Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for samd1a

Gene Name Gene ID Reads Annotation
samd1a ENSDARG00000102810 1037 sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]










Genes with expression patterns similar to samd1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. samd1a ENSDARG00000102810 1037 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
2. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 2.309 - - - 0.778 - - 0.774 0.757 - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
3. sgut1 3470 1.765 0.766 0.999 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
4. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.761 - 0.998 - - - - 0.763 - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
5. LIMA1 LIMA1 908 1.753 - 0.999 - - - - - 0.754 -
6. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.749 - 0.994 - - - - 0.755 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
7. arih2 ENSDARG00000012848 7087 1.737 - 0.991 - - - - 0.746 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
8. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.709 - 0.975 - - - - 0.734 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
9. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.702 - 1.000 - - - - 0.702 - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
10. CABZ01080568.2 CABZ01080568.2 2137 1.573 - - - 0.716 - - 0.857 - -
11. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.556 - - - 0.755 - - - 0.801 - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
12. zdhhc17 ENSDARG00000070441 1073 1.552 - - - 0.852 - - 0.700 - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
13. SMIM13 ENSDARG00000089204, ENSDARG00000113880 457 1.551 - - - 0.774 - - 0.777 - - small integral membrane protein 13 [Source:ZFIN;Acc:ZDB-GENE-141212-279]
14. als2b ENSDARG00000076924 738 1.538 - - - - - - 0.773 0.765 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
15. hdac4 ENSDARG00000098349 1370 1.529 - - - - - - 0.751 0.778 - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
16. dmtn ENSDARG00000013110 791 1.523 - - - - - 0.715 0.808 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
17. MPRIP_1 ENSDARG00000105209 898 1.518 - - - 0.762 - - 0.756 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
18. CABZ01085888.1 CABZ01085888.1 868 1.518 - - - 0.791 - - - 0.727 -
19. nck2b ENSDARG00000043361 908 1.517 - - - 0.743 - - 0.774 - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
20. CDKN1C CDKN1C 667 1.515 - - - 0.800 - - 0.715 - -
21. bcl2_1 bcl2_1 1185 1.512 - - - 0.756 - - 0.756 - -
22. med19b ENSDARG00000009472 936 1.511 - - - 0.776 - - 0.735 - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
23. cox16 ENSDARG00000039136 1066 1.504 - - - 0.731 - - - 0.773 - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
24. btr04 ENSDARG00000060962, ENSDARG00000095113 281 1.502 0.701 - - - - - 0.801 - - bloodthirsty-related gene family, member 4 [Source:ZFIN;Acc:ZDB-GENE-060825-109]
25. ZNF618 ENSDARG00000071469 2347 1.495 - - - 0.738 - - 0.757 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
26. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.493 0.788 - - 0.705 - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
27. fen1 ENSDARG00000011404 3358 1.48 - - - - - - 0.773 0.707 - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
28. srrd ENSDARG00000059028 173 1.478 - - - - 0.763 - 0.715 - - SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]
29. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.475 - - - 0.716 - - 0.759 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
30. rapgef5a ENSDARG00000075271 282 1.472 - - - 0.760 0.712 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
31. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.467 - - - 0.722 - - 0.745 - -
32. prr12a ENSDARG00000074229 1668 1.465 - - - - - - 0.739 0.726 - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
33. rybpa ENSDARG00000037773 904 1.45 - - - 0.702 - - 0.748 - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
34. anapc1 ENSDARG00000075687 488 1.443 - - - 0.735 - - 0.708 - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
35. usp36 ENSDARG00000032327 1884 1.441 - - - - - - 0.733 0.708 - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
36. abcf2a ENSDARG00000038785 2065 1.437 - - - - - - 0.728 0.709 - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
37. rprd2b ENSDARG00000074676 809 1.432 - - - 0.712 - - 0.720 - - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
38. rprd1b ENSDARG00000038113 1105 1.428 - - - - - 0.724 - 0.704 - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
39. ddx27 ENSDARG00000091831 1471 1.423 - - - 0.714 - - 0.709 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
40. mao ENSDARG00000023712 1448 1 - 1.000 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
41. cped1 ENSDARG00000045747 1024 1 - 1.000 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
42. foxo1b ENSDARG00000061549 790 1 - 1.000 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
43. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 1 - 1.000 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
44. rpl3 ENSDARG00000003599 797 1 - 1.000 - - - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
45. tmem209 ENSDARG00000039340 1598 1 - 1.000 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
46. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1 - 1.000 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
47. sh3bp4a ENSDARG00000020000 1049 1 - 1.000 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
48. dnajc3 dnajc3 802 1 - 1.000 - - - - - - -
49. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1 - 1.000 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
50. cep44 ENSDARG00000053106 683 1 - 1.000 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
51. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 0.999 - 0.999 - - - - - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
52. ing2 ENSDARG00000104907 1336 0.999 - 0.999 - - - - - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
53. slc38a10 ENSDARG00000077081 1691 0.999 - 0.999 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
54. socs6b ENSDARG00000015863 1799 0.999 - 0.999 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
55. utp23 ENSDARG00000105012 1346 0.999 - 0.999 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
56. abl1 ENSDARG00000035187 3553 0.999 - 0.999 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
57. nr5a2 ENSDARG00000100940 1488 0.999 - 0.999 - - - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
58. mrpl13 ENSDARG00000056903 2768 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
59. tdh ENSDARG00000002745 5344 0.999 - 0.999 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
60. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.999 - 0.999 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
61. FP102892.2 FP102892.2 809 0.999 - 0.999 - - - - - - -
62. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.999 - 0.999 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
63. pgam5 ENSDARG00000035608 4044 0.999 - 0.999 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
64. tuba1c ENSDARG00000055216 8384 0.999 - 0.999 - - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
65. CR387996.1 ENSDARG00000097774 3037 0.999 - 0.999 - - - - - - -
66. pdxkb ENSDARG00000036546 721 0.999 - 0.999 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
67. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.999 - 0.999 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
68. PLEKHG4 ENSDARG00000075964 2860 0.998 - 0.998 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
69. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.998 - 0.998 - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
70. sdad1 ENSDARG00000105117 2819 0.998 - 0.998 - - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
71. arnt2 ENSDARG00000103697 5731 0.998 - 0.998 - - - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
72. ppp1cab ENSDARG00000071566 4350 0.998 - 0.998 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
73. C20H12orf57 C20H12orf57 3325 0.998 - 0.998 - - - - - - -
74. KLB ENSDARG00000076294 595 0.998 - 0.998 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
75. lum ENSDARG00000045580 5395 0.998 - 0.998 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
76. CR381676.2 CR381676.2 1591 0.998 - 0.998 - - - - - - -
77. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.997 - 0.997 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
78. snrpa1 ENSDARG00000024651 3306 0.997 - 0.997 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
79. myh10 ENSDARG00000000103 7522 0.997 - 0.997 - - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
80. TBC1D24 ENSDARG00000069339 1300 0.997 - 0.997 - - - - - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
81. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.996 - 0.996 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
82. cstf3 ENSDARG00000018904 6111 0.996 - 0.996 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
83. tomm7 ENSDARG00000067717 4452 0.995 - 0.995 - - - - - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
84. mrpl54 ENSDARG00000071468 2715 0.995 - 0.995 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
85. srsf5b ENSDARG00000027734 6996 0.994 - 0.994 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
86. cux1a ENSDARG00000078459 3914 0.994 - 0.994 - - - - - - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
87. igf2bp3 ENSDARG00000010266 5789 0.994 - 0.994 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
88. nme3 ENSDARG00000100990 3889 0.993 - 0.993 - - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
89. NAT16 ENSDARG00000086222 4682 0.993 - 0.993 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
90. nhp2l1b nhp2l1b 3898 0.993 - 0.993 - - - - - - -
91. METTL21C METTL21C 1717 0.992 - 0.992 - - - - - - -
92. col12a1b ENSDARG00000019601 9985 0.992 - 0.992 - - - - - - - collagen, type XII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-120215-116]
93. ubap1 ENSDARG00000058746 1049 0.991 - 0.991 - - - - - - - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
94. nsa2 ENSDARG00000007708 6329 0.991 - 0.991 - - - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
95. ivns1abpa ENSDARG00000031100 3806 0.991 - 0.991 - - - - - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
96. sort1b ENSDARG00000056252 2652 0.989 - 0.989 - - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
97. dhx15 ENSDARG00000015392 7496 0.989 - 0.989 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
98. rbb4 rbb4 15541 0.989 - 0.989 - - - - - - -
99. mgst2 ENSDARG00000071345 5626 0.987 - 0.987 - - - - - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
100. snx12 ENSDARG00000019060 9563 0.987 - 0.987 - - - - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]

There are 996 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA