Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sarm1

Gene Name Gene ID Reads Annotation
sarm1 ENSDARG00000010610 387 sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]










Genes with expression patterns similar to sarm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sarm1 ENSDARG00000010610 387 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]
2. cnrip1a ENSDARG00000091683 1491 1.7 - 0.922 - - - 0.778 - - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
3. vsnl1a ENSDARG00000023228 1584 1.699 - 0.953 - - - 0.746 - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
4. atp2b3b ENSDARG00000023445 1424 1.68 - 0.918 - - - 0.762 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
5. pcsk1nl ENSDARG00000076170 1232 1.674 - 0.936 - - - 0.738 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
6. cers6 ENSDARG00000053583 247 1.671 - 0.937 - - - 0.734 - - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
7. B4GALNT1 B4GALNT1 352 1.668 - 0.936 - - - 0.732 - - -
8. dpysl5a ENSDARG00000011141 1827 1.664 - 0.911 - - - 0.753 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
9. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.649 - 0.927 - - - 0.722 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
10. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.648 - 0.937 - - - 0.711 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
11. fam110b ENSDARG00000088073 420 1.639 - - - - - 0.746 0.893 - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
12. TUSC5 TUSC5 1436 1.636 - 0.866 - - - 0.770 - - -
13. thsd7ba ENSDARG00000095022 231 1.628 - 0.858 - - - 0.770 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
14. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.626 - 0.870 - 0.756 - - - - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
15. lrrc4.1 ENSDARG00000069402 323 1.615 - 0.880 - - - 0.735 - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
16. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.615 - - - - - 0.830 0.785 - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
17. mapk12b ENSDARG00000006409 2246 1.612 - 0.877 - - - 0.735 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
18. TUBB8P7_1 TUBB8P7_1 2722 1.612 - 0.847 - 0.765 - - - - -
19. si:dkeyp-53d3.6 204 1.609 - - - 0.740 - 0.869 - - - si:dkeyp-53d3.6, transcript variant X1
20. syt11a ENSDARG00000057913 1145 1.599 - 0.871 - - - 0.728 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
21. bach2b ENSDARG00000004074 1079 1.587 - 0.735 - - - 0.852 - - - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
22. MAP6 MAP6 643 1.581 - 0.848 - - - 0.733 - - -
23. si:ch73-21g5.7 ENSDARG00000093156 9412 1.563 - 0.849 - - - 0.714 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
24. PMFBP1 ENSDARG00000101917 292 1.562 - 0.808 - - - 0.754 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
25. pax3a ENSDARG00000010192 626 1.549 - 0.799 - - - 0.750 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
26. prpf31 ENSDARG00000095904 526 1.549 - 0.802 - - - 0.747 - - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
27. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.546 - 0.812 - - - 0.734 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
28. nptx1l ENSDARG00000074671 569 1.539 - 0.736 - - - 0.803 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
29. ppip5k2 ENSDARG00000078441 1074 1.539 - - - - - 0.714 0.825 - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
30. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.531 - 0.743 - - - 0.788 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
31. zic4 ENSDARG00000031307 1228 1.53 - 0.824 - - - 0.706 - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
32. asb7 ENSDARG00000006494 1387 1.526 0.768 0.758 - - - - - - - ankyrin repeat and SOCS box containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2429]
33. pknox1.1_1 ENSDARG00000018765 203 1.525 - - - - - 0.791 0.734 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
34. si:dkey-245p14.4 ENSDARG00000070320 418 1.524 - 0.747 - - - 0.777 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
35. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 1.521 - 0.757 - 0.764 - - - - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
36. stxbp1a ENSDARG00000001994 5154 1.52 - 0.785 - - - 0.735 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
37. BACH1 BACH1 1021 1.519 - - - 0.754 - 0.765 - - -
38. tnika ENSDARG00000056218 728 1.509 - 0.780 - - - 0.729 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
39. sox2 ENSDARG00000070913 2763 1.508 - 0.789 - - - 0.719 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
40. e4f1 ENSDARG00000038243 160 1.502 - - - 0.802 - 0.700 - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
41. stmn2a ENSDARG00000033234 2272 1.501 - 0.765 - - - 0.736 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
42. LRRN3 LRRN3 261 1.501 - 0.776 - 0.725 - - - - -
43. dtnbb ENSDARG00000013020 280 1.501 - 0.729 - - - 0.772 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
44. exoc3l4 ENSDARG00000058180 923 1.486 - - - 0.771 - 0.715 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
45. ksr2 ENSDARG00000094526 134 1.485 - 0.727 - - - 0.758 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
46. FAM53C FAM53C 769 1.464 - - - - - 0.762 - 0.702 -
47. entpd3 ENSDARG00000035309 263 1.464 - 0.719 - - - 0.745 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
48. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.463 - 0.739 - - - 0.724 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
49. rtn1b ENSDARG00000021143 1682 1.461 - 0.759 - - - 0.702 - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
50. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.461 - 0.728 - - - 0.733 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
51. snap25a ENSDARG00000020609 4537 1.458 - 0.757 - - - 0.701 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
52. syt2a ENSDARG00000025206 681 1.457 - 0.750 - - - 0.707 - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
53. smad7 ENSDARG00000016858 1660 1.456 - - - - - 0.714 0.742 - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
54. ttc9b ENSDARG00000068421 251 1.456 - 0.755 - - - 0.701 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
55. st18 663 1.456 - 0.715 - - - 0.741 - - - suppression of tumorigenicity 18, zinc finger
56. si:dkey-6f10.3 ENSDARG00000093660 116 1.455 - - - - - 0.744 0.711 - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
57. ENSDARG00000086878 ENSDARG00000086878 332 1.454 - 0.719 - - - 0.735 - - -
58. epha2 epha2 538 1.452 - 0.706 - 0.746 - - - - -
59. cacnb4b ENSDARG00000062174 159 1.452 - 0.728 - - - 0.724 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
60. hs3st3l ENSDARG00000059903 184 1.449 - 0.716 - - - 0.733 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
61. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.417 - 0.701 - - - 0.716 - - -
62. chst13 chst13 669 1.416 - - - - - 0.715 0.701 - -
63. scdb ENSDARG00000030265 271 0.981 - 0.981 - - - - - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
64. shhb ENSDARG00000038867 338 0.968 - 0.968 - - - - - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
65. PCDH9 ENSDARG00000063264 1309 0.967 - 0.967 - - - - - - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
66. faima ENSDARG00000005828 154 0.958 - 0.958 - - - - - - - Fas apoptotic inhibitory molecule a [Source:ZFIN;Acc:ZDB-GENE-040718-323]
67. si:dkey-30j22.1 ENSDARG00000042829 25 0.958 - 0.958 - - - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
68. poldip2 ENSDARG00000092305, ENSDARG00000112927, ENSDARG00000117099 88 0.958 - 0.958 - - - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5881]
69. TUBB8P7 TUBB8P7 1353 0.952 - 0.952 - - - - - - -
70. tcap ENSDARG00000007344 276 0.951 - 0.951 - - - - - - - titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
71. scn8aa ENSDARG00000005775 792 0.945 - 0.945 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
72. SNAP91 ENSDARG00000098809 556 0.944 - 0.944 - - - - - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
73. kera ENSDARG00000056938 2434 0.941 - 0.941 - - - - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
74. arhgef11 ENSDARG00000052482 24 0.941 - 0.941 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
75. CHL1 CHL1 1553 0.939 - 0.939 - - - - - - -
76. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.939 - 0.939 - - - - - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
77. sumf2 ENSDARG00000069497 51 0.937 - 0.937 - - - - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
78. atp1a3a ENSDARG00000018259 5393 0.931 - 0.931 - - - - - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
79. slc32a1 ENSDARG00000059775 1092 0.93 - 0.930 - - - - - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
80. SUN2 SUN2 86 0.927 - 0.927 - - - - - - -
81. EFCAB6 ENSDARG00000020735 34 0.927 - 0.927 - - - - - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
82. neurod neurod 1189 0.927 - 0.927 - - - - - - -
83. zgc:113227 ENSDARG00000058874 266 0.927 - 0.927 - - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
84. BX088525.2 ENSDARG00000117222 11 0.927 - 0.927 - - - - - - -
85. ace ENSDARG00000079166 54 0.925 - 0.925 - - - - - - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1826]
86. syngr3b ENSDARG00000025034 290 0.922 - 0.922 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
87. LIMD1_1 LIMD1_1 348 0.919 - 0.919 - - - - - - -
88. arpc5la ENSDARG00000041720 143 0.913 - - - - - - 0.913 - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
89. klc3 ENSDARG00000055965 116 0.905 - 0.905 - - - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
90. SKOR2 SKOR2 1041 0.895 - 0.895 - - - - - - -
91. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 0.894 - 0.894 - - - - - - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
92. CU856539.1 ENSDARG00000010023 190 0.892 - 0.892 - - - - - - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
93. rab24 ENSDARG00000054032 126 0.892 - 0.892 - - - - - - - RAB24, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050706-110]
94. C18H19orf47 C18H19orf47 44 0.891 - 0.891 - - - - - - -
95. lbx1b ENSDARG00000018611 399 0.887 - 0.887 - - - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
96. cacna2d3 ENSDARG00000078760 211 0.885 - 0.885 - - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
97. stx1b ENSDARG00000000503 2724 0.883 - 0.883 - - - - - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
98. rbms3 ENSDARG00000044574 2514 0.882 - - - - - 0.882 - - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
99. adam23a ENSDARG00000062323 580 0.882 - 0.882 - - - - - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
100. ntn1b ENSDARG00000022531 248 0.882 - 0.882 - - - - - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]

There are 1026 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA