Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sall4

Gene Name Gene ID Reads Annotation
sall4 ENSDARG00000044485 1694 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]










Genes with expression patterns similar to sall4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sall4 ENSDARG00000044485 1694 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
2. crabp1b ENSDARG00000035904 2753 2.392 - - - 0.789 - 0.774 0.829 - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
3. EMILIN3 1347 2.253 - - 0.735 0.729 - - - - 0.789 elastin microfibril interfacer 3
4. MIS12 ENSDARG00000026454 649 1.744 - - - - - 0.880 - - 0.864 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
5. crabp2a_1 ENSDARG00000073978 888 1.711 - - - - - 0.935 - 0.776 - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
6. casc3 ENSDARG00000029911 1174 1.691 - - - - - 0.864 0.827 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
7. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.689 - - - - - - 0.869 - 0.820 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
8. abcb7 ENSDARG00000062795 1404 1.675 - - - - - 0.854 - - 0.821 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
9. GANAB_2 GANAB_2 3210 1.667 - - - - - 0.863 0.804 - -
10. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.662 - - - - - 0.845 - - 0.817 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
11. fam132a fam132a 498 1.661 - - - - - 0.868 - 0.793 -
12. nradd ENSDARG00000057143 1159 1.649 - - 0.782 - - 0.867 - - - neurotrophin receptor associated death domain [Source:ZFIN;Acc:ZDB-GENE-030131-2537]
13. hoxa13a ENSDARG00000100312 543 1.643 - - - 0.857 - - 0.786 - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
14. CT030712.1 ENSDARG00000044355 83 1.641 - - - - - 0.827 - - 0.814 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
15. uros ENSDARG00000027491 1147 1.64 - - - - - 0.881 0.759 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
16. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.638 - - - - - 0.844 - - 0.794 ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
17. ift57 ENSDARG00000021022 288 1.635 - - - - - 0.856 0.779 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
18. atrip ENSDARG00000063076 385 1.632 - - - - - - 0.809 - 0.823 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
19. CR954145.1 CR954145.1 327 1.629 - - - - - 0.818 - - 0.811
20. wdr43 ENSDARG00000077264 1992 1.628 - - - - - 0.791 - - 0.837 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
21. calhm2 ENSDARG00000039482 138 1.625 - - - - - 0.810 - - 0.815 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
22. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.625 - - - - - 0.760 - - 0.865 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
23. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.623 - - - - - 0.774 - - 0.849 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
24. BX569781.3 BX569781.3 576 1.623 - - - - - - 0.785 - 0.838
25. rnf170 ENSDARG00000104069 838 1.619 - - - - - - 0.798 - 0.821 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
26. sf1 ENSDARG00000008188 5142 1.615 - - - - - 0.878 0.737 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
27. rangap1a ENSDARG00000041317 1456 1.615 - - - - - 0.853 - - 0.762 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
28. BX004880.1 BX004880.1 638 1.613 - - - - - 0.759 - - 0.854
29. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.612 - - - - - 0.792 - - 0.820 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
30. BACH1 BACH1 1021 1.609 - - - - - 0.790 - - 0.819
31. IKZF2 ENSDARG00000069111 1366 1.608 - - - - - - 0.732 - 0.876 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
32. tmem8a ENSDARG00000032795 677 1.608 - - - - - 0.882 0.726 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
33. si:ch211-194k22.8 ENSDARG00000096711 1318 1.608 - - - - - 0.879 0.729 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
34. BX470254.1_1 ENSDARG00000097402 50 1.596 - - - - - 0.878 0.718 - -
35. asnsd1 830 1.595 - - - - - 0.760 0.835 - - asparagine synthetase domain containing 1, transcript variant X1
36. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.594 - - - - - 0.810 - - 0.784 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
37. cdx4 ENSDARG00000036292 1225 1.591 - - 0.709 - - - - - 0.882 caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
38. tapbp tapbp 70 1.589 - - - - - 0.816 0.773 - -
39. CR387996.1 ENSDARG00000097774 3037 1.587 - - - - - 0.869 - - 0.718
40. eve1 ENSDARG00000056012 144 1.582 - - - 0.748 - - - - 0.834 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
41. AIFM2 ENSDARG00000077549 1419 1.577 - - - - - 0.800 0.777 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
42. tbc1d5 ENSDARG00000036212 2580 1.572 - - - - - 0.791 - - 0.781 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
43. lmbrd1 ENSDARG00000104223 924 1.569 - - - - - 0.756 - - 0.813 LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
44. ntd5 ENSDARG00000040944 4988 1.568 - - - 0.839 0.729 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
45. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.568 - - - - - 0.750 0.818 - - DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
46. nf2b ENSDARG00000025567 1441 1.567 - - - - - 0.748 - - 0.819 neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
47. aurkb ENSDARG00000037640 4874 1.566 - - - - - 0.858 - - 0.708 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
48. dennd4c ENSDARG00000102766 897 1.565 - - - - - - 0.764 - 0.801 DENN/MADD domain containing 4C [Source:ZFIN;Acc:ZDB-GENE-120727-13]
49. HEATR6 ENSDARG00000073686 241 1.564 - - - - - 0.825 0.739 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
50. trim71 ENSDARG00000075593 2750 1.557 - - - - - - 0.732 - 0.825 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
51. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.556 - - - - - 0.827 0.729 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
52. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.553 - - - - - 0.842 0.711 - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
53. aebp1 ENSDARG00000091726 906 1.55 - - - - - - 0.743 - 0.807 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
54. smcr8a ENSDARG00000052818 559 1.547 - - - - - 0.822 0.725 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
55. rad54b ENSDARG00000092134 231 1.546 - - - - - 0.793 0.753 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
56. nsmaf ENSDARG00000051920 474 1.546 - - - - - 0.813 0.733 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
57. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.543 - - - - - 0.814 0.729 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
58. TPMT TPMT 138 1.539 - - - - - - 0.704 - 0.835
59. crebbpa ENSDARG00000104609 1739 1.538 - - - - - - 0.790 - 0.748 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
60. grhl3 ENSDARG00000078552 897 1.537 - - - - - - 0.745 - 0.792 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
61. si:ch73-91k6.2 ENSDARG00000091598 727 1.534 - - - - - - 0.703 - 0.831 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
62. GRAMD2 GRAMD2 300 1.534 - - - - - 0.713 - - 0.821
63. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.533 - - - 0.706 - 0.827 - - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
64. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.529 - - - - - - 0.790 - 0.739 phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
65. ruvbl1 ENSDARG00000002591 2381 1.524 - - - - - 0.809 0.715 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
66. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.523 - - - - - - 0.713 - 0.810 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
67. zdhhc8b ENSDARG00000018508 1327 1.522 - - - - - 0.796 0.726 - - zinc finger, DHHC-type containing 8b [Source:ZFIN;Acc:ZDB-GENE-030407-3]
68. chmp3 ENSDARG00000038064 577 1.518 - - - - - 0.768 0.750 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
69. imp4 ENSDARG00000054540 1396 1.516 - - - - - - 0.711 - 0.805 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
70. gdf10b ENSDARG00000073891 116 1.513 - - - 0.745 - - - 0.768 - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
71. si:dkey-286j15.1 ENSDARG00000040864 1718 1.513 - - 0.738 - - - 0.775 - - si:dkey-286j15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-447]
72. rybpb ENSDARG00000053459 1464 1.51 - - - - - 0.722 - - 0.788 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
73. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 1.509 - - - - - 0.712 0.797 - - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
74. prpf6 ENSDARG00000091367 1868 1.503 - - - - - - 0.725 - 0.778 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
75. ppp1r14c ENSDARG00000077341 1587 1.498 - - - - 0.727 0.771 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
76. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.494 - - - - - 0.720 0.774 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
77. MALSU1 MALSU1 1251 1.492 - - - - - 0.755 0.737 - -
78. irx3b ENSDARG00000031138 2538 1.487 - - 0.747 - - 0.740 - - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
79. C13H2orf50 C13H2orf50 87 1.487 - - 0.781 0.706 - - - - -
80. ahctf1 ENSDARG00000077530 2315 1.473 - - - - - 0.761 0.712 - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
81. vangl2 ENSDARG00000027397 2418 1.473 - - - - - 0.743 0.730 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
82. acot13 ENSDARG00000061728, ENSDARG00000114746 516 1.462 - - - - - 0.737 0.725 - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
83. si:dkey-178e17.3 ENSDARG00000058658 271 1.461 - - 0.747 - - 0.714 - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
84. CABZ01012857.1 CABZ01012857.1 78 1.458 - - - 0.730 - 0.728 - - -
85. nck1b ENSDARG00000075369 1596 1.455 - - - - - 0.714 0.741 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
86. trim35-29 ENSDARG00000055730 24 1.454 - - - 0.748 - - - 0.706 - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
87. mkrn4 ENSDARG00000028295 2768 1.454 - - - 0.722 - 0.732 - - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
88. hmox2b ENSDARG00000078452, ENSDARG00000117010 884 1.45 - - - - - 0.722 0.728 - - heme oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-091118-52]
89. fam60al_1 949 1.448 - - - - - 0.725 0.723 - - family with sequence similarity 60, member A, like
90. tes ENSDARG00000051857 2020 1.446 - - - - - 0.741 - - 0.705 testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
91. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.446 - - - - - 0.703 0.743 - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
92. fam49ba ENSDARG00000020929 1980 1.439 - - - - - - 0.718 - 0.721 family with sequence similarity 49, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]
93. cdkl1 ENSDARG00000017329 3345 1.438 - - 0.714 0.724 - - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
94. dhrs13l1 ENSDARG00000098746 102 1.429 - - - - - 0.719 0.710 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
95. suv39h1b ENSDARG00000055753 1540 1.425 - - - - - 0.703 0.722 - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
96. pi15a ENSDARG00000045378 2361 1.419 - - - 0.705 - - - - 0.714 peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
97. MAN2A2 ENSDARG00000063101 922 0.938 - - - - - 0.938 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
98. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.93 - - - - - 0.930 - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
99. hcfc1b ENSDARG00000012519 3633 0.922 - - - - - 0.922 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
100. flrt3 ENSDARG00000076895 3516 0.92 - - - - - 0.920 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]

There are 2063 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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