868 328 1.684 - - - - - 0.954 - 0.730 - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
24. CABZ01084815.1 CABZ01084815.1 351 1.679 - - 0.705 - - 0.974 - - -
25. gbas gbas 735 1.677 - - - 0.752 - 0.925 - - -
26. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.676 - - - - - 0.948 0.728 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
27. nlgn3a ENSDARG00000104786 91 1.664 - - 0.826 0.838 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
28. LARS2 ENSDARG00000075337 181 1.663 0.948 - - 0.715 - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
29. rassf9 ENSDARG00000074721 448 1.656 0.704 - - - - 0.952 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
30. ppp1r12c ENSDARG00000052423 183 1.648 0.934 - - 0.714 - - - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
31. tmem68 ENSDARG00000086737 209 1.646 0.905 - - 0.741 - - - - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
32. si:ch211-113a14.17 15 1.639 - 0.741 - - - - 0.898 - - si:ch211-113a14.17
33. coch ENSDARG00000024032 7 1.639 - 0.741 - - - - 0.898 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
34. 5_8S_rRNA 5_8S_rRNA 24 1.639 - 0.741 - - - - 0.898 - -
35. CABZ01057013.1 CABZ01057013.1 1308 1.638 - - - 0.752 - 0.886 - - -
36. atg9a ENSDARG00000044551 179 1.637 - 0.714 - - - 0.923 - - - ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]
37. AKNA ENSDARG00000087110 39 1.63 0.889 0.741 - - - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
38. im:7154842 im:7154842 434 1.628 - - - - - 0.924 0.704 - -
39. HPS6 265 1.609 0.861 - - 0.748 - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
40. tspan18b ENSDARG00000015015 1433 1.608 - - - - - 0.862 0.746 - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
41. CR790368.1 ENSDARG00000100936 20 1.603 - 0.741 - 0.862 - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
42. SNORD18_2 SNORD18_2 7 1.602 - - 0.704 - - - 0.898 - -
43. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1.602 - 0.828 0.774 - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
44. si:ch211-42d10.5 si:ch211-42d10.5 17 1.596 - - 0.883 - - - 0.713 - -
45. ypel2a ENSDARG00000077224 242 1.595 0.823 - - - - - 0.772 - - yippee-like 2a [Source:ZFIN;Acc:ZDB-GENE-091118-98]
46. msxd msxd 1750 1.572 0.804 - - - - 0.768 - - -
47. ppp1r13bb ENSDARG00000009142 1175 1.566 0.774 - - - - 0.792 - - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
48. cyp7c1 cyp7c1 1214 1.561 0.745 - - - - 0.816 - - -
49. trabd ENSDARG00000010445 195 1.56 0.803 - - - - - 0.757 - - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
50. CORIN ENSDARG00000101281 654 1.553 - - - 0.749 - 0.804 - - - corin, serine peptidase [Source:ZFIN;Acc:ZDB-GENE-060224-3]
51. NACC2 160 1.548 - 0.741 - 0.807 - - - - - NACC family member 2
52. luzp2 ENSDARG00000068247 80 1.547 - - 0.713 0.834 - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
53. par1 par1 564 1.537 - 0.740 - 0.797 - - - - -
54. C17H14orf159 128 1.531 - 0.721 0.810 - - - - - - c17h14orf159 homolog (H. sapiens)
55. avpr2ab ENSDARG00000029219 97 1.525 - - - - - - 0.799 0.726 - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
56. CR387997.1 CR387997.1 190 1.524 - - 0.782 - - - 0.742 - -
57. got2a ENSDARG00000041068, ENSDARG00000114282 693 1.513 0.773 - - - - - - 0.740 - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
58. mrpl40 ENSDARG00000043554 2198 1.507 - - - - - 0.763 - 0.744 - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
59. zgc:64106 ENSDARG00000011371 673 1.504 0.786 - - - - 0.718 - - - zgc:64106 [Source:ZFIN;Acc:ZDB-GENE-040426-1370]
60. BX005272.1 BX005272.1 553 1.503 - 0.728 - 0.775 - - - - -
61. hibch ENSDARG00000054867 885 1.5 - - - - - 0.710 - 0.790 - 3-hydroxyisobutyryl-CoA hydrolase [Source:ZFIN;Acc:ZDB-GENE-050327-29]
62. bpgm ENSDARG00000070826 582 1.499 - 0.720 - - - - 0.779 - - 2,3-bisphosphoglycerate mutase [Source:ZFIN;Acc:ZDB-GENE-040718-375]
63. LRRC61 ENSDARG00000077357 55 1.496 - - - 0.796 - - 0.700 - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
64. SH2D6 SH2D6 26 1.489 - - 0.743 - - - 0.746 - -
65. CT030712.1 ENSDARG00000044355 83 1.48 - 0.732 0.748 - - - - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
66. TDRD7B ENSDARG00000077523 124 1.472 - 0.732 0.740 - - - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
67. pde12 ENSDARG00000030964 615 1.462 - 0.747 - 0.715 - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
68. PLA2R1 ENSDARG00000077474 45 1.455 - 0.741 0.714 - - - - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
69. ZNF337_6 ZNF337_6 898 1.44 - 0.712 - - - - - 0.728 -
70. oip5 ENSDARG00000093597 329 1.419 - - 0.702 - - - 0.717 - - opa interacting protein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-328]
71. hgfa ENSDARG00000045544 225 1.419 - - - 0.717 - - 0.702 - - hepatocyte growth factor a [Source:ZFIN;Acc:ZDB-GENE-041014-2]
72. kdr ENSDARG00000017321 31 1 1.000 - - - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
73. CU929417.2 CU929417.2 94 0.997 - - - - - 0.997 - - -
74. pcgf5b ENSDARG00000052388 163 0.996 - - - - - 0.996 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
75. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.996 - - - - - 0.996 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
76. ccdc173 ENSDARG00000077928 260 0.996 - - - - - 0.996 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
77. CU302436.3 CU302436.3 174 0.996 - - - - - 0.996 - - -
78. si:dkey-57h18.2 33 0.995 - - - - - 0.995 - - - si:dkey-57h18.2, transcript variant X1
79. CABZ01072083.1 CABZ01072083.1 56 0.995 - - - - - 0.995 - - -
80. CR759791.3 CR759791.3 134 0.995 - - - - - 0.995 - - -
81. crybb3 ENSDARG00000041301 48 0.995 - - - - - 0.995 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
82. TDRD15 TDRD15 46 0.995 - - - - - 0.995 - - -
83. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.995 - - - - - 0.995 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
84. CR759816.1 ENSDARG00000098977 27 0.995 - - - - - 0.995 - - -
85. zgc:110286 92 0.994 - - - - - 0.994 - - - zgc:110286
86. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.994 - - - - - 0.994 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
87. znf750 ENSDARG00000102267 327 0.994 - - - - - 0.994 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
88. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.994 - - - - - 0.994 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
89. traf2b ENSDARG00000101036 429 0.994 - - - - - 0.994 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
90. ankrd39 ENSDARG00000041350 73 0.994 - - - - - 0.994 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
91. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.994 - - - - - 0.994 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
92. bace2 ENSDARG00000044781 17 0.994 - - - - - 0.994 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
93. CCDC64B CCDC64B 337 0.993 - - - - - 0.993 - - -
94. rhoab ENSDARG00000094673 26 0.993 - - - - - 0.993 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
95. tmem53 ENSDARG00000038789 411 0.993 - - - - - 0.993 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
96. egr3 ENSDARG00000089156 71 0.993 - - - - - 0.993 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
97. si:ch211-105d18.6 si:ch211-105d18.6 59 0.992 - - - - - 0.992 - - -
98. slco2a1 ENSDARG00000061896 58 0.992 - - - - - 0.992 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
99. inhbab ENSDARG00000024759 29 0.992 - - - - - 0.992 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
100. CU929328.1 ENSDARG00000105332 31 0.992 - - - - - 0.992 - - -

There are 1966 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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