Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for samd1b

Gene Name Gene ID Reads Annotation
samd1b ENSDARG00000079062 280 sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]










Genes with expression patterns similar to samd1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. samd1b ENSDARG00000079062 280 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
2. SLC36A4 ENSDARG00000039661 175 2.27 - - 0.746 0.740 - 0.784 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
3. C22H10orf76 C22H10orf76 1103 2.185 0.707 - - - - 0.775 0.703 - -
4. gfra4 gfra4 287 2.182 0.756 0.704 - - - - 0.722 - -
5. si:dkey-228i19.34 si:dkey-228i19.34 43 1.829 - - 0.893 - - - 0.936 - -
6. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 1.806 0.880 - - - - - 0.926 - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
7. utp3 ENSDARG00000056720 922 1.786 - - - - - 0.864 0.922 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
8. C3H17orf104 C3H17orf104 16 1.78 0.907 - 0.873 - - - - - -
9. si:dkey-93m18.3 ENSDARG00000092664 30 1.78 0.833 - - - - - 0.947 - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
10. si:ch211-113a14.29 48 1.776 0.882 - 0.894 - - - - - - si:ch211-113a14.29
11. UIMC1_1 UIMC1_1 430 1.764 - - - - - 0.867 0.897 - -
12. SORT1 SORT1 33 1.758 0.889 - 0.869 - - - - - -
13. fignl1 ENSDARG00000016427 636 1.757 - - - - - 0.884 0.873 - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
14. si:ch211-265m20.8 120 1.752 0.907 - - - - - 0.845 - - si:ch211-265m20.8, transcript variant X1
15. CT956064.4 CT956064.4 541 1.746 - 0.809 - - - - 0.937 - -
16. fstl3 ENSDARG00000025670 41 1.745 - - - - - 0.804 0.941 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
17. chst13 chst13 669 1.744 - - - - - 0.809 0.935 - -
18. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.741 - - - - - 0.813 0.928 - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
19. GPR156 ENSDARG00000086215 126 1.73 0.899 - - - - 0.831 - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
20. arid1ab ENSDARG00000101891 1722 1.716 0.862 - - - - 0.854 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
21. si:dkey-18j14.4 si:dkey-18j14.4 60 1.711 0.877 - - - - - 0.834 - -
22. idua ENSDARG00000062904 105 1.705 0.897 - - - - - 0.808 - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
23. atoh1b ENSDARG00000099564 494 1.7 0.907 - - - - 0.793 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
24. nlgn4a 102 1.692 0.881 0.811 - - - - - - - neuroligin 4a, transcript variant X1
25. CT583625.2 ENSDARG00000094770 57 1.69 0.941 - - - - 0.749 - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
26. pld3 ENSDARG00000068199 205 1.689 - - 0.833 - - 0.856 - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
27. slc17a9b ENSDARG00000011049 231 1.686 0.746 - - - - - 0.940 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
28. cx34.4 ENSDARG00000075854 168 1.678 - - - - - 0.817 0.861 - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
29. CR855306.1 ENSDARG00000099475 102 1.667 0.886 - - - - 0.781 - - -
30. si:dkey-231k6.4 si:dkey-231k6.4 72 1.657 - - 0.853 - - 0.804 - - -
31. kif18a ENSDARG00000008022 546 1.65 - - - - - 0.797 0.853 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
32. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.643 - - 0.850 - - 0.793 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
33. FAM126B 588 1.641 - - - - - 0.796 0.845 - - family with sequence similarity 126 member B
34. si:dkey-23a23.3 ENSDARG00000088214 86 1.641 0.842 - - - - 0.799 - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
35. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.633 - - 0.823 - - 0.810 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
36. sgms2 57 1.631 - - - - - 0.832 0.799 - - sphingomyelin synthase 2, transcript variant X1
37. spata2 ENSDARG00000063250 501 1.628 - - - - - 0.727 0.901 - - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
38. tapbp tapbp 70 1.625 - - 0.809 - - 0.816 - - -
39. CABZ01028403.1 CABZ01028403.1 48 1.618 0.893 - 0.725 - - - - - -
40. CABZ01003022.1 CABZ01003022.1 507 1.614 0.761 - - - - - 0.853 - -
41. pkib ENSDARG00000053110 527 1.612 - 0.772 - - - 0.840 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
42. si:dkey-20j1.4 si:dkey-20j1.4 406 1.59 - 0.831 0.759 - - - - - -
43. pknox2 ENSDARG00000055349 784 1.588 - - 0.787 - - 0.801 - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
44. ppp2r5d ENSDARG00000014428 771 1.585 - - - - - 0.810 0.775 - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
45. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.582 - 0.748 - - - 0.834 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
46. si:dkey-66i24.7 ENSDARG00000096714 308 1.578 - 0.874 - - - - - 0.704 - si:dkey-66i24.7 [Source:ZFIN;Acc:ZDB-GENE-130603-106]
47. furinb ENSDARG00000070971 213 1.576 - - 0.719 - - - 0.857 - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
48. uros ENSDARG00000027491 1147 1.576 - 0.712 - - - 0.864 - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
49. adamtsl7 ENSDARG00000055439 575 1.574 - 0.707 - - - 0.867 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
50. rps6ka1 ENSDARG00000033437 366 1.573 0.767 - - - - - 0.806 - - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
51. dbpa ENSDARG00000063014 107 1.57 0.804 - - - - 0.766 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
52. gfm2 ENSDARG00000005561 302 1.566 0.793 - - 0.773 - - - - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
53. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.563 - - - - - 0.772 0.791 - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
54. pask ENSDARG00000075008 302 1.563 - - 0.845 - - - 0.718 - - PAS domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-1394]
55. CEP152 ENSDARG00000075725 391 1.562 - - 0.810 - - - 0.752 - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
56. lxn ENSDARG00000043102 415 1.555 0.848 - - - - - 0.707 - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
57. map3k10 ENSDARG00000055672 284 1.555 0.738 0.817 - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
58. gnsa ENSDARG00000023766 545 1.549 - 0.810 - - - 0.739 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
59. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.548 0.800 - - - - - 0.748 - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
60. ap4s1 ENSDARG00000054220 346 1.546 - - - 0.732 - - 0.814 - - adaptor related protein complex 4 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-030616-404]
61. orai2 ENSDARG00000035148 330 1.542 - - 0.775 - - 0.767 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
62. ercc2 ENSDARG00000021985 678 1.535 - - - - - 0.737 0.798 - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
63. lyrm5b ENSDARG00000045827 91 1.532 0.813 0.719 - - - - - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
64. KCNJ3_1 KCNJ3_1 30 1.53 - - - - - 0.830 - 0.700 -
65. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 1.529 0.798 - - - - 0.731 - - - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
66. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.517 0.746 0.771 - - - - - - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
67. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 1.517 - - 0.717 - - 0.800 - - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
68. iah1 ENSDARG00000015765 326 1.51 - 0.726 - - - 0.784 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
69. ppp6r2b ENSDARG00000069654 323 1.51 - 0.711 - - - 0.799 - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
70. zgc:154006 ENSDARG00000061797 152 1.509 - 0.728 - - - - 0.781 - - zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
71. ZNF337_18 ZNF337_18 152 1.506 - - 0.729 - - 0.777 - - -
72. syngr1a ENSDARG00000002564 209 1.503 - - - - - 0.725 0.778 - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
73. prelid1b ENSDARG00000044169 501 1.495 - - - - - 0.762 0.733 - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
74. tenm1 ENSDARG00000003403 148 1.49 0.765 - - - - 0.725 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
75. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 1.485 - - 0.729 - - - 0.756 - - F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
76. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.478 - 0.713 - - - 0.765 - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
77. PARP10 PARP10 385 1.472 - - 0.719 - - - 0.753 - -
78. cyp27a7 ENSDARG00000033802 216 1.467 - - - - - 0.765 0.702 - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
79. nup210 ENSDARG00000063333 995 1.461 - - 0.746 - - 0.715 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
80. si:ch211-262h13.3 ENSDARG00000070898 2094 1.457 - - - - - 0.719 0.738 - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
81. tuba2 ENSDARG00000045014 1490 1.456 - 0.704 - - - 0.752 - - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
82. spag1a ENSDARG00000004017 1140 1.454 0.708 - - - - 0.746 - - - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
83. fem1b ENSDARG00000062636 474 1.449 - 0.705 - - - 0.744 - - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
84. TMEM185A TMEM185A 5505 1.449 0.746 - - - - 0.703 - - -
85. mbtps2 ENSDARG00000057577 1285 1.446 - 0.701 - - - - 0.745 - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
86. SNAP23_1 SNAP23_1 613 1.446 - 0.720 - - - - 0.726 - -
87. polr1b ENSDARG00000077469, ENSDARG00000115880 313 1.423 0.717 - 0.706 - - - - - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
88. C3H17orf53 C3H17orf53 191 1.419 - 0.708 0.711 - - - - - -
89. epd ENSDARG00000103498, ENSDARG00000117020 84 0.968 - - - - - - 0.968 - - ependymin [Source:ZFIN;Acc:ZDB-GENE-980526-111]
90. U1_50 U1_50 62 0.966 - - - - - - 0.966 - -
91. asb1 ENSDARG00000026635 166 0.962 0.962 - - - - - - - - ankyrin repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-234]
92. zgc:158463_1 ENSDARG00000089382 23 0.952 0.952 - - - - - - - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
93. HIST1H4H HIST1H4H 26 0.951 0.951 - - - - - - - -
94. s1pr5b ENSDARG00000052192 52 0.95 - - - - - - 0.950 - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
95. sc:d217 ENSDARG00000079645 32 0.949 - - - - - - 0.949 - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
96. C5H2orf42 C5H2orf42 65 0.949 - - - - - - 0.949 - -
97. znf366 ENSDARG00000040116 168 0.948 - - - - - - 0.948 - - zinc finger protein 366 [Source:ZFIN;Acc:ZDB-GENE-110408-46]
98. map1lc3c ENSDARG00000100528 31 0.948 - - - - - - 0.948 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
99. BX548000.1 ENSDARG00000099044 45 0.948 - - - - - - 0.948 - -
100. atp1a1a.2 ENSDARG00000007739 121 0.948 - - - - - - 0.948 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]

There are 1590 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA